Ufm1 (ubiquitin fold modifier 1) - Rat Genome Database
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Gene: Ufm1 (ubiquitin fold modifier 1) Chinchilla lanigera
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Symbol: Ufm1
Name: ubiquitin fold modifier 1
RGD ID: 8960833
Description: INVOLVED IN brain development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of protein import into nucleus (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 14 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ubiquitin-fold modifier 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554317,860,706 - 7,872,972 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Ufm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554317,860,706 - 7,872,972 (-)NCBIChiLan1.0ChiLan1.0
UFM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1338,349,849 - 38,363,619 (+)EnsemblGRCh38hg38GRCh38
GRCh381338,349,851 - 38,363,619 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371338,923,988 - 38,937,756 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh371338,923,942 - 38,937,143 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361337,822,018 - 37,835,140 (+)NCBINCBI36hg18NCBI36
Celera1319,977,744 - 19,990,945 (+)NCBI
Cytogenetic Map13q13.3NCBI
HuRef1319,722,742 - 19,735,946 (+)NCBIHuRef
CHM1_11338,891,703 - 38,904,942 (+)NCBICHM1_1
Ufm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39353,760,797 - 53,771,228 (-)NCBIGRCm39mm39
GRCm38353,853,376 - 53,863,807 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl353,853,376 - 53,863,830 (-)EnsemblGRCm38mm10GRCm38
MGSCv37353,659,131 - 53,667,729 (-)NCBIGRCm37mm9NCBIm37
MGSCv36353,943,141 - 53,951,701 (-)NCBImm8
Celera353,576,873 - 53,585,471 (-)NCBICelera
Cytogenetic Map3CNCBI
Ufm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22137,969,476 - 137,977,620 (-)NCBI
Rnor_6.0 Ensembl2143,096,271 - 143,104,412 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02143,096,268 - 143,104,412 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02162,779,816 - 162,788,185 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42143,057,364 - 143,064,329 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,007,998 - 143,014,760 (-)NCBI
Celera2132,453,719 - 132,461,863 (-)NCBICelera
Cytogenetic Map2q26NCBI
UFM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11338,162,598 - 38,175,814 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1338,162,598 - 38,175,814 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01319,571,114 - 19,584,259 (+)NCBIMhudiblu_PPA_v0panPan3
UFM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl252,386,609 - 2,547,311 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1252,427,521 - 2,547,449 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ufm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004937057143,001 - 153,873 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UFM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1113,765,497 - 14,057,370 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11113,516,814 - 13,779,446 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
UFM1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1316,812,925 - 16,826,011 (+)NCBI
ChlSab1.1 Ensembl316,813,148 - 16,823,910 (+)Ensembl
Ufm1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249201,318,468 - 1,477,045 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005387647   ⟹   XP_005387704
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554317,860,706 - 7,872,972 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013515892   ⟹   XP_013371346
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554317,863,947 - 7,872,972 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005387704 (Get FASTA)   NCBI Sequence Viewer  
  XP_013371346 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005387704   ⟸   XM_005387647
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013371346   ⟸   XM_013515892
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013090 ENTREZGENE
Ensembl Protein ENSCLAP00000019107 ENTREZGENE
Ensembl Transcript ENSCLAT00000019292 ENTREZGENE
NCBI Gene Ufm1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-26 Ufm1  ubiquitin fold modifier 1    ubiquitin-fold modifier 1  Symbol and/or name change 5135510 APPROVED