Rint1 (RAD50 interactor 1) - Rat Genome Database

Name: Rint1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Rint1 (RAD50 interactor 1) Chinchilla lanigera

Analyze

Symbol:

Rint1

Name:

RAD50 interactor 1

RGD ID:

8916375

Description:

INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

RAD50-interacting protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RINT1 (RAD50 interactor 1)	NCBI	Ortholog
Mus musculus (house mouse):	Rint1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rint1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RINT1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RINT1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rint1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RINT1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RINT1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rint1 (RAD50 interactor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	10,121,219 - 10,144,748 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	10,121,322 - 10,144,748 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Liver Failure (ISO)

genetic disease (ISO)

hereditary breast ovarian cancer syndrome (ISO)

Hereditary Neoplastic Syndromes (ISO)

Infantile Liver Failure Syndrome 3 (ISO)

pleomorphic xanthoastrocytoma (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitotic G2 DNA damage checkpoint signaling (ISO)

regulation of ER to Golgi vesicle-mediated transport (ISO)

Cellular Component

Dsl1/NZR complex (ISO)

endoplasmic reticulum (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Rint1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	10,121,219 - 10,144,748 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	10,121,322 - 10,144,748 (+)	NCBI	ChiLan1.0	ChiLan1.0

RINT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	105,532,201 - 105,567,677 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	105,532,169 - 105,567,677 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	105,172,648 - 105,208,124 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	104,959,768 - 104,995,360 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	99,977,643 - 100,013,242 (+)	NCBI		Celera
Cytogenetic Map	7	q22.3	NCBI
HuRef	7	99,530,826 - 99,566,401 (+)	NCBI		HuRef
CHM1_1	7	105,105,839 - 105,141,438 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	106,846,396 - 106,881,882 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	104,533,083 - 104,568,680 (+)	NCBI

Rint1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	23,992,700 - 24,028,582 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	23,992,709 - 24,025,367 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	23,787,698 - 23,823,584 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	23,787,711 - 23,820,369 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	23,293,562 - 23,326,187 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	23,297,809 - 23,330,434 (+)	NCBI		MGSCv36	mm8
Celera	5	20,736,899 - 20,771,775 (+)	NCBI		Celera
Cytogenetic Map	5	A3	NCBI
cM Map	5	10.45	NCBI

Rint1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	12,211,806 - 12,248,117 (-)	NCBI		GRCr8
mRatBN7.2	4	11,319,416 - 11,355,740 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	11,320,955 - 11,355,736 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	16,472,326 - 16,506,568 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	12,297,437 - 12,331,722 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	10,644,302 - 10,678,548 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	7,851,602 - 7,885,446 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	7,852,224 - 7,885,301 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	7,859,660 - 7,893,315 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	6,691,863 - 6,728,969 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	6,934,752 - 6,968,412 (-)	NCBI		Celera
Cytogenetic Map	4	q11	NCBI

RINT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	142,382,888 - 142,418,404 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	190,652,860 - 190,689,673 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	97,522,208 - 97,567,897 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	110,252,778 - 110,287,708 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	110,252,776 - 110,287,702 (+)	Ensembl	panpan1.1		panPan2

RINT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	14,843,820 - 14,877,334 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	14,843,829 - 14,877,607 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	14,494,854 - 14,528,503 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	15,146,297 - 15,179,923 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	15,144,991 - 15,179,914 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	14,932,259 - 14,966,162 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	14,855,205 - 14,888,884 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	15,135,240 - 15,169,303 (-)	NCBI		UU_Cfam_GSD_1.0

Rint1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	57,188,240 - 57,216,438 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936479	18,311,699 - 18,340,816 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936479	18,311,698 - 18,334,946 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RINT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	105,392,864 - 105,430,160 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	105,392,853 - 105,430,198 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	116,160,107 - 116,194,692 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RINT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	74,454,916 - 74,491,057 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	74,454,947 - 74,490,768 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	29,425,277 - 29,462,578 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rint1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624739	24,008,072 - 24,039,215 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624739	24,011,327 - 24,039,146 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005377249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013510527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01010792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01158170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000007340 ⟹ ENSCLAP00000007226

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	10,121,219 - 10,144,748 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000007341 ⟹ ENSCLAP00000007227

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955410	10,121,479 - 10,144,372 (+)	Ensembl

RefSeq Acc Id:

XM_005377249 ⟹ XP_005377306

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	10,121,322 - 10,144,748 (+)	NCBI

Sequence:

show sequence

CTGGGAGGAGAGGGAGGAACCGGAGACTGCGGGAGGAAGTCGAGGTGGCTCACCTCTCTGCGGC
CTCGGAGCCGCGCCGCCCAGTGTCGCCGGGCGGAGTCCGACCCCGCGAGCCCCGCTGGCTGCGC
GTGGCGCCGGGGACTCGCGCGGAGCCATGATGCTCCTGGCCGGCGAGATCGGCGAGGCTCCGGC
AGCCCCGTGCTGCCCCGAGAGTGGTGACGAGAGGAAGAGCATGGAGGAGAAAAGTGACATAAAT
GTCGCAGCTTCTGTTGGAAGTGAACAAGTCAGCGAAGGTACAGATGATGATCTTCCTTCTTATG
TGTCTGCGTTCATAGAAAAGGAAGTTGGAAATGACCTGAAATCTTTAAAGAAGCTTGATAAACT
CATAGAACAAATGACAGAAAGTAAAGTAAAGTTAGAAGAGGAGGTTCTTACAGTTTCATCAGAA
ATTCCTAAAAGAATTCAAAGTGCCTTAAAAAATGCGGAAGAATCAAAGCAATCCCTTAATCAGT
TTCTGGAGCAAGAAACCCATCTCTTCAGTTCTATCAGTAGCCACTTGCTGACCGCACAGCCCTG
GATGGACGACCTTGGGGCCATGATTAGCCAAATCGAAGAGATTGAACGGCATCTTGCCTACCTT
AAGTGGATTTCGCAAATTGAAGAACTAAGTGATAACATTCAGCAATATCTGATGACCAACAATG
TGCCGGAGGCAGCTTCCACCCTGGTGGCCATGACACAACTTGATATCAAGCTTCAGGAATCGTC
CTGTGCACATCTTCTTGGCTTCATGAGAGCCACAGTGAAGTTCTGGCACAAGATTCTCAAGGAC
AAGCTTACAAGCGACTTTGAGGAGATTTTAACCCAGCTCCACTGGCCATTCATCACACCTCCGC
AGTCTCAGGCCGTGGGTGTGAGCCGGCCTGCCAGCAGCCCTGAGCTCTATGGCAACCTAGAGAC
GCTGTTCTGTCAGCTGCTGAAACTGCAAACCTCAGATGAATTACTCACTGAGCCAGAACAGCTC
CCAGAGAAATACTGTCTCCCCGCGTCCCCTGCCATCATCCTGCCCATACAGGTCATGCTGACTC
CCCTTCAGAAGAGGTTCCGCTACCACTTCCGAGGCAACCGGCAGACCAATGTCATAAGCAAGCC
CGAATGGTACCTGGCTCAGGTACTTATGTGGATTGGAAACCACACTCAATTTCTGGATGAGAAG
ATTCAGCCAATATTGGACAAAGCAGGCTCTGCAGTAAATGCGCGGCTGGAATTTTCCCGGGGCC
TGATGATGCTGGTTCTTGAGAAGTTGGCTTCGGATATTCCTTGTCTGCTGTATGATGACAATCT
CTTCTGTCACCTGGTGGACGAGGTGCTCCTGTTTGAAAGGGAGCTCCATAGTGCTCACGGCTAC
CCCGGCACTTTCGCCAGCTGCATGCACATTCTGTCCGAGGAAACGTGCTTTCAGCGATGGTTAA
CTGTGGAGAGAAAATTTGCTCTTCAAAAAATGGACTCAATGCTGTCATCAGAGGTGGCCTGGGT
ATCCCAGTATAAGGATATCACTGATGTGGATGAAATGAAAGTTCCAGATTGTGCAGAAACTTTT
ATGACTCTACTCTTGGTTATAACTGACAGGTATAAAAACCTCCCCATGGCCTCCCGGAAGCTGC
AGTTCCTGGAGCTGCAGAAGGACCTGGTGGATGACTTCAGGATACGGCTAACGCAGGTGATGAA
GGAGGAGACCCGAGCCCCGCTGGGCTTCCGGTACTGCGCGATCCTCAATGCTGTGAACTACATC
CTGGTGGTGCTCGCAGACTGGGCTGACAACGTTTTTTTCCTGCAGCTTCAGCAGGCAGCATTGG
AGGTGCTGGCAGAGAGTAATACGCTCAGCAAGCTGCAGTTGGGACAGCTGGCCTCCATGGAGAG
CTCCGTCTTCGACGACATGGTCAGCCTCTTAGAGCGCTTAAAGCATGACATGCTGGCCCGGCAA
GTAGACCATGCTTTTAGAGAAGTTAAAGACGCCGCAAAGCTGTATAAGAAAGAAAGGTGGCTGT
CCTTGCCATCCCAGTCGGAACAGGCCGTGATGTCGCTTTCCAGCTCGGCTTGCCCGTTCCTGCT
CACCTTACGGGACCGTCTGCTGCAGCTGGAGCAGCAGCTGTGCTTCTCCTTGTTTAAAATGTTC
TGGCAGATGCTGGTGGAGAAGCTGGATGTGTACCTCTACCAGGAGGTCATTCTTGCGAATCACT
TCAATGAAGGCGGAGCGGCCCAGCTGCAGTTTGATATGACTCGAAATCTTTTCCCCTTGTTTTC
TCACTATTGCAAGAGGCCAGAAAATTATTTTAAACACGTGAAAGAGGCCTGTGTTGTTCTGAAT
CTGAACGTCGGCTCCGCGTTGCTTCTCAAAGACGTGCTGCAGTCAGCTTCAGGTCAGCCTCCCG
CCACGGCAGCACTGAATGAAGTTGGCATTTACAAACTGGCTCAACGGGACGTTGAGATTTTGCT
TAACTTGAGGACAAACTGGCCTAACACAGGCAGATAATTGGCCTTTCAGAAGAAGGTGGTTTTT
TTTTTTAATCAAAAAGGCAGTTGGATTTCAAGTTGTACGACAGAGCTGTGAATTAATGAAACTG
GATAAATGAAAACTTTACAGAATCATTTATTAGTTTGGATTGGTGGTGTTACTAAAATGCCTTC
CAGATTTTCCAAGTCCTCTTGTTCCTAAGAAAATAAAAAAGTAGAAATCTCAGAAACTATGAAA
ACTCAGATTCTGTTTACAAATATAATGCTGCGTCTGTGTGTTGAAAAGAAATACAAGAGCAAAG
ATAAATTATATTTAACGTTTAGGCTACTGTGCTAATTAAAGAACAGTCTGTTAAAGATAATCAG
ACGCAGCCAATAAAATATTTTAAACTATT

