Pla2r1 (phospholipase A2 receptor 1) - Rat Genome Database

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Gene: Pla2r1 (phospholipase A2 receptor 1) Chinchilla lanigera
Analyze
Symbol: Pla2r1
Name: phospholipase A2 receptor 1
RGD ID: 8923705
Description: ENCODES a protein that exhibits phospholipase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of arachidonic acid secretion (ortholog); oxidative stress-induced premature senescence (ortholog); positive regulation of arachidonic acid secretion (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phospholipase A2 receptor 1, 180kDa; secretory phospholipase A2 receptor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544913,542,458 - 13,653,901 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544913,542,458 - 13,653,907 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Pla2r1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544913,542,458 - 13,653,901 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544913,542,458 - 13,653,907 (+)NCBIChiLan1.0ChiLan1.0
PLA2R1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382159,923,933 - 160,062,615 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2159,932,006 - 160,062,615 (-)EnsemblGRCh38hg38GRCh38
GRCh372160,788,517 - 160,919,126 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362160,506,258 - 160,627,367 (-)NCBINCBI36Build 36hg18NCBI36
Build 342160,623,518 - 160,744,628NCBI
Celera2154,409,843 - 154,530,612 (-)NCBICelera
Cytogenetic Map2q24.2NCBI
HuRef2152,680,921 - 152,802,464 (-)NCBIHuRef
CHM1_12160,803,972 - 160,925,802 (-)NCBICHM1_1
T2T-CHM13v2.02160,390,236 - 160,520,476 (-)NCBIT2T-CHM13v2.0
Pla2r1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39260,247,887 - 60,383,669 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl260,247,887 - 60,383,652 (-)EnsemblGRCm39 Ensembl
GRCm38260,417,543 - 60,553,326 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl260,417,543 - 60,553,308 (-)EnsemblGRCm38mm10GRCm38
MGSCv37260,257,096 - 60,391,318 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36260,219,878 - 60,354,100 (-)NCBIMGSCv36mm8
Celera262,114,846 - 62,248,845 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map234.65NCBI
Pla2r1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8365,292,629 - 65,422,462 (-)NCBIGRCr8
mRatBN7.2344,883,943 - 45,013,793 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl344,883,943 - 45,013,660 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx348,247,142 - 48,377,055 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0356,830,710 - 56,960,614 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0354,593,716 - 54,723,423 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0346,488,963 - 46,621,873 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl346,488,186 - 46,621,873 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0351,596,536 - 51,728,234 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4342,121,966 - 42,250,869 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1342,019,194 - 42,149,167 (-)NCBI
Celera342,925,061 - 43,047,841 (-)NCBICelera
Cytogenetic Map3q21NCBI
PLA2R1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21362,624,388 - 62,755,267 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B62,630,501 - 62,769,047 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B47,226,791 - 47,355,831 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B164,605,151 - 164,726,347 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B164,605,440 - 164,726,017 (-)Ensemblpanpan1.1panPan2
PLA2R1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1365,696,733 - 5,793,599 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl365,698,429 - 5,794,204 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha365,835,012 - 5,950,082 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0365,820,158 - 5,935,288 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl365,822,692 - 5,935,691 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1365,837,695 - 5,952,707 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0365,881,284 - 5,995,878 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0365,990,064 - 6,105,088 (-)NCBIUU_Cfam_GSD_1.0
Pla2r1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303122,828,065 - 122,937,741 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646918,679,914 - 18,789,369 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646918,679,840 - 18,789,655 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLA2R1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1566,898,508 - 67,001,192 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11566,899,783 - 67,018,608 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21574,119,062 - 74,325,762 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLA2R1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11045,331,865 - 45,458,389 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1045,341,383 - 45,440,840 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040154,113,965 - 154,240,675 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pla2r1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247325,525,863 - 5,677,811 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247325,525,740 - 5,681,772 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005284   ⟹   ENSCLAP00000005188
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544913,542,458 - 13,653,901 (+)Ensembl
RefSeq Acc Id: XM_005393355   ⟹   XP_005393412
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544913,542,458 - 13,653,907 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005393412 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000005188
  ENSCLAP00000005188.1
Reference Protein Sequences
RefSeq Acc Id: XP_005393412   ⟸   XM_005393355
- UniProtKB: A0A8C2UYL1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000005188   ⟸   ENSCLAT00000005284
Protein Domains
C-type lectin   Fibronectin type-II


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003681 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005284 ENTREZGENE
  ENSCLAT00000005284.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.10.10 UniProtKB/TrEMBL
  2.80.10.50 UniProtKB/TrEMBL
  3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/TrEMBL
  CTDL_fold UniProtKB/TrEMBL
  FN_type2_dom UniProtKB/TrEMBL
  FN_type2_sf UniProtKB/TrEMBL
  Kringle-like UniProtKB/TrEMBL
  Ricin_B-like_lectins UniProtKB/TrEMBL
  Ricin_B_lectin UniProtKB/TrEMBL
NCBI Gene Pla2r1 ENTREZGENE
PANTHER MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED UniProtKB/TrEMBL
  SECRETORY PHOSPHOLIPASE A2 RECEPTOR UniProtKB/TrEMBL
Pfam fn2 UniProtKB/TrEMBL
  Lectin_C UniProtKB/TrEMBL
PRINTS FNTYPEII UniProtKB/TrEMBL
PROSITE C_TYPE_LECTIN_1 UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/TrEMBL
  FN2_1 UniProtKB/TrEMBL
  FN2_2 UniProtKB/TrEMBL
  RICIN_B_LECTIN UniProtKB/TrEMBL
SMART CLECT UniProtKB/TrEMBL
  FN2 UniProtKB/TrEMBL
  RICIN UniProtKB/TrEMBL
Superfamily-SCOP SSF50370 UniProtKB/TrEMBL
  SSF56436 UniProtKB/TrEMBL
  SSF57440 UniProtKB/TrEMBL
UniProt A0A8C2UYL1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Pla2r1  phospholipase A2 receptor 1    phospholipase A2 receptor 1, 180kDa  Symbol and/or name change 5135510 APPROVED