Ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2) - Rat Genome Database

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Gene: Ndufv2 (NADH:ubiquinone oxidoreductase core subunit V2) Chinchilla lanigera
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Symbol: Ndufv2
Name: NADH:ubiquinone oxidoreductase core subunit V2
RGD ID: 8962982
Description: ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); nervous system development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); cardiomyopathy (ortholog); chromosome 18p deletion syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa; NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554022,800,447 - 2,818,375 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554022,802,366 - 2,818,049 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Ndufv2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554022,800,447 - 2,818,375 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554022,802,366 - 2,818,049 (-)NCBIChiLan1.0ChiLan1.0
NDUFV2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38189,102,699 - 9,134,341 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl189,102,630 - 9,134,345 (+)EnsemblGRCh38hg38GRCh38
GRCh37189,102,697 - 9,134,339 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36189,092,725 - 9,124,336 (+)NCBINCBI36Build 36hg18NCBI36
Build 34189,092,724 - 9,124,336NCBI
Celera188,986,907 - 9,018,629 (+)NCBICelera
Cytogenetic Map18p11.22NCBI
HuRef189,066,364 - 9,098,086 (+)NCBIHuRef
CHM1_1189,102,807 - 9,134,528 (+)NCBICHM1_1
T2T-CHM13v2.0189,266,137 - 9,297,787 (+)NCBIT2T-CHM13v2.0
Ndufv2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391766,385,790 - 66,408,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1766,385,633 - 66,408,554 (-)EnsemblGRCm39 Ensembl
GRCm381766,078,795 - 66,101,559 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1766,078,638 - 66,101,559 (-)EnsemblGRCm38mm10GRCm38
MGSCv371766,428,135 - 66,450,831 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361765,978,338 - 66,002,167 (-)NCBIMGSCv36mm8
Celera1770,387,225 - 70,409,835 (-)NCBICelera
Cytogenetic Map17E1.1NCBI
cM Map1735.26NCBI
Ndufv2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89113,137,305 - 113,157,571 (-)NCBIGRCr8
mRatBN7.29105,690,454 - 105,710,669 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl9105,690,455 - 105,710,713 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9114,099,020 - 114,119,231 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09119,209,076 - 119,229,296 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09117,564,871 - 117,585,084 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09113,875,718 - 113,900,169 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9113,875,703 - 113,900,190 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09113,404,126 - 113,424,677 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.49104,852,714 - 104,873,325 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.19105,062,194 - 105,082,805 (-)NCBI
Celera9103,064,861 - 103,085,059 (-)NCBICelera
Cytogenetic Map9q37NCBI
NDUFV2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21729,318,648 - 29,351,159 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11815,011,243 - 15,043,164 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0185,154,158 - 5,186,088 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1187,433,167 - 7,464,884 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl187,433,167 - 7,464,884 (-)Ensemblpanpan1.1panPan2
NDUFV2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1775,150,293 - 75,184,084 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl775,150,415 - 75,184,067 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha774,541,124 - 74,574,899 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0775,201,712 - 75,235,497 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl775,201,792 - 75,237,756 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1774,901,711 - 74,935,470 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0774,922,508 - 74,956,238 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0775,227,706 - 75,261,510 (+)NCBIUU_Cfam_GSD_1.0
Ndufv2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494472,226,667 - 72,256,804 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366702,742,553 - 2,772,697 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366702,742,553 - 2,772,697 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFV2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl698,815,885 - 98,852,524 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1698,819,156 - 98,852,561 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2692,155,773 - 92,189,212 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFV2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11868,018,120 - 68,052,883 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1868,018,143 - 68,053,634 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605042,967,720 - 43,002,538 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufv2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477017,925,250 - 17,950,754 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000012498   ⟹   ENSCLAP00000012355
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554022,800,447 - 2,818,375 (-)Ensembl
RefSeq Acc Id: XM_013516007   ⟹   XP_013371461
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554022,802,366 - 2,818,049 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013371461 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000012355
  ENSCLAP00000012355.1
RefSeq Acc Id: XP_013371461   ⟸   XM_013516007
- UniProtKB: A0A8C2VBY2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000012355   ⟸   ENSCLAT00000012498


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008537 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000012498 ENTREZGENE
  ENSCLAT00000012498.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.1590 UniProtKB/TrEMBL
  Glutaredoxin UniProtKB/TrEMBL
InterPro NuoE-like UniProtKB/TrEMBL
  NuoE_dom UniProtKB/TrEMBL
  NuoE_N UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
NCBI Gene Ndufv2 ENTREZGENE
PANTHER NADH DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN 2, MITOCHONDRIAL UniProtKB/TrEMBL
  NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam 2Fe-2S_thioredx UniProtKB/TrEMBL
PIRSF NADH_DH_24kDa UniProtKB/TrEMBL
PROSITE COMPLEX1_24K UniProtKB/TrEMBL
Superfamily-SCOP SSF52833 UniProtKB/TrEMBL
UniProt A0A8C2VBY2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Ndufv2  NADH:ubiquinone oxidoreductase core subunit V2    NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa  Symbol and/or name change 5135510 APPROVED