Mfsd12 (major facilitator superfamily domain containing 12) - Rat Genome Database

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Gene: Mfsd12 (major facilitator superfamily domain containing 12) Chinchilla lanigera
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Symbol: Mfsd12
Name: major facilitator superfamily domain containing 12
RGD ID: 8922467
Description: ENCODES a protein that exhibits cysteine transmembrane transporter activity (ortholog); INVOLVED IN cysteine transmembrane transport (ortholog); hair follicle development (ortholog); negative regulation of melanin biosynthetic process (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); melanosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: major facilitator superfamily domain-containing protein 12
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,506,154 - 5,516,142 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,505,528 - 5,516,330 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
late endosome  (ISO)
lysosome  (ISO)
melanosome  (ISO)

Molecular Function

References


Genomics

Comparative Map Data
Mfsd12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,506,154 - 5,516,142 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,505,528 - 5,516,330 (-)NCBIChiLan1.0ChiLan1.0
MFSD12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl193,538,261 - 3,574,290 (-)EnsemblGRCh38hg38GRCh38
GRCh38193,538,270 - 3,557,592 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37193,544,197 - 3,557,584 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,489,263 - 3,508,571 (-)NCBINCBI36hg18NCBI36
Build 34193,495,197 - 3,508,561NCBI
Celera193,475,073 - 3,494,380 (-)NCBI
Cytogenetic Map19p13.3NCBI
HuRef193,303,815 - 3,323,043 (-)NCBIHuRef
CHM1_1193,537,933 - 3,557,234 (-)NCBICHM1_1
Mfsd12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391081,193,325 - 81,202,059 (+)NCBIGRCm39mm39
GRCm39 Ensembl1081,193,325 - 81,202,059 (+)Ensembl
GRCm381081,357,491 - 81,366,225 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,357,491 - 81,366,225 (+)EnsemblGRCm38mm10GRCm38
MGSCv371080,820,315 - 80,826,780 (+)NCBIGRCm37mm9NCBIm37
MGSCv361080,820,236 - 80,828,967 (+)NCBImm8
Celera1082,378,603 - 82,385,068 (+)NCBICelera
Cytogenetic Map10C1NCBI
Mfsd12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.278,345,171 - 8,354,050 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl78,347,314 - 8,353,988 (-)Ensembl
Rnor_6.0711,214,832 - 11,223,713 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,216,975 - 11,223,649 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0711,383,866 - 11,390,540 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.479,831,853 - 9,838,324 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.179,829,711 - 9,837,769 (-)NCBI
Celera76,536,377 - 6,543,051 (-)NCBICelera
Cytogenetic Map7q11NCBI
MFSD12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1193,519,886 - 3,548,934 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl193,520,399 - 3,532,767 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0192,570,068 - 2,583,505 (-)NCBIMhudiblu_PPA_v0panPan3
MFSD12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12055,855,102 - 55,863,606 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2055,858,687 - 55,862,181 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2055,579,634 - 55,588,060 (+)NCBI
ROS_Cfam_1.02056,514,447 - 56,522,856 (+)NCBI
UMICH_Zoey_3.12055,570,115 - 55,578,534 (+)NCBI
UNSW_CanFamBas_1.02056,053,492 - 56,061,939 (+)NCBI
UU_Cfam_GSD_1.02056,252,252 - 56,260,682 (+)NCBI
Mfsd12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118215,815,659 - 215,823,018 (+)NCBI
SpeTri2.0NW_0049365882,011,838 - 2,019,119 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MFSD12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl275,107,212 - 75,120,708 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1275,098,531 - 75,120,795 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2275,765,114 - 75,775,975 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MFSD12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.163,307,855 - 3,322,966 (-)NCBI
ChlSab1.1 Ensembl63,304,960 - 3,322,896 (-)Ensembl
Vero_WHO_p1.0NW_0236660815,171,004 - 5,184,456 (+)NCBI
Mfsd12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248286,255,889 - 6,268,697 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000011979   ⟹   ENSCLAP00000011840
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554955,506,154 - 5,516,142 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000011980   ⟹   ENSCLAP00000011841
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554955,507,933 - 5,516,142 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000011981   ⟹   ENSCLAP00000011842
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554955,507,947 - 5,516,142 (-)Ensembl
RefSeq Acc Id: XM_005405874   ⟹   XP_005405931
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554955,507,625 - 5,516,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013505236   ⟹   XP_013360690
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554955,505,528 - 5,516,330 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405931 (Get FASTA)   NCBI Sequence Viewer  
  XP_013360690 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005405931   ⟸   XM_005405874
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013360690   ⟸   XM_013505236
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000011840   ⟸   ENSCLAT00000011979
RefSeq Acc Id: ENSCLAP00000011841   ⟸   ENSCLAT00000011980
RefSeq Acc Id: ENSCLAP00000011842   ⟸   ENSCLAT00000011981


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008160 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000011840 ENTREZGENE
  ENSCLAP00000011841 ENTREZGENE
Ensembl Transcript ENSCLAT00000011979 ENTREZGENE
  ENSCLAT00000011980 ENTREZGENE
NCBI Gene Mfsd12 ENTREZGENE