Aspg (asparaginase) - Rat Genome Database

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Gene: Aspg (asparaginase) Chinchilla lanigera
Analyze
Symbol: Aspg
Name: asparaginase
RGD ID: 8945384
Description: ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); asparaginase activity (ortholog); INVOLVED IN asparagine metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); anemia (ortholog); Charcot-Marie-Tooth disease axonal type 2O (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60 kDa lysophospholipase; asparaginase homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555382,765,104 - 2,785,526 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555382,765,215 - 2,785,390 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Aspg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555382,765,104 - 2,785,526 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555382,765,215 - 2,785,390 (+)NCBIChiLan1.0ChiLan1.0
ASPG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814104,085,700 - 104,115,582 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14104,085,686 - 104,115,582 (+)EnsemblGRCh38hg38GRCh38
GRCh3714104,552,037 - 104,581,919 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3614103,621,801 - 103,648,678 (+)NCBINCBI36Build 36hg18NCBI36
Celera1484,606,252 - 84,633,128 (+)NCBICelera
Cytogenetic Map14q32.33NCBI
HuRef1484,732,013 - 84,758,881 (+)NCBIHuRef
CHM1_114104,490,428 - 104,517,504 (+)NCBICHM1_1
T2T-CHM13v2.01498,322,937 - 98,352,910 (+)NCBIT2T-CHM13v2.0
Aspg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912112,073,117 - 112,094,007 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12112,073,113 - 112,093,993 (+)EnsemblGRCm39 Ensembl
GRCm3812112,106,683 - 112,127,573 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12112,106,679 - 112,127,559 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712113,344,894 - 113,365,784 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612112,554,487 - 112,575,381 (+)NCBIMGSCv36mm8
Celera12113,303,837 - 113,329,491 (+)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1261.14NCBI
Aspg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86136,997,832 - 137,017,417 (+)NCBIGRCr8
mRatBN7.26131,176,727 - 131,196,268 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6131,176,874 - 131,196,268 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6131,349,885 - 131,369,265 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06131,646,851 - 131,666,231 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06131,006,402 - 131,025,782 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06136,682,279 - 136,701,673 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6136,682,126 - 136,701,628 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,692,075 - 145,711,786 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46136,909,407 - 136,928,801 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16136,915,593 - 136,934,988 (+)NCBI
Celera6128,729,464 - 128,748,858 (+)NCBICelera
Cytogenetic Map6q32NCBI
ASPG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215105,244,431 - 105,272,292 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114104,460,933 - 104,488,793 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01484,711,400 - 84,739,769 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114104,517,278 - 104,544,589 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14104,517,278 - 104,544,589 (+)Ensemblpanpan1.1panPan2
ASPG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1871,747,319 - 71,764,570 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl871,753,164 - 71,765,349 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha871,256,632 - 71,279,134 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0872,022,962 - 72,051,699 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1871,711,394 - 71,740,236 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0871,752,029 - 71,780,930 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0872,150,669 - 72,179,628 (+)NCBIUU_Cfam_GSD_1.0
Aspg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086402,312,411 - 2,334,699 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366211,140,658 - 1,163,589 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366211,140,651 - 1,163,608 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASPG
(Sus scrofa - pig)
No map positions available.
ASPG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12482,021,590 - 82,049,281 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2482,021,726 - 82,049,355 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605369,348,460 - 69,375,985 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aspg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624734931,946 - 950,553 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624734932,877 - 950,509 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000010681   ⟹   ENSCLAP00000010550
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555382,765,104 - 2,785,526 (+)Ensembl
RefSeq Acc Id: XM_005410824   ⟹   XP_005410881
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,765,550 - 2,785,390 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005410825   ⟹   XP_005410882
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,765,551 - 2,785,390 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005410826   ⟹   XP_005410883
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,765,215 - 2,785,390 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005410827   ⟹   XP_005410884
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,766,642 - 2,785,390 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001232094
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,765,548 - 2,783,337 (+)NCBI
Sequence:
RefSeq Acc Id: XR_264804
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555382,765,548 - 2,783,332 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005410881 (Get FASTA)   NCBI Sequence Viewer  
  XP_005410882 (Get FASTA)   NCBI Sequence Viewer  
  XP_005410883 (Get FASTA)   NCBI Sequence Viewer  
  XP_005410884 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000010550
  ENSCLAP00000010550.1
RefSeq Acc Id: XP_005410883   ⟸   XM_005410826
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005410881   ⟸   XM_005410824
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005410882   ⟸   XM_005410825
- Peptide Label: isoform X2
- UniProtKB: A0A8C2V618 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005410884   ⟸   XM_005410827
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSCLAP00000010550   ⟸   ENSCLAT00000010681

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007283 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000010681 ENTREZGENE
  ENSCLAT00000010681.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  3.40.50.1170 UniProtKB/TrEMBL
  3.40.50.40 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Asp/glu_Ase-like_sf UniProtKB/TrEMBL
  Asparaginase/glutaminase-like UniProtKB/TrEMBL
  Asparaginase/glutaminase_AS2 UniProtKB/TrEMBL
  Asparaginase_C UniProtKB/TrEMBL
  L-asparaginase_C UniProtKB/TrEMBL
  L-asparaginase_I UniProtKB/TrEMBL
  L-asparaginase_N UniProtKB/TrEMBL
  L-asparaginase_N_sf UniProtKB/TrEMBL
NCBI Gene Aspg ENTREZGENE
PANTHER 60 KDA LYSOPHOSPHOLIPASE UniProtKB/TrEMBL
  L-ASPARAGINASE UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  Asparaginase UniProtKB/TrEMBL
  Asparaginase_C UniProtKB/TrEMBL
PIRSF L-ASNase_gatD UniProtKB/TrEMBL
  L_ASNase UniProtKB/TrEMBL
PRINTS ASNGLNASE UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  ASN_GLN_ASE_2 UniProtKB/TrEMBL
  ASN_GLN_ASE_3 UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  Asparaginase UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
  SSF53774 UniProtKB/TrEMBL
UniProt A0A8C2V618 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 Aspg  asparaginase    asparaginase homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED