Hyal1 (hyaluronidase 1) - Rat Genome Database

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Gene: Hyal1 (hyaluronidase 1) Chinchilla lanigera
Analyze
Symbol: Hyal1
Name: hyaluronidase 1
RGD ID: 8920769
Description: ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyaluronan synthase activity (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hyaluronidase-1; hyaluronoglucosaminidase 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555322,112,771 - 2,115,952 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555322,113,016 - 2,116,093 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline

Genomics

Comparative Map Data
Hyal1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555322,112,771 - 2,115,952 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555322,113,016 - 2,116,093 (-)NCBIChiLan1.0ChiLan1.0
HYAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38350,299,893 - 50,312,381 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl350,299,890 - 50,312,381 (-)EnsemblGRCh38hg38GRCh38
GRCh37350,337,324 - 50,349,812 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36350,312,324 - 50,324,816 (-)NCBINCBI36Build 36hg18NCBI36
Build 34350,312,324 - 50,316,008NCBI
Celera350,310,151 - 50,322,647 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef350,393,063 - 50,405,514 (-)NCBIHuRef
CHM1_1350,289,626 - 50,302,099 (-)NCBICHM1_1
T2T-CHM13v2.0350,329,249 - 50,342,103 (-)NCBIT2T-CHM13v2.0
Hyal1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,454,149 - 107,458,898 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9107,454,126 - 107,458,909 (+)EnsemblGRCm39 Ensembl
GRCm389107,576,950 - 107,581,699 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,576,927 - 107,581,710 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,479,283 - 107,482,468 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369107,435,053 - 107,438,238 (+)NCBIMGSCv36mm8
Celera9107,185,725 - 107,188,909 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map958.17NCBI
Hyal1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28108,250,654 - 108,254,526 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8108,250,667 - 108,260,210 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8113,877,617 - 113,879,930 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.08112,076,774 - 112,079,087 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.08109,919,556 - 109,921,869 (+)NCBIRnor_WKY
Rnor_6.08116,332,834 - 116,337,522 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,332,796 - 116,335,435 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08115,689,184 - 115,691,497 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48112,824,562 - 112,826,875 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18112,844,016 - 112,846,330 (+)NCBI
Celera8107,557,375 - 107,559,688 (+)NCBICelera
Cytogenetic Map8q32NCBI
HYAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1351,463,239 - 51,473,030 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl351,463,239 - 51,467,286 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0350,228,491 - 50,238,798 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
HYAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12039,035,924 - 39,040,443 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2039,038,514 - 39,040,368 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2038,955,644 - 38,961,480 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02039,390,640 - 39,396,476 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2039,385,565 - 39,396,473 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12038,758,465 - 38,764,301 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02039,162,014 - 39,167,822 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02039,442,045 - 39,447,881 (+)NCBIUU_Cfam_GSD_1.0
Hyal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560265,077,652 - 65,080,619 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365291,838,676 - 1,841,188 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049365291,838,212 - 1,842,399 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HYAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,797,681 - 32,800,793 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11332,798,135 - 32,800,705 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,976,670 - 35,979,238 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap13q21NCBI
HYAL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12211,689,123 - 11,693,144 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2211,688,970 - 11,693,183 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041155,294,855 - 155,298,582 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hyal1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247304,160,557 - 4,165,589 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247304,161,204 - 4,165,554 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015043   ⟹   ENSCLAP00000014884
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555322,112,771 - 2,115,952 (-)Ensembl
RefSeq Acc Id: XM_005410257   ⟹   XP_005410314
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555322,113,016 - 2,116,093 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005410314 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005410314   ⟸   XM_005410257
- UniProtKB: A0A8C2VMR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000014884   ⟸   ENSCLAT00000015043


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010264 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000014884 ENTREZGENE
  ENSCLAP00000014884.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015043 ENTREZGENE
  ENSCLAT00000015043.1 UniProtKB/TrEMBL
Gene3D-CATH 3.20.20.70 UniProtKB/TrEMBL
InterPro Aldolase_TIM UniProtKB/TrEMBL
  Glycoside_hydrolase_SF UniProtKB/TrEMBL
  Hyaluronidase UniProtKB/TrEMBL
NCBI Gene Hyal1 ENTREZGENE
PANTHER PTHR11769 UniProtKB/TrEMBL
Pfam Glyco_hydro_56 UniProtKB/TrEMBL
PIRSF Hyaluronidase UniProtKB/TrEMBL
PRINTS GLHYDRLASE56 UniProtKB/TrEMBL
Superfamily-SCOP SSF51445 UniProtKB/TrEMBL
UniProt A0A8C2VMR4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-08-07 Hyal1  hyaluronidase 1    hyaluronoglucosaminidase 1  Symbol and/or name change 5135510 APPROVED