Ngf (nerve growth factor) - Rat Genome Database

Name: Ngf
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Ngf (nerve growth factor) Chinchilla lanigera

Analyze

Symbol:

Ngf

Name:

nerve growth factor

RGD ID:

8930299

Description:

ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); death receptor agonist activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN activation of cysteine-type endopeptidase activity involved in apoptotic process (ortholog); adult locomotory behavior (ortholog); aging (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN extracellular space (ortholog); neuron projection terminus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

beta-nerve growth factor; nerve growth factor (beta polypeptide)

RGD Orthologs

Human

Mouse

Rat

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NGF (nerve growth factor)	NCBI	Ortholog
Mus musculus (house mouse):	Ngf (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ngf (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NGF (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NGF (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ngf (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NGF (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	NGF (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ngf (nerve growth factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	18,581,808 - 18,601,059 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	18,581,889 - 18,633,330 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

Alzheimer's disease (ISO)

amnestic disorder (ISO)

asthma (ISO)

atherosclerosis (ISO)

atopic dermatitis (ISO)

bacterial meningitis (ISO)

bladder disease (ISO)

bladder neck obstruction (ISO)

Bronchial Hyperreactivity (ISO)

Burns (ISO)

Charcot-Marie-Tooth disease (ISO)

chronic kidney disease (ISO)

Chronic Pancreatitis (ISO)

chronic ulcer of skin (ISO)

Cocaine-Related Disorders (ISO)

corneal ulcer (ISO)

coronary artery disease (ISO)

cystitis (ISO)

degenerative disc disease (ISO)

diabetic encephalopathy (ISO)

diabetic neuropathy (ISO)

diabetic retinopathy (ISO)

end stage renal disease (ISO)

epilepsy with generalized tonic-clonic seizures (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Diabetes Mellitus (ISO)

glaucoma (ISO)

glomerulonephritis (ISO)

hereditary sensory and autonomic neuropathy type 5 (ISO)

hereditary sensory neuropathy (ISO)

heroin dependence (ISO)

Hyperalgesia (ISO)

hyperhomocysteinemia (ISO)

Hyperkinesis (ISO)

hypertension (ISO)

hypothyroidism (ISO)

IgA glomerulonephritis (ISO)

Inflammation (ISO)

interstitial cystitis (ISO)

interstitial lung disease (ISO)

interstitial nephritis (ISO)

Lewy body dementia (ISO)

Lung Injury (ISO)

malignant mesothelioma (ISO)

mental depression (ISO)

Metabolic Syndrome (ISO)

middle cerebral artery infarction (ISO)

myofascial pain syndrome (ISO)

Nerve Degeneration (ISO)

nervous system disease (ISO)

Neurobehavioral Manifestations (ISO)

neurodegenerative disease (ISO)

neurogenic bladder (ISO)

Neurogenic Inflammation (ISO)

obstructive sleep apnea (ISO)

Overactive Urinary Bladder (ISO)

Pain (ISO)

Parkinson's disease (ISO)

Parkinsonian Disorders (ISO)

Peripheral Nerve Injuries (ISO)

peripheral nervous system disease (ISO)

pulmonary fibrosis (ISO)

pulmonary sarcoidosis (ISO)

respiratory syncytial virus infectious disease (ISO)

retinitis pigmentosa (ISO)

rhinitis (ISO)

Rib Fractures (ISO)

sciatic neuropathy (ISO)

sensorineural hearing loss (ISO)

Spinal Cord Injuries (ISO)

status epilepticus (ISO)

Stroke (ISO)

systemic scleroderma (ISO)

visual epilepsy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of cysteine-type endopeptidase activity involved in apoptotic process (ISO)

adult locomotory behavior (ISO)

aging (ISO)

circadian rhythm (ISO)

extrinsic apoptotic signaling pathway in absence of ligand (ISO)

extrinsic apoptotic signaling pathway via death domain receptors (ISO)

inflammatory response (ISO)

memory (ISO)

negative regulation of neuron apoptotic process (ISO)

negative regulation of type B pancreatic cell apoptotic process (ISO)

nerve growth factor signaling pathway (ISO)

neuron apoptotic process (ISO)

neuron development (ISO)

neuron projection development (ISO)

neuron projection morphogenesis (ISO)

peripheral nervous system development (ISO)

positive regulation of axon extension (ISO)

positive regulation of cell growth (ISO)

positive regulation of cell population proliferation (ISO)

positive regulation of collateral sprouting (ISO)

positive regulation of DNA binding (ISO)

positive regulation of DNA-binding transcription factor activity (ISO)

positive regulation of ERK1 and ERK2 cascade (ISO)

positive regulation of gene expression (ISO)

positive regulation of neuron differentiation (ISO)

positive regulation of neuron maturation (ISO)

positive regulation of neuron projection development (ISO)

positive regulation of neurotrophin TRK receptor signaling pathway (ISO)

positive regulation of protein autophosphorylation (ISO)

positive regulation of protein binding (ISO)

positive regulation of protein phosphorylation (ISO)

positive regulation of protein ubiquitination (ISO)

positive regulation of Ras protein signal transduction (ISO)

positive regulation of stem cell proliferation (ISO)

regulation of neuron differentiation (ISO)

regulation of neurotransmitter secretion (ISO)

regulation of release of sequestered calcium ion into cytosol (ISO)

response to drug (ISO)

response to electrical stimulus (ISO)

response to glucocorticoid (ISO)

response to lipopolysaccharide (ISO)

response to mechanical stimulus (ISO)

response to nicotine (ISO)

response to organic cyclic compound (ISO)

response to organic substance (ISO)

response to ozone (ISO)

response to peptide hormone (ISO)

response to radiation (ISO)

sensory perception of pain (ISO)

Cellular Component

extracellular space (ISO)

neuron projection terminus (ISO)

Molecular Function

cysteine-type endopeptidase activator activity involved in apoptotic process (ISO)

death receptor agonist activity (ISO)

metalloendopeptidase inhibitor activity (ISO)

nerve growth factor receptor binding (ISO)

protein binding (ISO)

transmembrane receptor protein tyrosine kinase activator activity (ISO)

References

References - curated


1.	Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations
2.	OMIM Disease Annotation Pipeline

Genomics

Comparative Map Data

Ngf
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955435	18,581,808 - 18,601,059 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955435	18,581,889 - 18,633,330 (-)	NCBI	ChiLan1.0	ChiLan1.0

NGF
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	1	115,285,917 - 115,338,249 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p13 Ensembl	1	115,285,917 - 115,338,256 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38.p13 Ensembl	1	115,285,918 - 115,338,236 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	1	115,285,915 - 115,338,253 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	1	115,828,537 - 115,880,857 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	115,630,060 - 115,682,380 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	1	115,540,580 - 115,592,899	NCBI
Celera	1	114,057,456 - 114,109,776 (-)	NCBI
Cytogenetic Map	1	p13.2	NCBI
HuRef	1	113,686,915 - 113,739,240 (-)	NCBI		HuRef
CHM1_1	1	115,943,440 - 115,995,752 (-)	NCBI		CHM1_1

Ngf
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	102,377,235 - 102,428,329 (+)	NCBI	GRCm39		mm39
GRCm38	3	102,469,919 - 102,521,013 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	102,469,919 - 102,521,013 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	102,273,851 - 102,324,936 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	3	102,598,989 - 102,650,066 (+)	NCBI			mm8
Celera	3	104,674,123 - 104,724,621 (+)	NCBI		Celera
Cytogenetic Map	3	F2.2	NCBI
cM Map	3	45.25	NCBI

Ngf
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	2	204,886,158 - 204,939,523 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	204,886,202 - 204,940,453 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	224,316,210 - 224,369,663 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	197,621,726 - 197,632,960 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	2	182,322,945 - 182,375,918 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI
RH 3.4 Map	2	1294.4	RGD

NGF
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	122,272,750 - 122,325,909 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	1	87,223,597 - 87,276,759 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

NGF
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	17	52,900,647 - 52,901,607 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	17	52,900,647 - 52,901,607 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Ngf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936627	635,784 - 641,290 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NGF
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	105,256,417 - 105,307,842 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	105,256,691 - 105,307,843 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	115,436,784 - 115,446,393 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NGF
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1 Ensembl	20	18,413,108 - 18,413,833 (+)	Ensembl
ChlSab1.1	20	18,361,795 - 18,413,987 (+)	NCBI

Ngf
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624772	11,009,765 - 11,070,050 (-)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005389020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005389028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013516567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01033408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01170313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCLAT00000006948 ⟹ ENSCLAP00000006836

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955435	18,581,808 - 18,601,059 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000006949 ⟹ ENSCLAP00000006837

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955435	18,582,048 - 18,594,852 (-)	Ensembl

RefSeq Acc Id:

ENSCLAT00000006950 ⟹ ENSCLAP00000006838

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955435	18,582,048 - 18,594,556 (-)	Ensembl

RefSeq Acc Id:

XM_005389020 ⟹ XP_005389077

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,601,886 (-)	NCBI

Sequence:

show sequence

CATCCCCCGCCCAGACTATAGGCCTGAGGGAACTTCTCCAGAGATCTCTATCCTTTCTTCCTAC
AAACCCAAACTCAAACTTTCAGTTTTGGGATATGCATTGTAATGACCCAGAAGGAAAGAACTTC
TACTCAGTGTGAGCAAGTGGCAAGAAGGAGCAGCTGGCCAGGCCTCCTCCTGGAACAACAGGCC
ACACACTCTTCTCACTGGGATGGAAGTGCCAGACGACAGCCAGACTCTGGGCCTGGCCTTAACT
TCTCGGAGAACTTCATTCTTCTAAGTGGGAGCCAATCACTGCTATGAAAGCAGAAATGCTGGAG
ACTGAGGAGAGGCGTCAGAGAGAGCCTTCCTTCTCTGCAGAAGCCTAAGCATCAAGCCTACTTG
CATTTAGATGTGAAGAAATGGAAACACTCAAAACAGCCTGCAAAAATGTGCGCTTACCGTTAGT
AGATTACATCAGTCAAATAGAAGCACCTGCCTCACTTTGGAGGACTCAGAGATGGTGATGGTGA
TGATGGTGATGGTAGCTGTGGTAATGATCATCATAGTGACGGTGGTACTGATGGTGGAGGTGGC
TAATAGTGATGGGTGATTGGGCTACAGCGATTTTTGCAGTGAAACTGAAGTCCAGCTGCTCAAA
CAGAAATGGCCTCGTCTCACGGACACTTTAACGAAGTTCTGGCCTGTGGTCGTGCAGTGCAGGG
GGCTGGATGGCATGCTGGACCCAAACTCAGTTCAGTGTCTGGGCCCAATAACAGCATTGCTAAG
GGAGCAGCTTTCTATCCTGGCCACACTGAGGTGCACAGCGTAATGTCCATGTTGTTCTACACTC
TGATCACAGTGTTTTTGATCGGCATCCAGGCAGAACCATATTCAGACAGCAATGTCCTATCAGG
AGACACCGTCCCCCAAGCCCACTGGACTAAACTCCAACACTCCCTTGACACAGCCCTCCGAAGA
GCCCGCAGTGCGCCTGCTGCACCGATAGCTGCCCGGGTGGCAGGGCAGACCCGCAACATCACTG
TGGACCCCAGACTGTTTAAGAAACGGCGACTCCATTCACCCCGTGTCCTGTTCAGCACCCAGCC
CCCACCCCTGTCTACAGACACTCAGGATCTGGACTTCGAGGTGGATGGCGCAGCTTCTGCCAAC
AGGACTCACAGGAGCAAGCGGTCATCCACCCACCCGGTCTTCCACATGGGGGAGTTCTCAGTGT
GCGACAGTGTCAGCGTGTGGGTTGGGGATAAGACCACAGCCACGGACATTAAGGGCAAGGAGGT
GACAGTTTTGGCAGAGGTAAACATTAACAACAATGTATTCAAACAGTACTTTTTTGAGACCAAG
TGCCGGGACCCCAGTCCCGTGGACAGCGGGTGCCGGGGCATTGACTCCAAGCACTGGAACTCAT
ATTGTACCACGACCCACACCTTTGTCAAGGCACTGACCACAGACGACAAGCAGGCTGCCTGGCG
CTTCATCCGGATAGACACTGCCTGTGTGTGCGTGCTCAGCAGGAAGGCTGCGAGAAGAGGCTGA
TCCTCCCGAAGGCCCCATTTCCCCCCTCCCGCTCCACACTCCTGGGCCCCTCCCTACCTCAACC
TGTAAATTATTTTAAATTATAAGGACTGCATGGTAATTTATAGTTTATACAGTTTTAAAAAATC
ATTATTTATTAAATTTTTGAAGCATCCTGTG

hide sequence

RefSeq Acc Id:

XM_005389022 ⟹ XP_005389079

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,633,290 (-)	NCBI

Sequence:

show sequence

AGCGCCGGGAGCGGAGGGGAGCGCATCGGGTGATTGGGCTACAGCGATTTTTGCAGTGAAACTG
AAGTCCAGCTGCTCAAACAGAAATGGCCTCGTCTCACGGACACTTTAACGAAGTTCTGGCCTGT
GGTCGTGCAGTGCAGGGGGCTGGATGGCATGCTGGACCCAAACTCAGTTCAGTGTCTGGGCCCA
ATAACAGCATTGCTAAGGGAGCAGCTTTCTATCCTGGCCACACTGAGGTGCACAGCGTAATGTC
CATGTTGTTCTACACTCTGATCACAGTGTTTTTGATCGGCATCCAGGCAGAACCATATTCAGAC
AGCAATGTCCTATCAGGAGACACCGTCCCCCAAGCCCACTGGACTAAACTCCAACACTCCCTTG
ACACAGCCCTCCGAAGAGCCCGCAGTGCGCCTGCTGCACCGATAGCTGCCCGGGTGGCAGGGCA
GACCCGCAACATCACTGTGGACCCCAGACTGTTTAAGAAACGGCGACTCCATTCACCCCGTGTC
CTGTTCAGCACCCAGCCCCCACCCCTGTCTACAGACACTCAGGATCTGGACTTCGAGGTGGATG
GCGCAGCTTCTGCCAACAGGACTCACAGGAGCAAGCGGTCATCCACCCACCCGGTCTTCCACAT
GGGGGAGTTCTCAGTGTGCGACAGTGTCAGCGTGTGGGTTGGGGATAAGACCACAGCCACGGAC
ATTAAGGGCAAGGAGGTGACAGTTTTGGCAGAGGTAAACATTAACAACAATGTATTCAAACAGT
ACTTTTTTGAGACCAAGTGCCGGGACCCCAGTCCCGTGGACAGCGGGTGCCGGGGCATTGACTC
CAAGCACTGGAACTCATATTGTACCACGACCCACACCTTTGTCAAGGCACTGACCACAGACGAC
AAGCAGGCTGCCTGGCGCTTCATCCGGATAGACACTGCCTGTGTGTGCGTGCTCAGCAGGAAGG
CTGCGAGAAGAGGCTGATCCTCCCGAAGGCCCCATTTCCCCCCTCCCGCTCCACACTCCTGGGC
CCCTCCCTACCTCAACCTGTAAATTATTTTAAATTATAAGGACTGCATGGTAATTTATAGTTTA
TACAGTTTTAAAAAATCATTATTTATTAAATTTTTGAAGCATCCTGTG

hide sequence

RefSeq Acc Id:

XM_005389026 ⟹ XP_005389083

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,632,465 (-)	NCBI

Sequence:

show sequence

TAGGCAGCGAGGCAGTAGCGGGCGGAGAGGACTCAGGAGTCAGGGAGCCGCAACTCAGTGGACA
TCATAAAGAGTTCTGGCCTGTGGTCGTGCAGTGCAGGGGGCTGGATGGCATGCTGGACCCAAAC
TCAGTTCAGTGTCTGGGCCCAATAACAGCATTGCTAAGGGAGCAGCTTTCTATCCTGGCCACAC
TGAGGTGCACAGCGTAATGTCCATGTTGTTCTACACTCTGATCACAGTGTTTTTGATCGGCATC
CAGGCAGAACCATATTCAGACAGCAATGTCCTATCAGGAGACACCGTCCCCCAAGCCCACTGGA
CTAAACTCCAACACTCCCTTGACACAGCCCTCCGAAGAGCCCGCAGTGCGCCTGCTGCACCGAT
AGCTGCCCGGGTGGCAGGGCAGACCCGCAACATCACTGTGGACCCCAGACTGTTTAAGAAACGG
CGACTCCATTCACCCCGTGTCCTGTTCAGCACCCAGCCCCCACCCCTGTCTACAGACACTCAGG
ATCTGGACTTCGAGGTGGATGGCGCAGCTTCTGCCAACAGGACTCACAGGAGCAAGCGGTCATC
CACCCACCCGGTCTTCCACATGGGGGAGTTCTCAGTGTGCGACAGTGTCAGCGTGTGGGTTGGG
GATAAGACCACAGCCACGGACATTAAGGGCAAGGAGGTGACAGTTTTGGCAGAGGTAAACATTA
ACAACAATGTATTCAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCAGTCCCGTGGACAG
CGGGTGCCGGGGCATTGACTCCAAGCACTGGAACTCATATTGTACCACGACCCACACCTTTGTC
AAGGCACTGACCACAGACGACAAGCAGGCTGCCTGGCGCTTCATCCGGATAGACACTGCCTGTG
TGTGCGTGCTCAGCAGGAAGGCTGCGAGAAGAGGCTGATCCTCCCGAAGGCCCCATTTCCCCCC
TCCCGCTCCACACTCCTGGGCCCCTCCCTACCTCAACCTGTAAATTATTTTAAATTATAAGGAC
TGCATGGTAATTTATAGTTTATACAGTTTTAAAAAATCATTATTTATTAAATTTTTGAAGCATC
CTGTG

hide sequence

RefSeq Acc Id:

XM_005389027 ⟹ XP_005389084

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,632,712 (-)	NCBI

Sequence:

show sequence

CAAGGGTCCTGGGACTTCTCCGCTTATCACGAGAGGACTGGGAGTCCCAGGGGTTGACACGGGA
AGCCCGACCGCCAAGTGCAGGGGTCTGGCGTACCGGAGCCCCCTCGGAGCCTGCTGGACAGCCG
CAAGTGGAAGTCGCAAGGCTCAGACCTGTTATGTGGGTCACACGCTTTACGTCCAGCTGTCCGC
TGCCAGGTGTTGGAGAAGACGAGTTCTGGCCTGTGGTCGTGCAGTGCAGGGGGCTGGATGGCAT
GCTGGACCCAAACTCAGTTCAGTGTCTGGGCCCAATAACAGCATTGCTAAGGGAGCAGCTTTCT
ATCCTGGCCACACTGAGGTGCACAGCGTAATGTCCATGTTGTTCTACACTCTGATCACAGTGTT
TTTGATCGGCATCCAGGCAGAACCATATTCAGACAGCAATGTCCTATCAGGAGACACCGTCCCC
CAAGCCCACTGGACTAAACTCCAACACTCCCTTGACACAGCCCTCCGAAGAGCCCGCAGTGCGC
CTGCTGCACCGATAGCTGCCCGGGTGGCAGGGCAGACCCGCAACATCACTGTGGACCCCAGACT
GTTTAAGAAACGGCGACTCCATTCACCCCGTGTCCTGTTCAGCACCCAGCCCCCACCCCTGTCT
ACAGACACTCAGGATCTGGACTTCGAGGTGGATGGCGCAGCTTCTGCCAACAGGACTCACAGGA
GCAAGCGGTCATCCACCCACCCGGTCTTCCACATGGGGGAGTTCTCAGTGTGCGACAGTGTCAG
CGTGTGGGTTGGGGATAAGACCACAGCCACGGACATTAAGGGCAAGGAGGTGACAGTTTTGGCA
GAGGTAAACATTAACAACAATGTATTCAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCA
GTCCCGTGGACAGCGGGTGCCGGGGCATTGACTCCAAGCACTGGAACTCATATTGTACCACGAC
CCACACCTTTGTCAAGGCACTGACCACAGACGACAAGCAGGCTGCCTGGCGCTTCATCCGGATA
GACACTGCCTGTGTGTGCGTGCTCAGCAGGAAGGCTGCGAGAAGAGGCTGATCCTCCCGAAGGC
CCCATTTCCCCCCTCCCGCTCCACACTCCTGGGCCCCTCCCTACCTCAACCTGTAAATTATTTT
AAATTATAAGGACTGCATGGTAATTTATAGTTTATACAGTTTTAAAAAATCATTATTTATTAAA
TTTTTGAAGCATCCTGTG

hide sequence

RefSeq Acc Id:

XM_005389028 ⟹ XP_005389085

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,633,330 (-)	NCBI

Sequence:

show sequence

GAAGCCTGTTTCGGCGGCTCTGGGCTCGGGCACAGCAGAGAGCGCCGGGAGCGGAGGGGAGCGC
ATCGAGTTCTGGCCTGTGGTCGTGCAGTGCAGGGGGCTGGATGGCATGCTGGACCCAAACTCAG
TTCAGTGTCTGGGCCCAATAACAGCATTGCTAAGGGAGCAGCTTTCTATCCTGGCCACACTGAG
GTGCACAGCGTAATGTCCATGTTGTTCTACACTCTGATCACAGTGTTTTTGATCGGCATCCAGG
CAGAACCATATTCAGACAGCAATGTCCTATCAGGAGACACCGTCCCCCAAGCCCACTGGACTAA
ACTCCAACACTCCCTTGACACAGCCCTCCGAAGAGCCCGCAGTGCGCCTGCTGCACCGATAGCT
GCCCGGGTGGCAGGGCAGACCCGCAACATCACTGTGGACCCCAGACTGTTTAAGAAACGGCGAC
TCCATTCACCCCGTGTCCTGTTCAGCACCCAGCCCCCACCCCTGTCTACAGACACTCAGGATCT
GGACTTCGAGGTGGATGGCGCAGCTTCTGCCAACAGGACTCACAGGAGCAAGCGGTCATCCACC
CACCCGGTCTTCCACATGGGGGAGTTCTCAGTGTGCGACAGTGTCAGCGTGTGGGTTGGGGATA
AGACCACAGCCACGGACATTAAGGGCAAGGAGGTGACAGTTTTGGCAGAGGTAAACATTAACAA
CAATGTATTCAAACAGTACTTTTTTGAGACCAAGTGCCGGGACCCCAGTCCCGTGGACAGCGGG
TGCCGGGGCATTGACTCCAAGCACTGGAACTCATATTGTACCACGACCCACACCTTTGTCAAGG
CACTGACCACAGACGACAAGCAGGCTGCCTGGCGCTTCATCCGGATAGACACTGCCTGTGTGTG
CGTGCTCAGCAGGAAGGCTGCGAGAAGAGGCTGATCCTCCCGAAGGCCCCATTTCCCCCCTCCC
GCTCCACACTCCTGGGCCCCTCCCTACCTCAACCTGTAAATTATTTTAAATTATAAGGACTGCA
TGGTAATTTATAGTTTATACAGTTTTAAAAAATCATTATTTATTAAATTTTTGAAGCATCCTGT
G

hide sequence

RefSeq Acc Id:

XM_013516567 ⟹ XP_013372021

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955435	18,581,889 - 18,601,886 (-)	NCBI

Sequence:

show sequence

CATCCCCCGCCCAGACTATAGGCCTGAGGGAACTTCTCCAGAGATCTCTATCCTTTCTTCCTAC
AAACCCAAACTCAAACTTTCAGTTTTGGGATATGCATTGTAATGACCCAGAAGGAAAGAACTTC
TACTCAGTGTGAGCAAGTGGCAAGAAGGAGCAGCTGGCCAGGCCTCCTCCTGGAACAACAGGCC
ACACACTCTTCTCACTGGGATGGAAGTGCCAGACGACAGCCAGACTCTGGGCCTGGCCTTAACT
TCTCGGAGAACTTCATTCTTCTAAGTGGGAGCCAATCACTGCTATGAAAGCAGAAATGCTGGAG
ACTGAGGAGAGGCGTCAGAGAGAGCCTTCCTTCTCTGCAGAAGCCTAAGCATCAAGCCTACTTG
CATTTAGATGTGAAGAAATGGAAACACTCAAAACAGCCTGCAAAAATGTGCGCTTACCGTTAGT
AGATTACATCAGTCAAATAGAAGCACCTGCCTCACTTTGGAGGACTCAGAGTTCTGGCCTGTGG
TCGTGCAGTGCAGGGGGCTGGATGGCATGCTGGACCCAAACTCAGTTCAGTGTCTGGGCCCAAT
AACAGCATTGCTAAGGGAGCAGCTTTCTATCCTGGCCACACTGAGGTGCACAGCGTAATGTCCA
TGTTGTTCTACACTCTGATCACAGTGTTTTTGATCGGCATCCAGGCAGAACCATATTCAGACAG
CAATGTCCTATCAGGAGACACCGTCCCCCAAGCCCACTGGACTAAACTCCAACACTCCCTTGAC
ACAGCCCTCCGAAGAGCCCGCAGTGCGCCTGCTGCACCGATAGCTGCCCGGGTGGCAGGGCAGA
CCCGCAACATCACTGTGGACCCCAGACTGTTTAAGAAACGGCGACTCCATTCACCCCGTGTCCT
GTTCAGCACCCAGCCCCCACCCCTGTCTACAGACACTCAGGATCTGGACTTCGAGGTGGATGGC
GCAGCTTCTGCCAACAGGACTCACAGGAGCAAGCGGTCATCCACCCACCCGGTCTTCCACATGG
GGGAGTTCTCAGTGTGCGACAGTGTCAGCGTGTGGGTTGGGGATAAGACCACAGCCACGGACAT
TAAGGGCAAGGAGGTGACAGTTTTGGCAGAGGTAAACATTAACAACAATGTATTCAAACAGTAC
TTTTTTGAGACCAAGTGCCGGGACCCCAGTCCCGTGGACAGCGGGTGCCGGGGCATTGACTCCA
AGCACTGGAACTCATATTGTACCACGACCCACACCTTTGTCAAGGCACTGACCACAGACGACAA
GCAGGCTGCCTGGCGCTTCATCCGGATAGACACTGCCTGTGTGTGCGTGCTCAGCAGGAAGGCT
GCGAGAAGAGGCTGATCCTCCCGAAGGCCCCATTTCCCCCCTCCCGCTCCACACTCCTGGGCCC
CTCCCTACCTCAACCTGTAAATTATTTTAAATTATAAGGACTGCATGGTAATTTATAGTTTATA
CAGTTTTAAAAAATCATTATTTATTAAATTTTTGAAGCATCCTGTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005389077	(Get FASTA)	NCBI Sequence Viewer
	XP_005389079	(Get FASTA)	NCBI Sequence Viewer
	XP_005389083	(Get FASTA)	NCBI Sequence Viewer
	XP_005389084	(Get FASTA)	NCBI Sequence Viewer
	XP_005389085	(Get FASTA)	NCBI Sequence Viewer
	XP_013372021	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_005389085 ⟸ XM_005389028

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSMLFYTLITVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVA
GQTRNITVDPRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVF
HMGEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGI
DSKHWNSYCTTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

XP_005389079 ⟸ XM_005389022

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASSHGHFNEVLACGRAVQGAGWHAGPKLSSVSGPNNSIAKGAAFYPGHTEVHSVMSMLFYTLI
TVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVAGQTRNITVD
PRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVFHMGEFSVCD
SVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGIDSKHWNSYC
TTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

XP_005389084 ⟸ XM_005389027

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSMLFYTLITVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVA
GQTRNITVDPRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVF
HMGEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGI
DSKHWNSYCTTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

XP_005389083 ⟸ XM_005389026

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSMLFYTLITVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVA
GQTRNITVDPRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVF
HMGEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGI
DSKHWNSYCTTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

XP_005389077 ⟸ XM_005389020

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASSHGHFNEVLACGRAVQGAGWHAGPKLSSVSGPNNSIAKGAAFYPGHTEVHSVMSMLFYTLI
TVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVAGQTRNITVD
PRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVFHMGEFSVCD
SVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGIDSKHWNSYC
TTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

XP_013372021 ⟸ XM_013516567

- Peptide Label:

isoform X2

- Sequence:

show sequence

MSMLFYTLITVFLIGIQAEPYSDSNVLSGDTVPQAHWTKLQHSLDTALRRARSAPAAPIAARVA
GQTRNITVDPRLFKKRRLHSPRVLFSTQPPPLSTDTQDLDFEVDGAASANRTHRSKRSSTHPVF
HMGEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNNVFKQYFFETKCRDPSPVDSGCRGI
DSKHWNSYCTTTHTFVKALTTDDKQAAWRFIRIDTACVCVLSRKAARRG

hide sequence

RefSeq Acc Id:

ENSCLAP00000006838 ⟸ ENSCLAT00000006950

RefSeq Acc Id:

ENSCLAP00000006837 ⟸ ENSCLAT00000006949

RefSeq Acc Id:

ENSCLAP00000006836 ⟸ ENSCLAT00000006948

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004815	Ensembl, ENTREZGENE
Ensembl Protein	ENSCLAP00000006836	ENTREZGENE
Ensembl Transcript	ENSCLAT00000006948	ENTREZGENE
NCBI Gene	Ngf	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Ngf	nerve growth factor		nerve growth factor (beta polypeptide)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM