Renbp (renin binding protein) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Renbp (renin binding protein) Chinchilla lanigera
Analyze
Symbol: Renbp
Name: renin binding protein
RGD ID: 8943463
Description: ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); COVID-19 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N-acylglucosamine 2-epimerase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580609,964 - 615,027 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580610,112 - 615,019 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data
Renbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580609,964 - 615,027 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580610,112 - 615,019 (-)NCBIChiLan1.0ChiLan1.0
RENBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,935,269 - 153,944,643 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 EnsemblX153,935,269 - 153,944,687 (-)EnsemblGRCh38hg38GRCh38
GRCh37X153,200,722 - 153,210,095 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,853,917 - 152,863,426 (-)NCBINCBI36hg18NCBI36
Build 34X152,721,569 - 152,731,079NCBI
CeleraX153,434,439 - 153,443,945 (-)NCBI
Cytogenetic MapXq28NCBI
HuRefX141,853,485 - 141,862,600 (-)NCBIHuRef
CHM1_1X153,075,217 - 153,084,644 (-)NCBICHM1_1
T2T-CHM13v2.0X152,208,986 - 152,218,361 (-)NCBI
Renbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,965,727 - 72,974,465 (-)NCBIGRCm39mm39
GRCm39 EnsemblX72,965,727 - 72,974,456 (-)Ensembl
GRCm38X73,922,121 - 73,930,850 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,922,121 - 73,930,850 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X71,167,460 - 71,176,189 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X70,174,842 - 70,183,538 (-)NCBImm8
CeleraX65,174,555 - 65,183,285 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.49NCBI
Renbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X151,661,463 - 151,670,538 (-)NCBImRatBN7.2
mRatBN7.2 EnsemblX151,661,458 - 151,670,516 (-)Ensembl
Rnor_6.0X156,854,490 - 156,863,548 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,854,594 - 156,863,528 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01152,602,562 - 152,611,616 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,849,355 - 159,858,288 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X159,924,790 - 159,933,724 (-)NCBI
Celera1136,221,770 - 136,230,703 (+)NCBICelera
Cytogenetic MapXq37NCBI
RENBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X153,376,853 - 153,386,214 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,376,847 - 153,386,214 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X143,490,103 - 143,499,487 (-)NCBIMhudiblu_PPA_v0panPan3
RENBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,782,411 - 121,788,928 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,727,573 - 121,788,860 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX107,111,170 - 107,117,703 (-)NCBI
ROS_Cfam_1.0X124,923,691 - 124,930,226 (-)NCBI
ROS_Cfam_1.0 EnsemblX124,918,987 - 124,930,159 (-)Ensembl
UMICH_Zoey_3.1X120,692,968 - 120,699,499 (-)NCBI
UNSW_CanFamBas_1.0X123,208,364 - 123,214,895 (-)NCBI
UU_Cfam_GSD_1.0X122,969,701 - 122,976,234 (-)NCBI
LOC101971758
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X119,079,621 - 119,086,182 (-)NCBI
SpeTri2.0NW_004936809817,392 - 823,926 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RENBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,662,719 - 124,672,235 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,662,957 - 124,670,522 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X142,227,781 - 142,235,348 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103232810
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X128,359,313 - 128,369,070 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 EnsemblX128,359,396 - 128,368,581 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606566,229,335 - 66,239,931 (-)NCBIVero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005464   ⟹   ENSCLAP00000005368
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955580609,964 - 615,027 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000005465   ⟹   ENSCLAP00000005369
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955580609,964 - 615,027 (-)Ensembl
RefSeq Acc Id: XM_013509702   ⟹   XP_013365156
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955580610,112 - 615,019 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013365156 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013365156   ⟸   XM_013509702
- Sequence:
RefSeq Acc Id: ENSCLAP00000005368   ⟸   ENSCLAT00000005464
RefSeq Acc Id: ENSCLAP00000005369   ⟸   ENSCLAT00000005465


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003810 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000005368.1 UniProtKB/TrEMBL
  ENSCLAP00000005369 ENTREZGENE
  ENSCLAP00000005369.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005464.1 UniProtKB/TrEMBL
  ENSCLAT00000005465 ENTREZGENE
  ENSCLAT00000005465.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.10.10 UniProtKB/TrEMBL
InterPro 6-hairpin_glycosidase_sf UniProtKB/TrEMBL
  6hp_glycosidase-like_sf UniProtKB/TrEMBL
  AGE_dom UniProtKB/TrEMBL
NCBI Gene Renbp ENTREZGENE
Superfamily-SCOP SSF48208 UniProtKB/TrEMBL
UniProt A0A8C2UVD5_CHILA UniProtKB/TrEMBL