Slc50a1 (solute carrier family 50 member 1)

Gene: Slc50a1 (solute carrier family 50 member 1) Chinchilla lanigera

Analyze

Symbol:

Slc50a1

Name:

solute carrier family 50 member 1

RGD ID:

8927793

Description:

ENCODES a protein that exhibits glucoside transmembrane transporter activity (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN endomembrane system (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

solute carrier family 50 (sugar efflux transporter), member 1; sugar transporter SWEET1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	1,617,538 - 1,625,022 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	1,617,725 - 1,620,804 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

endomembrane system (ISO)

Golgi apparatus (ISO)

plasma membrane (ISO)

Molecular Function

glucoside transmembrane transporter activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slc50a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	1,617,538 - 1,625,022 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	1,617,725 - 1,620,804 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC50A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	155,135,375 - 155,138,853 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	155,135,344 - 155,138,857 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	155,107,851 - 155,111,329 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	153,374,950 - 153,377,951 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	128,179,725 - 128,182,926 (+)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI
HuRef	1	126,470,764 - 126,473,811 (+)	NCBI		HuRef
CHM1_1	1	156,504,026 - 156,507,073 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	154,274,731 - 154,278,210 (+)	NCBI		T2T-CHM13v2.0

Slc50a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	89,175,553 - 89,177,878 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	89,175,553 - 89,177,877 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	89,268,246 - 89,270,591 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	89,268,246 - 89,270,570 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	89,072,168 - 89,074,492 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	89,354,173 - 89,356,487 (-)	NCBI		MGSCv36	mm8
Celera	3	89,303,079 - 89,305,403 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.04	NCBI

Slc50a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	176,975,744 - 176,978,124 (-)	NCBI		GRCr8
mRatBN7.2	2	174,677,985 - 174,680,366 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	174,677,708 - 174,680,366 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	181,823,606 - 181,825,986 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	179,845,984 - 179,848,364 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	174,445,946 - 174,448,326 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	188,585,118 - 188,587,498 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	188,585,118 - 188,587,498 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	207,998,463 - 208,000,843 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	181,440,905 - 181,443,285 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	181,391,251 - 181,393,782 (-)	NCBI
Celera	2	168,620,201 - 168,622,581 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

SLC50A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	94,702,484 - 94,705,966 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	94,433,935 - 94,437,416 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	130,483,056 - 130,486,534 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	134,092,185 - 134,095,233 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	134,092,045 - 134,095,233 (+)	Ensembl	panpan1.1		panPan2

SLC50A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	42,370,031 - 42,372,390 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	42,370,299 - 42,372,322 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	41,860,385 - 41,862,745 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	42,239,019 - 42,241,379 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	42,239,287 - 42,241,310 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	42,018,833 - 42,021,193 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	42,072,687 - 42,075,047 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	42,356,319 - 42,358,679 (-)	NCBI		UU_Cfam_GSD_1.0

Slc50a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	25,630,774 - 25,633,755 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	4,661,884 - 4,664,159 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	4,661,890 - 4,664,137 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC50A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	94,663,059 - 94,665,467 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	94,663,057 - 94,665,486 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	103,445,704 - 103,448,133 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC50A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	8,691,479 - 8,694,993 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	8,691,053 - 8,695,018 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	8,023,380 - 8,026,865 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc50a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	2,379,489 - 2,381,918 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	2,379,489 - 2,381,921 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005411573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005411575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013508366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013508367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01071863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01141801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000005862 ⟹ ENSCLAP00000005761

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955545	1,617,538 - 1,625,022 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000005863 ⟹ ENSCLAP00000005762

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955545	1,618,188 - 1,620,523 (+)	Ensembl

RefSeq Acc Id:

XM_005411573 ⟹ XP_005411630

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	1,618,092 - 1,620,804 (+)	NCBI

