Paqr8 (progestin and adipoQ receptor family member 8) - Rat Genome Database

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Gene: Paqr8 (progestin and adipoQ receptor family member 8) Chinchilla lanigera
Analyze
Symbol: Paqr8
Name: progestin and adipoQ receptor family member 8
RGD ID: 8952713
Description: FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: membrane progestin receptor beta; progestin and adipoQ receptor family member VIII
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554115,691,228 - 5,743,438 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Paqr8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554115,691,228 - 5,743,438 (-)NCBIChiLan1.0ChiLan1.0
PAQR8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38652,362,151 - 52,407,777 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl652,361,421 - 52,407,777 (+)EnsemblGRCh38hg38GRCh38
GRCh37652,226,949 - 52,272,575 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36652,334,904 - 52,380,452 (+)NCBINCBI36Build 36hg18NCBI36
Build 34652,334,903 - 52,380,433NCBI
Celera653,888,043 - 53,933,700 (+)NCBICelera
Cytogenetic Map6p12.2NCBI
HuRef652,058,115 - 52,103,855 (+)NCBIHuRef
CHM1_1652,229,162 - 52,274,798 (+)NCBICHM1_1
T2T-CHM13v2.0652,200,912 - 52,246,549 (+)NCBIT2T-CHM13v2.0
Paqr8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39120,960,772 - 21,009,874 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl120,960,830 - 21,009,874 (+)EnsemblGRCm39 Ensembl
GRCm38120,890,548 - 20,939,650 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl120,890,606 - 20,939,650 (+)EnsemblGRCm38mm10GRCm38
MGSCv37120,880,703 - 20,928,837 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36120,875,773 - 20,923,907 (+)NCBIMGSCv36mm8
Celera120,766,586 - 20,813,797 (+)NCBICelera
Cytogenetic Map1A4NCBI
cM Map16.5NCBI
Paqr8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8930,808,921 - 30,858,599 (+)NCBIGRCr8
mRatBN7.2923,312,521 - 23,362,175 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl923,312,585 - 23,362,340 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx931,831,087 - 31,848,080 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0936,951,795 - 36,968,791 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0935,267,072 - 35,284,066 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0927,005,270 - 27,054,591 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl927,034,022 - 27,051,002 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0925,861,614 - 25,910,763 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4919,661,028 - 19,678,009 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1919,658,349 - 19,675,330 (+)NCBI
Celera920,916,570 - 20,933,551 (+)NCBICelera
Cytogenetic Map9q13NCBI
PAQR8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2566,829,976 - 66,875,224 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1662,706,896 - 62,752,151 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0651,914,374 - 51,959,594 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1653,222,169 - 53,227,108 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl653,222,557 - 53,223,621 (+)Ensemblpanpan1.1panPan2
PAQR8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11219,968,950 - 20,059,344 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1220,020,016 - 20,056,008 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1219,865,363 - 19,960,298 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01220,467,706 - 20,562,412 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1220,444,185 - 20,555,641 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11219,972,986 - 20,068,238 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01220,077,327 - 20,171,949 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01220,214,616 - 20,310,431 (+)NCBIUU_Cfam_GSD_1.0
Paqr8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494655,504,214 - 55,544,176 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364768,416,363 - 8,456,740 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364768,414,768 - 8,456,740 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAQR8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl746,104,677 - 46,234,449 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1746,228,478 - 46,231,105 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2752,679,481 - 52,682,108 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PAQR8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11720,096,407 - 20,142,477 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1720,099,906 - 20,100,970 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604452,265,974 - 52,311,895 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Paqr8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248553,693,541 - 3,735,970 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248553,693,582 - 3,735,854 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_005377925   ⟹   XP_005377982
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554115,691,228 - 5,743,438 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005377982 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000025813.1
RefSeq Acc Id: XP_005377982   ⟸   XM_005377925
- UniProtKB: A0A8C2WDH1 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017940 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000026114.1 UniProtKB/TrEMBL
InterPro AdipoR/HlyIII-related UniProtKB/TrEMBL
NCBI Gene Paqr8 ENTREZGENE
PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED UniProtKB/TrEMBL
  MEMBRANE PROGESTIN RECEPTOR BETA UniProtKB/TrEMBL
Pfam HlyIII UniProtKB/TrEMBL
UniProt A0A8C2WDH1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Paqr8  progestin and adipoQ receptor family member 8    progestin and adipoQ receptor family member VIII  Symbol and/or name change 5135510 APPROVED