Znf341 (zinc finger protein 341) - Rat Genome Database

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Gene: Znf341 (zinc finger protein 341) Chinchilla lanigera
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Symbol: Znf341
Name: zinc finger protein 341
RGD ID: 8942833
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); ASSOCIATED WITH hyper IgE recurrent infection syndrome 3 (ortholog); long QT syndrome (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542227,537,917 - 27,583,711 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542227,537,293 - 27,583,713 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (ISO)

Molecular Function

References


Genomics

Comparative Map Data
Znf341
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542227,537,917 - 27,583,711 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542227,537,293 - 27,583,713 (-)NCBIChiLan1.0ChiLan1.0
ZNF341
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2033,731,657 - 33,792,269 (+)EnsemblGRCh38hg38GRCh38
GRCh382033,731,657 - 33,792,269 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372032,319,802 - 32,380,075 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362031,783,469 - 31,843,736 (+)NCBINCBI36hg18NCBI36
Build 342031,783,468 - 31,843,736NCBI
Celera2029,072,525 - 29,132,795 (+)NCBI
Cytogenetic Map20q11.22NCBI
HuRef2029,105,231 - 29,164,875 (+)NCBIHuRef
CHM1_12032,220,946 - 32,281,398 (+)NCBICHM1_1
Zfp341
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392154,453,736 - 154,488,741 (+)NCBIGRCm39mm39
GRCm39 Ensembl2154,455,217 - 154,488,741 (+)Ensembl
GRCm382154,611,816 - 154,646,821 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2154,613,297 - 154,646,821 (+)EnsemblGRCm38mm10GRCm38
MGSCv372154,439,104 - 154,472,553 (+)NCBIGRCm37mm9NCBIm37
MGSCv362154,304,809 - 154,338,258 (+)NCBImm8
MGSCv362155,440,850 - 155,474,283 (+)NCBImm8
Celera2160,541,217 - 160,566,229 (+)NCBICelera
Cytogenetic Map2H1NCBI
Zfp341
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23143,122,699 - 143,156,250 (+)NCBI
Rnor_6.03150,114,853 - 150,172,425 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03156,511,320 - 156,544,251 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43145,086,839 - 145,105,846 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3141,855,266 - 141,888,862 (+)NCBICelera
Cytogenetic Map3q41NCBI
ZNF341
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12031,166,374 - 31,218,282 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2031,164,597 - 31,218,282 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02030,018,348 - 30,079,721 (+)NCBIMhudiblu_PPA_v0panPan3
ZNF341
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12422,937,990 - 22,984,646 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2422,938,093 - 22,982,367 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2422,583,240 - 22,629,894 (+)NCBI
ROS_Cfam_1.02423,624,867 - 23,671,552 (+)NCBI
UMICH_Zoey_3.12422,917,225 - 22,963,979 (+)NCBI
UNSW_CanFamBas_1.02423,010,745 - 23,057,362 (+)NCBI
UU_Cfam_GSD_1.02423,441,838 - 23,462,455 (+)NCBI
UU_Cfam_GSD_1.02423,488,954 - 23,494,847 (+)NCBI
Znf341
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640171,894,730 - 171,933,200 (+)NCBI
SpeTri2.0NW_0049365616,816,349 - 6,851,609 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF341
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1737,224,029 - 37,280,118 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11737,223,959 - 37,272,263 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21742,186,197 - 42,200,711 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF341
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1238,020,915 - 38,081,559 (+)NCBI
ChlSab1.1 Ensembl238,028,765 - 38,080,814 (+)Ensembl
Znf341
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248425,518,327 - 5,565,661 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000024846   ⟹   ENSCLAP00000024609
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542227,537,917 - 27,583,711 (-)Ensembl
RefSeq Acc Id: XM_013514211   ⟹   XP_013369665
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542227,537,293 - 27,583,713 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013369665 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013369665   ⟸   XM_013514211
- Sequence:
RefSeq Acc Id: ENSCLAP00000024609   ⟸   ENSCLAT00000024846


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016902 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000024609 ENTREZGENE
Ensembl Transcript ENSCLAT00000024846 ENTREZGENE
NCBI Gene Znf341 ENTREZGENE