Sequence:

show sequence

GGCGCGGGGGCGGGGCCGGGCGCACGCCTGGCTGGGCTCTAGCGTCGCTGGCTCCTGGGCTGAA
CTGTCCCCGGCCCGGGATCCGATTGGGGCAGGATGGAGACGGGCAGCATGGCCGACTCGCTCCT
TTCCGGAGCTTGCGTGGTCTTCACCCTTGGCATGTTCTCCACCGGCCTCTCGGACCTCAGGCAC
ATGCAGAGGACCCGGAGCGTGGACAGCGTCCAGTTCCTGCCCTTTCTCACCACGGATGTCAACA
ACCTGGGCTGGCTGAGTTATGGGGTCCTGAAGGGAGACGGGACCCTCATCATCGTCAACGCTGT
AGGTGCTGTGCTTCAGACCCTGTATATCCTGGCCTATCTTCACTACTGCCCGCAGAAGCGCATT
GTGCTCCTACAGACTGCAACCCTGCTGGGGGTCCTTCTCATGGGTTATGGCTACTTTTGGCTCC
TGATGCCCGATGATGAGGCCCGGCTTCAGCAGCTCGGCCTCTTCTGCAGTGTCTTCACCATCAG
CATGTATCTCTCACCACTGGCTGACTTGGCCAAGGTCATTCAAACTAAATCAACCCATCGTCTC
TCCTTCTCACTCACCATTGCCACCCTCCTTACCTCTGCCTCCTGGTCCCTCTATGGGTTTCGAC
TCAGAGATCTCTACATCATGGTCCCCAACCTTCCAGGAATCCTTACCAGCTTTATCCGCCTCTG
GCTTTTCTGGAAGTACCCCCCAGAGCAAGACAAGAATTATCGGCTTCTGCAAACCTGAGGCAGC
TCATCTAAACACTAGGCACCCTAATGCCAACTTGATACCAAAGAGTTCCTTGTTTCAGATGGTC
CTGGTGACCTGTCCTATAGGTGCAGTGGGTTGTGGGAAAGAGACAATTTTGAGATTAGAGGGTT
CAAAAAATGAGCTTCACTCAGAAGACTGGGTGGGACCTATGAGATGAAATCACTTATTTGCCTG
AAAAATTATCTTTTTTAATTTTGGAAATTGGGGTGATATCTTTACACTGTGCCTTAAAATAAAC
TGTTCCCCACCCCTGCCAA

hide sequence

RefSeq Acc Id:

XM_005411574 ⟹ XP_005411631

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	1,618,334 - 1,620,804 (+)	NCBI

Sequence:

show sequence

AGCCGTGGCCATGCCCCCGGGCAGCGTCCGGAATCAGCAGTCAAAAGTGGAATCTGGTCGAAGG
GATTGGGATGCAAGGCTCGGACCTCAGGCACATGCAGAGGACCCGGAGCGTGGACAGCGTCCAG
TTCCTGCCCTTTCTCACCACGGATGTCAACAACCTGGGCTGGCTGAGTTATGGGGTCCTGAAGG
GAGACGGGACCCTCATCATCGTCAACGCTGTAGGTGCTGTGCTTCAGACCCTGTATATCCTGGC
CTATCTTCACTACTGCCCGCAGAAGCGCATTGTGCTCCTACAGACTGCAACCCTGCTGGGGGTC
CTTCTCATGGGTTATGGCTACTTTTGGCTCCTGATGCCCGATGATGAGGCCCGGCTTCAGCAGC
TCGGCCTCTTCTGCAGTGTCTTCACCATCAGCATGTATCTCTCACCACTGGCTGACTTGGCCAA
GGTCATTCAAACTAAATCAACCCATCGTCTCTCCTTCTCACTCACCATTGCCACCCTCCTTACC
TCTGCCTCCTGGTCCCTCTATGGGTTTCGACTCAGAGATCTCTACATCATGGTCCCCAACCTTC
CAGGAATCCTTACCAGCTTTATCCGCCTCTGGCTTTTCTGGAAGTACCCCCCAGAGCAAGACAA
GAATTATCGGCTTCTGCAAACCTGAGGCAGCTCATCTAAACACTAGGCACCCTAATGCCAACTT
GATACCAAAGAGTTCCTTGTTTCAGATGGTCCTGGTGACCTGTCCTATAGGTGCAGTGGGTTGT
GGGAAAGAGACAATTTTGAGATTAGAGGGTTCAAAAAATGAGCTTCACTCAGAAGACTGGGTGG
GACCTATGAGATGAAATCACTTATTTGCCTGAAAAATTATCTTTTTTAATTTTGGAAATTGGGG
TGATATCTTTACACTGTGCCTTAAAATAAACTGTTCCCCACCCCTGCCAA

