Arv1 (ARV1 homolog, fatty acid homeostasis modulator) - Rat Genome Database
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Gene: Arv1 (ARV1 homolog, fatty acid homeostasis modulator) Chinchilla lanigera
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Symbol: Arv1
Name: ARV1 homolog, fatty acid homeostasis modulator
RGD ID: 8959293
Description: INVOLVED IN bile acid metabolic process (ortholog); regulation of cholesterol metabolic process (ortholog); regulation of intracellular cholesterol transport (ortholog); ASSOCIATED WITH blindness (ortholog); developmental and epileptic encephalopathy 38 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ARV1 homolog; ARV1 homolog, fatty acid homeostatsis modulator
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554927,672,746 - 7,683,728 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554927,669,956 - 7,683,293 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Arv1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554927,672,746 - 7,683,728 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554927,669,956 - 7,683,293 (-)NCBIChiLan1.0ChiLan1.0
ARV1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1230,978,981 - 231,000,733 (+)EnsemblGRCh38hg38GRCh38
GRCh381230,979,082 - 231,000,733 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371231,114,840 - 231,136,479 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh371231,114,823 - 231,136,479 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361229,181,446 - 229,203,102 (+)NCBINCBI36hg18NCBI36
Build 341227,421,557 - 227,443,212NCBI
Celera1204,380,771 - 204,402,432 (+)NCBI
Cytogenetic Map1q42.2NCBI
HuRef1201,599,541 - 201,621,202 (+)NCBIHuRef
CHM1_11232,388,113 - 232,409,767 (+)NCBICHM1_1
Arv1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398125,448,765 - 125,469,533 (+)NCBIGRCm39mm39
GRCm388124,722,026 - 124,742,794 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8124,722,139 - 124,734,123 (+)EnsemblGRCm38mm10GRCm38
MGSCv378127,246,039 - 127,258,023 (+)NCBIGRCm37mm9NCBIm37
MGSCv368127,608,229 - 127,620,213 (+)NCBImm8
Celera8129,027,282 - 129,042,285 (+)NCBICelera
Cytogenetic Map8E2NCBI
Arv1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21952,692,337 - 52,704,156 (+)NCBI
Rnor_6.0 Ensembl1957,484,634 - 57,496,695 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01957,484,720 - 57,496,539 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01968,189,521 - 68,201,340 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41954,904,721 - 54,916,541 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11954,909,646 - 54,921,403 (+)NCBI
Celera1952,060,698 - 52,072,513 (+)NCBICelera
Cytogenetic Map19q12NCBI
ARV1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11211,554,553 - 211,576,484 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1211,554,553 - 211,576,484 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01206,527,777 - 206,549,606 (+)NCBIMhudiblu_PPA_v0panPan3
ARV1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl48,409,484 - 8,424,644 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.148,409,039 - 8,424,776 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Arv1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493648419,551,293 - 19,562,132 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARV1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1459,396,961 - 59,408,958 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11459,396,958 - 59,409,008 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21464,061,498 - 64,073,531 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARV1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12568,251,110 - 68,271,530 (+)NCBI
ChlSab1.1 Ensembl2568,251,130 - 68,271,607 (+)Ensembl
Arv1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477518,634,671 - 18,652,476 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000007733   ⟹   ENSCLAP00000007615
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554927,672,746 - 7,683,728 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000007734   ⟹   ENSCLAP00000007616
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554927,672,748 - 7,683,476 (-)Ensembl
RefSeq Acc Id: XM_005404986   ⟹   XP_005405043
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554927,669,956 - 7,683,293 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005404987   ⟹   XP_005405044
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554927,669,956 - 7,683,293 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405043 (Get FASTA)   NCBI Sequence Viewer  
  XP_005405044 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005405044   ⟸   XM_005404987
- Sequence:
RefSeq Acc Id: XP_005405043   ⟸   XM_005404986
- Sequence:
RefSeq Acc Id: ENSCLAP00000007615   ⟸   ENSCLAT00000007733
RefSeq Acc Id: ENSCLAP00000007616   ⟸   ENSCLAT00000007734


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005346 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000007615 ENTREZGENE
Ensembl Transcript ENSCLAT00000007733 ENTREZGENE
NCBI Gene Arv1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Arv1  ARV1 homolog, fatty acid homeostasis modulator    ARV1 homolog, fatty acid homeostatsis modulator  Symbol and/or name change 5135510 APPROVED
2015-08-25 Arv1  ARV1 homolog, fatty acid homeostatsis modulator    ARV1 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED