Mtr (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955492 | 3,376,512 - 3,474,180 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955492 | 3,372,915 - 3,474,173 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MTR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 236,795,281 - 236,903,981 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 236,795,260 - 236,921,278 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 236,958,581 - 237,067,281 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 235,025,341 - 235,130,585 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 233,284,758 - 233,390,001 | NCBI | | | | | Celera | 1 | 210,207,757 - 210,316,611 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q43 | NCBI | | | | | HuRef | 1 | 207,414,687 - 207,523,271 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 238,230,032 - 238,338,720 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 236,206,330 - 236,315,021 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mtr (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 13 | 12,196,217 - 12,273,090 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 13 | 12,197,598 - 12,272,999 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 13 | 12,181,331 - 12,258,199 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 13 | 12,182,712 - 12,258,113 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 13 | 12,279,086 - 12,350,267 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 13 | 12,240,869 - 12,312,428 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 13 | 12,106,428 - 12,177,671 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | A1 | NCBI | | | | | cM Map | 13 | 4.52 | NCBI | | | | |
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Mtr (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 17 | 62,911,705 - 62,996,544 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 17 | 58,219,998 - 58,308,560 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 17 | 58,220,071 - 58,304,822 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 17 | 61,408,217 - 61,492,723 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 17 | 65,411,342 - 65,495,846 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 17 | 59,565,531 - 59,650,043 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 17 | 66,210,444 - 66,295,014 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 17 | 66,210,461 - 66,295,014 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 17 | 67,954,893 - 68,041,488 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 17 | 68,782,708 - 68,867,101 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 17 | 68,793,540 - 68,877,930 (+) | NCBI | | | | | Celera | 17 | 62,230,512 - 62,313,601 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q12.1 | NCBI | | | | |
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MTR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 12,253,398 - 12,365,190 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 12,469,507 - 12,584,105 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 212,353,195 - 212,463,304 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 217,352,707 - 217,461,313 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 217,358,050 - 217,460,946 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MTR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 3,219,851 - 3,328,000 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 3,215,090 - 3,328,115 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 3,267,770 - 3,375,365 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 3,240,178 - 3,347,933 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 3,243,029 - 3,347,943 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 3,239,421 - 3,346,967 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 3,370,826 - 3,478,490 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 3,591,890 - 3,699,525 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mtr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 39,925,911 - 40,014,880 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936484 | 16,087,923 - 16,180,148 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936484 | 16,087,924 - 16,180,089 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MTR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 54,546,978 - 54,652,763 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 54,546,978 - 54,652,780 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 58,497,706 - 58,627,105 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MTR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 25 | 73,935,666 - 74,039,872 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 73,935,225 - 74,038,741 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 76,034,340 - 76,141,359 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mtr (Heterocephalus glaber - naked mole-rat) |
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