hide sequence

RefSeq Acc Id:

XM_005411575 ⟹ XP_005411632

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	1,617,725 - 1,620,804 (+)	NCBI

Sequence:

show sequence

GAGGCTGGGAAGAGGCTTCAGTGAACTCGGGAAATCTTCCCAAACCCTCGACCACTGAGGTCCT
GATTTGGAGCTCTGGACAGGAGGCCTAAAGTCCCGGAAGTCTAGCTTTTGAGTCCCACCACGTG
GGCTTCAGCTCGGACCTCAGGCACATGCAGAGGACCCGGAGCGTGGACAGCGTCCAGTTCCTGC
CCTTTCTCACCACGGATGTCAACAACCTGGGCTGGCTGAGTTATGGGGTCCTGAAGGGAGACGG
GACCCTCATCATCGTCAACGCTGTAGGTGCTGTGCTTCAGACCCTGTATATCCTGGCCTATCTT
CACTACTGCCCGCAGAAGCGCATTGTGCTCCTACAGACTGCAACCCTGCTGGGGGTCCTTCTCA
TGGGTTATGGCTACTTTTGGCTCCTGATGCCCGATGATGAGGCCCGGCTTCAGCAGCTCGGCCT
CTTCTGCAGTGTCTTCACCATCAGCATGTATCTCTCACCACTGGCTGACTTGGCCAAGGTCATT
CAAACTAAATCAACCCATCGTCTCTCCTTCTCACTCACCATTGCCACCCTCCTTACCTCTGCCT
CCTGGTCCCTCTATGGGTTTCGACTCAGAGATCTCTACATCATGGTCCCCAACCTTCCAGGAAT
CCTTACCAGCTTTATCCGCCTCTGGCTTTTCTGGAAGTACCCCCCAGAGCAAGACAAGAATTAT
CGGCTTCTGCAAACCTGAGGCAGCTCATCTAAACACTAGGCACCCTAATGCCAACTTGATACCA
AAGAGTTCCTTGTTTCAGATGGTCCTGGTGACCTGTCCTATAGGTGCAGTGGGTTGTGGGAAAG
AGACAATTTTGAGATTAGAGGGTTCAAAAAATGAGCTTCACTCAGAAGACTGGGTGGGACCTAT
GAGATGAAATCACTTATTTGCCTGAAAAATTATCTTTTTTAATTTTGGAAATTGGGGTGATATC
TTTACACTGTGCCTTAAAATAAACTGTTCCCCACCCCTGCCAA

hide sequence

RefSeq Acc Id:

XM_013508366 ⟹ XP_013363820

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	1,618,307 - 1,620,804 (+)	NCBI

Sequence:

show sequence

AGTCAGGAAAGGGGGGCGAATGGACAGAGCCGTGGCCATGCCCCCGGGCAGCGTCCGGAATCAG
CAGTCAAAAGTGGAATCTGCTCGGACCTCAGGCACATGCAGAGGACCCGGAGCGTGGACAGCGT
CCAGTTCCTGCCCTTTCTCACCACGGATGTCAACAACCTGGGCTGGCTGAGTTATGGGGTCCTG
AAGGGAGACGGGACCCTCATCATCGTCAACGCTGTAGGTGCTGTGCTTCAGACCCTGTATATCC
TGGCCTATCTTCACTACTGCCCGCAGAAGCGCATTGTGCTCCTACAGACTGCAACCCTGCTGGG
GGTCCTTCTCATGGGTTATGGCTACTTTTGGCTCCTGATGCCCGATGATGAGGCCCGGCTTCAG
CAGCTCGGCCTCTTCTGCAGTGTCTTCACCATCAGCATGTATCTCTCACCACTGGCTGACTTGG
CCAAGGTCATTCAAACTAAATCAACCCATCGTCTCTCCTTCTCACTCACCATTGCCACCCTCCT
TACCTCTGCCTCCTGGTCCCTCTATGGGTTTCGACTCAGAGATCTCTACATCATGGTCCCCAAC
CTTCCAGGAATCCTTACCAGCTTTATCCGCCTCTGGCTTTTCTGGAAGTACCCCCCAGAGCAAG
ACAAGAATTATCGGCTTCTGCAAACCTGAGGCAGCTCATCTAAACACTAGGCACCCTAATGCCA
ACTTGATACCAAAGAGTTCCTTGTTTCAGATGGTCCTGGTGACCTGTCCTATAGGTGCAGTGGG
TTGTGGGAAAGAGACAATTTTGAGATTAGAGGGTTCAAAAAATGAGCTTCACTCAGAAGACTGG
GTGGGACCTATGAGATGAAATCACTTATTTGCCTGAAAAATTATCTTTTTTAATTTTGGAAATT
GGGGTGATATCTTTACACTGTGCCTTAAAATAAACTGTTCCCCACCCCTGCCAA

hide sequence

RefSeq Acc Id:

XM_013508367 ⟹ XP_013363821

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955545	1,618,274 - 1,620,804 (+)	NCBI

Sequence:

show sequence

GCGCAGCCCGAGTGGGCTGGGGCAGGACCAGGAAGTCAGGAAAGGGGGGCGAATGGACAGAGCC
GTGGCCATGCCCCCGGGCAGCGTCCGGAATCAGCAGTCAAAAGTGGAATCTGGTCGAAGGGATT
GGGATGCAAGGCTCGGACCTCAGGCACATGCAGAGGACCCGGAGCGTGGACAGCGTCCAGTTCC
TGCCCTTTCTCACCACGGATGTCAACGCATTGTGCTCCTACAGACTGCAACCCTGCTGGGGGTC
CTTCTCATGGGTTATGGCTACTTTTGGCTCCTGATGCCCGATGATGAGGCCCGGCTTCAGCAGC
TCGGCCTCTTCTGCAGTGTCTTCACCATCAGCATGTATCTCTCACCACTGGCTGACTTGGCCAA
GGTCATTCAAACTAAATCAACCCATCGTCTCTCCTTCTCACTCACCATTGCCACCCTCCTTACC
TCTGCCTCCTGGTCCCTCTATGGGTTTCGACTCAGAGATCTCTACATCATGGTCCCCAACCTTC
CAGGAATCCTTACCAGCTTTATCCGCCTCTGGCTTTTCTGGAAGTACCCCCCAGAGCAAGACAA
GAATTATCGGCTTCTGCAAACCTGAGGCAGCTCATCTAAACACTAGGCACCCTAATGCCAACTT
GATACCAAAGAGTTCCTTGTTTCAGATGGTCCTGGTGACCTGTCCTATAGGTGCAGTGGGTTGT
GGGAAAGAGACAATTTTGAGATTAGAGGGTTCAAAAAATGAGCTTCACTCAGAAGACTGGGTGG
GACCTATGAGATGAAATCACTTATTTGCCTGAAAAATTATCTTTTTTAATTTTGGAAATTGGGG
TGATATCTTTACACTGTGCCTTAAAATAAACTGTTCCCCACCCCTGCCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005411630	(Get FASTA)	NCBI Sequence Viewer
	XP_005411631	(Get FASTA)	NCBI Sequence Viewer
	XP_005411632	(Get FASTA)	NCBI Sequence Viewer
	XP_013363820	(Get FASTA)	NCBI Sequence Viewer
	XP_013363821	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005761
	ENSCLAP00000005761.1
	ENSCLAP00000005762.1

RefSeq Acc Id:	XP_005411632 ⟸ XM_005411575
- Peptide Label:	isoform X3
- Sequence:	show sequence MQRTRSVDSVQFLPFLTTDVNNLGWLSYGVLKGDGTLIIVNAVGAVLQTLYILAYLHYCPQKRI VLLQTATLLGVLLMGYGYFWLLMPDDEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTHRL SFSLTIATLLTSASWSLYGFRLRDLYIMVPNLPGILTSFIRLWLFWKYPPEQDKNYRLLQT hide sequence

RefSeq Acc Id:	XP_005411630 ⟸ XM_005411573
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V0A9 (UniProtKB/TrEMBL)
- Sequence:	show sequence METGSMADSLLSGACVVFTLGMFSTGLSDLRHMQRTRSVDSVQFLPFLTTDVNNLGWLSYGVLK GDGTLIIVNAVGAVLQTLYILAYLHYCPQKRIVLLQTATLLGVLLMGYGYFWLLMPDDEARLQQ LGLFCSVFTISMYLSPLADLAKVIQTKSTHRLSFSLTIATLLTSASWSLYGFRLRDLYIMVPNL PGILTSFIRLWLFWKYPPEQDKNYRLLQT hide sequence

RefSeq Acc Id:	XP_005411631 ⟸ XM_005411574
- Peptide Label:	isoform X2
- Sequence:	show sequence MQGSDLRHMQRTRSVDSVQFLPFLTTDVNNLGWLSYGVLKGDGTLIIVNAVGAVLQTLYILAYL HYCPQKRIVLLQTATLLGVLLMGYGYFWLLMPDDEARLQQLGLFCSVFTISMYLSPLADLAKVI QTKSTHRLSFSLTIATLLTSASWSLYGFRLRDLYIMVPNLPGILTSFIRLWLFWKYPPEQDKNY RLLQT hide sequence

RefSeq Acc Id:	XP_013363821 ⟸ XM_013508367
- Peptide Label:	isoform X4
- Sequence:	show sequence MDRAVAMPPGSVRNQQSKVESGRRDWDARLGPQAHAEDPERGQRPVPALSHHGCQRIVLLQTAT LLGVLLMGYGYFWLLMPDDEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTHRLSFSLTIA TLLTSASWSLYGFRLRDLYIMVPNLPGILTSFIRLWLFWKYPPEQDKNYRLLQT hide sequence

RefSeq Acc Id:	XP_013363820 ⟸ XM_013508366
- Peptide Label:	isoform X3
- Sequence:	show sequence MQRTRSVDSVQFLPFLTTDVNNLGWLSYGVLKGDGTLIIVNAVGAVLQTLYILAYLHYCPQKRI VLLQTATLLGVLLMGYGYFWLLMPDDEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTHRL SFSLTIATLLTSASWSLYGFRLRDLYIMVPNLPGILTSFIRLWLFWKYPPEQDKNYRLLQT hide sequence

RefSeq Acc Id:

ENSCLAP00000005762 ⟸ ENSCLAT00000005863

RefSeq Acc Id:

ENSCLAP00000005761 ⟸ ENSCLAT00000005862

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000004084	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005862	ENTREZGENE
	ENSCLAT00000005862.1	UniProtKB/TrEMBL
	ENSCLAT00000005863.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1280.290	UniProtKB/TrEMBL
InterPro	SWEET	UniProtKB/TrEMBL
	SWEET_sugar_transpr	UniProtKB/TrEMBL
NCBI Gene	Slc50a1	ENTREZGENE
PANTHER	RAG1-ACTIVATING PROTEIN 1	UniProtKB/TrEMBL
	SUGAR TRANSPORTER SWEET1	UniProtKB/TrEMBL
Pfam	MtN3_slv	UniProtKB/TrEMBL
UniProt	A0A8C2UUM8_CHILA	UniProtKB/TrEMBL
	A0A8C2V0A9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Slc50a1	solute carrier family 50 member 1		solute carrier family 50 (sugar efflux transporter), member 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar