Dynlt1 (dynein light chain Tctex-type 1) - Rat Genome Database

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Gene: Dynlt1 (dynein light chain Tctex-type 1) Chinchilla lanigera
Analyze
Symbol: Dynlt1
Name: dynein light chain Tctex-type 1
RGD ID: 8937564
Description: ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN axon development (ortholog); dendrite development (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN axonal growth cone (ortholog); cell body (ortholog); cytoplasmic dynein complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dynein, light chain, Tctex-type 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554393,833,525 - 3,842,393 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554393,833,525 - 3,842,393 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Dynlt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554393,833,525 - 3,842,393 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554393,833,525 - 3,842,393 (+)NCBIChiLan1.0ChiLan1.0
DYNLT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl6158,636,474 - 158,644,743 (-)EnsemblGRCh38hg38GRCh38
GRCh386158,636,474 - 158,644,743 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh376159,057,506 - 159,065,775 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366158,977,497 - 158,985,728 (-)NCBINCBI36hg18NCBI36
Build 346159,027,914 - 159,036,149NCBI
Celera6159,705,500 - 159,713,799 (-)NCBI
Cytogenetic Map6q25.3NCBI
HuRef6156,528,404 - 156,536,700 (-)NCBIHuRef
CHM1_16159,320,069 - 159,328,365 (-)NCBICHM1_1
Dynlt1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39176,697,511 - 6,703,695 (+)NCBIGRCm39mm39
GRCm39 Ensembl176,697,511 - 6,703,695 (+)Ensembl
GRCm38176,429,530 - 6,440,500 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl176,306,340 - 6,317,500 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl176,430,112 - 6,436,296 (+)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl176,646,602 - 6,655,900 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl176,601,671 - 6,609,774 (+)EnsemblGRCm38mm10GRCm38
MGSCv37176,429,260 - 6,435,444 (+)NCBIGRCm37mm9NCBIm37
MGSCv36176,412,303 - 6,418,495 (-)NCBImm8
Cytogenetic Map17A1NCBI
cM Map173.97NCBI
Dynlt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2146,887,017 - 46,893,956 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl146,887,017 - 46,893,881 (-)Ensembl
Rnor_6.0147,206,892 - 47,213,785 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl147,206,895 - 47,213,749 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0148,510,103 - 48,516,996 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,097,174 - 41,103,997 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1141,100,118 - 41,106,942 (-)NCBI
Celera142,574,662 - 42,581,485 (-)NCBICelera
Cytogenetic Map1q11NCBI
DYNLT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16161,544,128 - 161,552,391 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v06156,530,068 - 156,538,346 (-)NCBIMhudiblu_PPA_v0panPan3
DYNLT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1148,058,804 - 48,066,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl148,058,804 - 48,066,609 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha148,903,907 - 48,911,551 (-)NCBI
ROS_Cfam_1.0148,244,957 - 48,252,653 (-)NCBI
ROS_Cfam_1.0 Ensembl148,244,957 - 48,253,247 (-)Ensembl
UMICH_Zoey_3.1148,121,663 - 48,129,302 (-)NCBI
UNSW_CanFamBas_1.0147,992,244 - 47,999,994 (-)NCBI
UU_Cfam_GSD_1.0148,551,864 - 48,559,503 (-)NCBI
Dynlt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946143,077,230 - 143,083,807 (-)NCBI
SpeTri2.0NW_00493648910,329,223 - 10,335,758 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DYNLT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl18,556,059 - 8,563,679 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.118,556,083 - 8,562,865 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2110,385,073 - 10,391,588 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DYNLT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11386,210,462 - 86,218,002 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1386,210,465 - 86,217,956 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604058,592,316 - 58,599,872 (-)NCBIVero_WHO_p1.0
Dynlt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624929969,294 - 976,420 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000002958   ⟹   ENSCLAP00000002901
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554393,833,525 - 3,842,393 (+)Ensembl
RefSeq Acc Id: XM_005390519   ⟹   XP_005390576
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554393,833,525 - 3,842,393 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005390576 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005390576   ⟸   XM_005390519
- Sequence:
RefSeq Acc Id: ENSCLAP00000002901   ⟸   ENSCLAT00000002958


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002086 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000002901 ENTREZGENE
Ensembl Transcript ENSCLAT00000002958 ENTREZGENE
NCBI Gene Dynlt1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Dynlt1  dynein light chain Tctex-type 1    dynein, light chain, Tctex-type 1  Symbol and/or name change 5135510 APPROVED