Mcur1 (mitochondrial calcium uniporter regulator 1)

Gene: Mcur1 (mitochondrial calcium uniporter regulator 1) Chinchilla lanigera

Analyze

Symbol:

Mcur1

Name:

mitochondrial calcium uniporter regulator 1

RGD ID:

8954629

Description:

INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion import (ortholog); mitochondrial calcium ion transmembrane transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	966,527 - 980,740 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955465	966,537 - 980,740 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium import into the mitochondrion (ISO)

calcium ion import (ISO)

mitochondrial calcium ion transmembrane transport (ISO)

positive regulation of mitochondrial calcium ion concentration (ISO)

Cellular Component

mitochondrial inner membrane (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Mcur1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955465	966,527 - 980,740 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955465	966,537 - 980,740 (+)	NCBI	ChiLan1.0	ChiLan1.0

MCUR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	13,786,557 - 13,814,557 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	13,786,557 - 13,814,568 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	13,786,789 - 13,814,789 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	13,898,999 - 13,922,768 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	13,898,999 - 13,922,779	NCBI
Celera	6	15,030,815 - 15,054,586 (-)	NCBI		Celera
Cytogenetic Map	6	p23	NCBI
HuRef	6	13,731,124 - 13,759,219 (-)	NCBI		HuRef
CHM1_1	6	13,789,148 - 13,817,158 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	13,660,160 - 13,688,158 (-)	NCBI		T2T-CHM13v2.0

Mcur1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	43,691,882 - 43,714,284 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	43,691,869 - 43,713,667 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	43,538,406 - 43,560,344 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	43,538,393 - 43,560,191 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	43,636,928 - 43,655,530 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	43,552,062 - 43,571,187 (-)	NCBI		MGSCv36	mm8
Celera	13	44,620,586 - 44,637,597 (-)	NCBI		Celera
Cytogenetic Map	13	A4	NCBI
cM Map	13	21.6	NCBI

Mcur1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	21,348,490 - 21,365,614 (+)	NCBI		GRCr8
mRatBN7.2	17	21,142,526 - 21,159,651 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	21,141,602 - 21,159,651 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	21,031,299 - 21,048,395 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	22,634,966 - 22,652,063 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	20,958,403 - 20,975,500 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	24,165,259 - 24,182,425 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	24,165,280 - 24,182,425 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	26,111,563 - 26,132,516 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	26,965,022 - 27,002,746 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	26,967,583 - 26,984,987 (+)	NCBI
Celera	17	20,840,513 - 20,857,628 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

MCUR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	28,441,701 - 28,465,752 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	24,431,759 - 24,455,810 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	13,628,421 - 13,657,228 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	13,999,161 - 14,026,753 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	14,003,427 - 14,030,097 (-)	Ensembl	panpan1.1		panPan2

MCUR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	13,188,002 - 13,229,444 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	35	13,151,896 - 13,178,532 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	35	13,301,495 - 13,328,136 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	35	13,126,469 - 13,153,103 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	35	13,178,240 - 13,204,676 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	35	14,503,082 - 14,530,135 (-)	NCBI		UU_Cfam_GSD_1.0

LOC101971016
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405189	48 - 11,764 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004938610	799 - 11,548 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MCUR1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	10,119,546 - 10,142,895 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	10,115,997 - 10,142,897 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	10,552,292 - 10,575,943 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MCUR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	58,334,572 - 58,357,671 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	58,334,347 - 58,361,766 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	13,837,402 - 13,864,386 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mcur1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624756	12,510,284 - 12,528,563 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624756	12,510,165 - 12,536,472 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013521858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01050325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01050326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01027050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01007926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000004476 ⟹ ENSCLAP00000004393

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955465	966,527 - 980,740 (+)	Ensembl

RefSeq Acc Id:

XM_013521858 ⟹ XP_013377312

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955465	966,537 - 980,740 (+)	NCBI

Sequence:

show sequence

CGGGCCGCGCCACCGCCCACGCTCGCCCTCGCCGTCGCACTCGGGGCGCGGAGGCGCGCGGGCG
CCGTGAGCGCGCGCCCGCCCGGGCCAGTGACCGGCTCCGGGATGGACGGCGGCTTGGTCGCGGG
CAAAAGGCCGAAGCGCCCGTCGGATCGCCGGCGCCTCCTGCTGTCCTTGACCGCGGGCCGCTGC
GGAAGCGCGGGCCGCCTCGGAGCCTCCTTGCGCCGCGGCCTCTCCCCGCGGCCCGGCGGGCTGG
GGGCGCTGCGGGCCCGGGGCGGCGCGTCACGCGCGTCGCCGCTGCTCCTCCTCCTGCTCGTGCC
GCCGCCGCGCCGGGCCGCCGCCGCCCCGCGCCGCCCGCTGGCCGACTGGGAGCGCGCGCGCGCC
GGGCCTCAGGCGCCCCCGGCCGGGCGCGGCGCGTGGAGGGGCCCGGCGCGGGGCGGGGCGGCCG
GCGCGCTCCTCCCGGGCCCGACGGCCGCGCGCGCGCCCTGCAGGAGAGAGCTAAGCCTGTCTGC
GCGGTGCCTGCAGCTAGAGCACAAAAGGAGCGATTTCGCCTCATCCGGGAATCGGAAGCTCTTC
TTTGACACCCATGCCTTCGTGTGCTTACTGGAAGGAAACGGGTTTACAACTCAACAAGCAGAAA
TCATTGTGTCTGCATTAGTCAAGATCACGGAGGCCAACACGGACATCGTCTACAAAGACATGGT
CACCAAGGTGCAGCAGGAGATCACTCTTCAGCAAATAATGTCACAGATTGCAAACGTGAAAAAG
GATATGATTATTTTGGAGAAGAGCGAATTTTCAGCCCTCAGAGCAGAAAATGAGAAAACAAAGC
TTGAACTACATCAGTTAAAACAACAAGTAACGGATGAAGTGATCAAAGTCCGAACAGATACCAA
GTTAGACTTCAATCTAGAAAAGAGCAGAGTAAAAGAGTTGTATTCACTGAACGAAAGGAAGCTG
CTGGAACTGAGGACAGAAATAGTAGAATTGCATGCCCAGCAGGATCGGGCCCTGACACAGACAG
ACAGGAAGATAGAAACCGAGGTCGCTGGCCTCAAGACCATGCTCGAAGCGCACAAGCTTGACAC
GATCAAGTATCTAGCAGGGTCTATATTCACCTGCCTAACGGTCGCTCTGGGATTTTACCGCCTG
TGGGTATAATAAAAGGTCTATTTAAAGAGATTTCTATGTTTTGCCTTAAGAATGCCAAACTGTT
GTCCCTTTTTTTCGTATTTCAAATTTTAATCCTGATTTTGACTTAATGAATATTATTTATTTTT
ATGAAAATTGTGGGCATGTAACCGAGATAATGAGGTCAGAAATTCCTTAATCGCTGCTCTCACT
GACTTTATAACCTGGCGTGGACCAGACATCGAAGATCCACTCTGCTGACCAGTGAACGTGGCCA
AGCCAACAAGAAACGTTGGCGTAATTCTCTGCAGTTTCATTTGTCACACTGGGGGCTCGAAGTC
TCCGCGGAAAGGACACGGTGACTTTAACTGCTGAAGAGTCACTGGAACTCAGCCCGCGCCCGGC
TCCTCTTCCCCTGGGGCCCGGTGCTCTGCCGTCCGTTCTTGTGCCGGTGTGGCTCGTTCCCCAC
ACAGCTGTACTCCTCCGCCTCCGTGGTCTCCACTGTCATAGTAAGTTATGCCCCAGTTCCTTTT
AATGTGCCTTCAACCAGAAAATCTTGTTGCCTGATGAAGCCTTGTAATTGTAACGGGGGTCTTT
ACCTCTTAAACGCCAGATTTCCTTTCTTCTCTCCGTCTCTTCTTTCTCTTCCCTTTCCCTCATG
CAAAAACGGTAATAATACTCCACCTGTGCCGCTACCTACCTAGAAAACTTACTCATTCTCGGCA
TGAGTTTATGTTCAAAGTCTGCTTCCTTCGGGCCTTCCTTGGCCTGTGATACAAGGGAGGCACT
CCGCTTTCCCTGTCTAAGCTGTCTGGATGAGGTGGACACTTTTTTATAATGACGCTCGTGCTGT
TAGAAAGCGTGCCTTTGCCTGTGACCAGCTCCAGCTGTACGCTTTCCAGACACAGCAGCCGTGC
CCGGTGCCAGCCTCTGTTCCGCTGATTGCTGCGGTGGTTGAAGACATCTTCACACCTACCTTAC
CTCCGTAATTAAAAAATAAATCCTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_013377312	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004393
	ENSCLAP00000004393.1

RefSeq Acc Id:

XP_013377312 ⟸ XM_013521858

- Sequence:

show sequence

MDGGLVAGKRPKRPSDRRRLLLSLTAGRCGSAGRLGASLRRGLSPRPGGLGALRARGGASRASP
LLLLLLVPPPRRAAAAPRRPLADWERARAGPQAPPAGRGAWRGPARGGAAGALLPGPTAARAPC
RRELSLSARCLQLEHKRSDFASSGNRKLFFDTHAFVCLLEGNGFTTQQAEIIVSALVKITEANT
DIVYKDMVTKVQQEITLQQIMSQIANVKKDMIILEKSEFSALRAENEKTKLELHQLKQQVTDEV
IKVRTDTKLDFNLEKSRVKELYSLNERKLLELRTEIVELHAQQDRALTQTDRKIETEVAGLKTM
LEAHKLDTIKYLAGSIFTCLTVALGFYRLWV

hide sequence

RefSeq Acc Id:

ENSCLAP00000004393 ⟸ ENSCLAT00000004476

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003123	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004476	ENTREZGENE
	ENSCLAT00000004476.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.340	UniProtKB/TrEMBL
InterPro	CCDC90-like	UniProtKB/TrEMBL
NCBI Gene	Mcur1	ENTREZGENE
PANTHER	PTHR14360	UniProtKB/TrEMBL
	PTHR14360:SF11	UniProtKB/TrEMBL
Pfam	DUF1640	UniProtKB/TrEMBL
UniProt	A0A8C2UX10_CHILA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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