Etfbkmt (electron transfer flavoprotein subunit beta lysine methyltransferase) - Rat Genome Database

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Gene: Etfbkmt (electron transfer flavoprotein subunit beta lysine methyltransferase) Chinchilla lanigera
Analyze
Symbol: Etfbkmt
Name: electron transfer flavoprotein subunit beta lysine methyltransferase
RGD ID: 8939945
Description: ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: electron transfer flavoprotein beta subunit lysine methyltransferase; methyltransferase like 20; Mettl20
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541135,999,583 - 36,025,805 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Etfbkmt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541135,999,583 - 36,025,805 (+)NCBIChiLan1.0ChiLan1.0
ETFBKMT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381231,647,160 - 31,673,114 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1231,647,160 - 31,673,114 (+)EnsemblGRCh38hg38GRCh38
GRCh371231,800,094 - 31,826,048 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361231,703,388 - 31,713,168 (+)NCBINCBI36Build 36hg18NCBI36
Celera1211,622,361 - 11,644,279 (+)NCBICelera
Cytogenetic Map12p11.21NCBI
HuRef1231,552,599 - 31,574,790 (+)NCBIHuRef
CHM1_11231,765,730 - 31,787,988 (+)NCBICHM1_1
T2T-CHM13v2.01231,523,671 - 31,549,944 (+)NCBIT2T-CHM13v2.0
Etfbkmt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396149,042,980 - 149,052,669 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6149,041,347 - 149,052,669 (+)EnsemblGRCm39 Ensembl
GRCm386149,141,476 - 149,151,171 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6149,139,849 - 149,151,171 (+)EnsemblGRCm38mm10GRCm38
MGSCv376149,090,119 - 149,099,693 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366149,098,767 - 149,108,341 (+)NCBIMGSCv36mm8
Celera6152,181,698 - 152,191,250 (+)NCBICelera
Cytogenetic Map6G3NCBI
cM Map678.8NCBI
Etfbkmt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84183,871,819 - 183,936,843 (+)NCBIGRCr8
mRatBN7.24182,140,492 - 182,204,635 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4182,140,559 - 182,150,305 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4188,421,028 - 188,430,757 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04184,205,559 - 184,215,287 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04182,826,055 - 182,835,784 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04183,655,968 - 183,665,757 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4183,656,013 - 183,665,754 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04247,781,128 - 247,860,740 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44186,570,750 - 186,580,489 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14186,815,873 - 186,825,621 (+)NCBI
Celera4170,606,515 - 170,616,245 (+)NCBICelera
Cytogenetic Map4q44NCBI
ETFBKMT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21065,100,292 - 65,115,983 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11265,100,037 - 65,112,401 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01254,570,372 - 54,586,751 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11257,157,771 - 57,172,960 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1257,161,781 - 57,172,705 (-)Ensemblpanpan1.1panPan2
ETFBKMT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12717,103,168 - 17,110,405 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2717,103,210 - 17,165,828 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2729,307,366 - 29,316,228 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02717,282,441 - 17,291,321 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2717,284,117 - 17,289,687 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12717,094,544 - 17,101,717 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02717,125,321 - 17,134,185 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02729,460,638 - 29,467,804 (+)NCBIUU_Cfam_GSD_1.0
Etfbkmt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494577,700,471 - 77,707,880 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366074,532,230 - 4,541,283 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366074,533,607 - 4,541,230 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ETFBKMT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1542,568,131 - 42,575,983 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ETFBKMT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11131,122,358 - 31,147,473 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1131,134,559 - 31,147,174 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660693,827,222 - 3,844,457 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Etfbkmt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624933958,332 - 970,785 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005377897   ⟹   XP_005377954
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541135,999,583 - 36,006,331 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005377898   ⟹   XP_005377955
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541135,999,583 - 36,006,331 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005377899   ⟹   XP_005377956
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541135,999,583 - 36,025,805 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005377900   ⟹   XP_005377957
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541135,999,603 - 36,006,331 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001232832
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541135,999,583 - 36,020,595 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005377954 (Get FASTA)   NCBI Sequence Viewer  
  XP_005377955 (Get FASTA)   NCBI Sequence Viewer  
  XP_005377956 (Get FASTA)   NCBI Sequence Viewer  
  XP_005377957 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000018445
  ENSCLAP00000018445.1
Reference Protein Sequences
RefSeq Acc Id: XP_005377956   ⟸   XM_005377899
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005377954   ⟸   XM_005377897
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VU65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005377955   ⟸   XM_005377898
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005377957   ⟸   XM_005377900
- Peptide Label: isoform X1
- UniProtKB: A0A8C2VU65 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012652 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000018626 ENTREZGENE
  ENSCLAT00000018626.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.150 UniProtKB/TrEMBL
InterPro SAM-dependent_MTases UniProtKB/TrEMBL
NCBI Gene LOC102028280 ENTREZGENE
PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE UniProtKB/TrEMBL
  ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE UniProtKB/TrEMBL
Pfam PrmA UniProtKB/TrEMBL
Superfamily-SCOP SSF53335 UniProtKB/TrEMBL
UniProt A0A8C2VU65 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 Etfbkmt  electron transfer flavoprotein subunit beta lysine methyltransferase    electron transfer flavoprotein beta subunit lysine methyltransferase  Symbol and/or name change 5135510 APPROVED
2016-08-03 Etfbkmt  electron transfer flavoprotein beta subunit lysine methyltransferase  Mettl20  methyltransferase like 20  Symbol and/or name change 5135510 APPROVED
2015-08-25 Mettl20  methyltransferase like 20  LOC102028280  methyltransferase-like protein 20-like  Symbol and/or name change 5135510 APPROVED