Ndufaf2 (NADH:ubiquinone oxidoreductase complex assembly factor 2) - Rat Genome Database

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Gene: Ndufaf2 (NADH:ubiquinone oxidoreductase complex assembly factor 2) Chinchilla lanigera
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Symbol: Ndufaf2
Name: NADH:ubiquinone oxidoreductase complex assembly factor 2
RGD ID: 8955068
Description: ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Cockayne syndrome (ortholog); Cockayne syndrome A (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mimitin, mitochondrial; NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554467,345,467 - 7,439,885 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Ndufaf2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554467,345,467 - 7,439,885 (-)NCBIChiLan1.0ChiLan1.0
NDUFAF2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38560,945,205 - 61,153,026 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl560,945,177 - 61,154,531 (+)EnsemblGRCh38hg38GRCh38
GRCh37560,241,032 - 60,448,853 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36560,276,798 - 60,484,609 (+)NCBINCBI36Build 36hg18NCBI36
Celera557,182,020 - 57,389,876 (+)NCBICelera
Cytogenetic Map5q12.1NCBI
HuRef557,199,067 - 57,407,550 (+)NCBIHuRef
CHM1_1560,240,638 - 60,448,527 (+)NCBICHM1_1
T2T-CHM13v2.0561,761,596 - 61,969,442 (+)NCBIT2T-CHM13v2.0
Ndufaf2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913108,189,123 - 108,295,189 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13108,139,249 - 108,295,157 (-)EnsemblGRCm39 Ensembl
GRCm3813108,052,589 - 108,158,652 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13108,002,715 - 108,158,623 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713108,842,783 - 108,948,819 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613109,173,336 - 109,279,372 (-)NCBIMGSCv36mm8
Celera13112,390,296 - 112,496,090 (-)NCBICelera
Cytogenetic Map13D2.1NCBI
cM Map1359.63NCBI
Ndufaf2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8241,269,141 - 41,380,895 (-)NCBIGRCr8
mRatBN7.2239,535,680 - 39,647,378 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl239,535,689 - 39,647,316 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx246,641,151 - 46,752,431 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0244,699,829 - 44,811,109 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0239,550,564 - 39,661,060 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0239,322,145 - 39,434,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl239,321,741 - 39,434,560 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0258,406,989 - 58,518,870 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4239,269,415 - 39,382,833 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera235,377,806 - 35,489,078 (-)NCBICelera
Cytogenetic Map2q14NCBI
NDUFAF2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2452,754,496 - 52,964,092 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1550,908,131 - 51,117,728 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0552,843,931 - 53,053,671 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1554,484,800 - 54,693,930 (-)NCBIpanpan1.1PanPan1.1panPan2
NDUFAF2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1247,559,002 - 47,706,704 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl247,559,111 - 47,706,696 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha244,634,826 - 44,782,500 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0248,036,173 - 48,183,935 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl248,036,215 - 48,184,975 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1245,106,313 - 45,253,984 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0245,892,845 - 46,040,518 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0246,744,840 - 46,892,527 (+)NCBIUU_Cfam_GSD_1.0
Ndufaf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213198,388,042 - 198,623,479 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364807,382,187 - 7,559,981 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364807,385,986 - 7,559,937 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFAF2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1639,770,466 - 39,950,785 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11639,770,398 - 39,950,786 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21642,832,726 - 42,874,950 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFAF2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1457,128,382 - 57,326,926 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl457,128,385 - 57,326,966 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660495,617,664 - 5,817,388 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufaf2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248158,863,827 - 9,054,453 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248158,862,725 - 9,054,539 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_013518417   ⟹   XP_013373871
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554467,345,467 - 7,439,885 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013518418   ⟹   XP_013373872
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554467,345,467 - 7,400,483 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001235670
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554467,345,467 - 7,409,728 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001235671
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554467,345,467 - 7,409,458 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013373871 (Get FASTA)   NCBI Sequence Viewer  
  XP_013373872 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013373871   ⟸   XM_013518417
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013373872   ⟸   XM_013518418
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Ndufaf2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Ndufaf2  NADH:ubiquinone oxidoreductase complex assembly factor 2    NADH dehydrogenase (ubiquinone) complex I, assembly factor 2  Symbol and/or name change 5135510 APPROVED