Slc26a10p (Solute carrier family 26 member 10) - Rat Genome Database

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Gene: Slc26a10p (Solute carrier family 26 member 10) Chinchilla lanigera
Analyze
Symbol: Slc26a10p (Ensembl: SLC26A10)
Name: Solute carrier family 26 member 10
RGD ID: 8959863
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Slc26a10; solute carrier family 26, member 10
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,343,332 - 5,351,750 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,343,188 - 5,352,194 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc26a10p
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,343,332 - 5,351,750 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,343,188 - 5,352,194 (+)NCBIChiLan1.0ChiLan1.0
SLC26A10P
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,619,527 - 57,626,151 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,619,527 - 57,626,036 (+)EnsemblGRCh38hg38GRCh38
GRCh371258,013,310 - 58,019,934 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,299,960 - 56,306,201 (+)NCBINCBI36Build 36hg18NCBI36
Build 341256,301,312 - 56,306,200NCBI
Celera1257,669,508 - 57,675,749 (+)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1255,051,378 - 55,057,619 (+)NCBIHuRef
CHM1_11257,981,509 - 57,987,750 (+)NCBICHM1_1
T2T-CHM13v2.01257,587,746 - 57,594,370 (+)NCBIT2T-CHM13v2.0
Slc26a10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,007,262 - 127,016,690 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,007,262 - 127,016,514 (-)EnsemblGRCm39 Ensembl
GRCm3810127,171,393 - 127,180,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,171,393 - 127,180,645 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,609,482 - 126,617,701 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,574,342 - 126,583,531 (-)NCBIMGSCv36mm8
Celera10129,565,459 - 129,573,676 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
Slc26a10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8764,880,694 - 64,890,340 (-)NCBIGRCr8
mRatBN7.2762,995,165 - 63,005,099 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl762,995,381 - 63,004,087 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx764,884,673 - 64,893,388 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,087,077 - 67,095,792 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0766,888,158 - 66,896,871 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,458,528 - 70,469,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,459,532 - 70,467,915 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,636,174 - 70,646,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,127,673 - 67,135,594 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera760,137,647 - 60,145,574 (-)NCBICelera
Cytogenetic Map7q22NCBI
SLC26A10P
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,715,165 - 36,721,012 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,711,936 - 36,719,965 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,300,977 - 31,306,794 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,560,631 - 31,566,215 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,560,657 - 31,566,179 (-)Ensemblpanpan1.1panPan2
SLC26A10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,696,699 - 1,703,571 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl101,696,112 - 1,703,166 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,759,895 - 1,766,759 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,706,075 - 1,712,938 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,706,048 - 1,712,526 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,683,851 - 1,690,715 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,925,568 - 1,932,426 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0102,050,837 - 2,057,701 (+)NCBIUU_Cfam_GSD_1.0
LOC101959649
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,099,902 - 57,107,123 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366461,762,622 - 1,770,325 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC26A10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,882,669 - 22,890,906 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,881,630 - 22,889,552 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,718,107 - 24,725,008 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103238577
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,526,567 - 53,534,193 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,528,388 - 53,533,882 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,427,446 - 192,434,589 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc26a10p
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480210,337,288 - 10,344,821 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000017223   ⟹   ENSCLAP00000017056
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554585,343,332 - 5,351,750 (+)Ensembl
RefSeq Acc Id: XM_005397408   ⟹   XP_005397465
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554585,343,211 - 5,352,194 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520907   ⟹   XP_013376361
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554585,343,210 - 5,352,194 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013520908   ⟹   XP_013376362
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554585,343,188 - 5,351,848 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005397465 (Get FASTA)   NCBI Sequence Viewer  
  XP_013376361 (Get FASTA)   NCBI Sequence Viewer  
  XP_013376362 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000017056
  ENSCLAP00000017056.1
RefSeq Acc Id: XP_005397465   ⟸   XM_005397408
- Peptide Label: isoform X1
- UniProtKB: A0A8C2YR31 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376362   ⟸   XM_013520908
- Peptide Label: isoform X3
- UniProtKB: A0A8C2YR31 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013376361   ⟸   XM_013520907
- Peptide Label: isoform X2
- UniProtKB: A0A8C2YR31 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000017056   ⟸   ENSCLAT00000017223
Protein Domains
STAS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011703 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000017223 ENTREZGENE
  ENSCLAT00000017223.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.750.24 UniProtKB/TrEMBL
InterPro SLC26A/SulP_dom UniProtKB/TrEMBL
  SLC26A/SulP_fam UniProtKB/TrEMBL
  STAS_dom UniProtKB/TrEMBL
  STAS_dom_sf UniProtKB/TrEMBL
NCBI Gene Slc26a10 ENTREZGENE
PANTHER PTHR11814 UniProtKB/TrEMBL
  PTHR11814:SF99 UniProtKB/TrEMBL
Pfam STAS UniProtKB/TrEMBL
  Sulfate_transp UniProtKB/TrEMBL
PROSITE STAS UniProtKB/TrEMBL
Superfamily-SCOP SSF52091 UniProtKB/TrEMBL
UniProt A0A8C2YR31 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-08-09 Slc26a10p  Solute carrier family 26 member 10  Slc26a10  solute carrier family 26 member 10  Symbol and/or name change 5135510 APPROVED
2016-08-16 Slc26a10  solute carrier family 26 member 10    solute carrier family 26, member 10  Symbol and/or name change 5135510 APPROVED