hide sequence

RefSeq Acc Id:

XM_013510527 ⟹ XP_013365981

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955410	10,121,376 - 10,144,748 (+)	NCBI

Sequence:

show sequence

TCTCTGCGGCCTCGGAGCCGCGCCGCCCAGTGTCGCCGGGCGGAGTCCGACCCCGCGAGCCCCG
CTGGCTGCGCGTGGCGCCGGGGACTCGCGCGGAGCCATGATGCTCCTGGCCGGCGAGATCGGCG
AGGCTCCGGCAGCCCCGTGCTGCCCCGAGAGTGGTGACGAGAGGAAGAGCATGGAGGAGAAAAG
TGACATAAATGTCGCAGCTTCTGTTGGAAGTGAACAAGTCAGCGAAGGTACAGATGATGATCTT
CCTTCTTATGTGTCTGCGTTCATAGAAAAGGAAGTTGGAAATGACCTGAAATCTTTAAAGAAGC
TTGATAAACTCATAGAACAAATGACAGAAAGTAAAGTAAAGTTAGAAGAGGAGGTTCTTACAGT
TTCATCAGAAATTCCTAAAAGAATTCAAAGTGCCTTAAAAAATGCGGAAGAATCAAAGCAATCC
CTTAATCAGTTTCTGGAGCAAGAAACCCATCTCTTCAGTTCTATCAGTAGCCACTTGCTGACCG
CACAGCCCTGGATGGACGACCTTGGGGCCATGATTAGCCAAATCGAAGAGATTGAACGGCATCT
TGCCTACCTTAAGTGGATTTCGCAAATTGAAGAACTAAGTGATAACATTCAGCAATATCTGATG
ACCAACAATGTGCCGGAGGCAGCTTCCACCCTGGTGGCCATGACACAACTTGATATCAAGCTTC
AGGAATCGTCCTGTGCACATCTTCTTGGCTTCATGAGAGCCACAGTGAAGTTCTGGCACAAGAT
TCTCAAGGACAAGCTTACAAGCGACTTTGAGGAGATTTTAACCCAGCTCCACTGGCCATTCATC
ACACCTCCGCAGTCTCAGGCCGTGGGTGTGAGCCGGCCTGCCAGCAGCCCTGAGCTCTATGGCA
ACCTAGAGACGCTGTTCTGTCAGCTGCTGAAACTGCAAACCTCAGATGAATTACTCACTGAGCC
AGAACAGCTCCCAGAGAAATACTGTCTCCCCGCGTCCCCTGCCATCATCCTGCCCATACAGGTC
ATGCTGACTCCCCTTCAGAAGAGGTTCCGCTACCACTTCCGAGGCAACCGGCAGACCAATGTCA
TAAGCAAGCCCGAATGGTACCTGGCTCAGGTACTTATGTGGATTGGAAACCACACTCAATTTCT
GGATGAGAAGATTCAGCCAATATTGGACAAAGCAGGCTCTGCAGTAAATGCGCGGCTGGAATTT
TCCCGGGGCCTGATGATGCTGGTTCTTGAGAAGTTGGCTTCGGATATTCCTTGTCTGCTGTATG
ATGACAATCTCTTCTGTCACCTGGTGGACGAGGTGCTCCTGTTTGAAAGGGAGCTCCATAGTGC
TCACGGCTACCCCGGCACTTTCGCCAGCTGCATGCACATTCTGTCCGAGGAAACGTGCTTTCAG
CGATGGTTAACTGTGGAGAGAAAATTTGCTCTTCAAAAAATGGACTCAATGCTGTCATCAGAGG
TGGCCTGGGTATCCCAGTATAAGGATATCACTGATGTGGATGAAATGAAAGTTCCAGATTGTGC
AGAAACTTTTATGACTCTACTCTTGGTTATAACTGACAGGTATAAAAACCTCCCCATGGCCTCC
CGGAAGCTGCAGTTCCTGGAGCTGCAGAAGGACCTGGTGGATGACTTCAGGATACGGCTAACGC
AGTTTTTCCTGCAGCTTCAGCAGGCAGCATTGGAGGTGCTGGCAGAGAGTAATACGCTCAGCAA
GCTGCAGTTGGGACAGCTGGCCTCCATGGAGAGCTCCGTCTTCGACGACATGGTCAGCCTCTTA
GAGCGCTTAAAGCATGACATGCTGGCCCGGCAAGTAGACCATGCTTTTAGAGAAGTTAAAGACG
CCGCAAAGCTGTATAAGAAAGAAAGGTGGCTGTCCTTGCCATCCCAGTCGGAACAGGCCGTGAT
GTCGCTTTCCAGCTCGGCTTGCCCGTTCCTGCTCACCTTACGGGACCGTCTGCTGCAGCTGGAG
CAGCAGCTGTGCTTCTCCTTGTTTAAAATGTTCTGGCAGATGCTGGTGGAGAAGCTGGATGTGT
ACCTCTACCAGGAGGTCATTCTTGCGAATCACTTCAATGAAGGCGGAGCGGCCCAGCTGCAGTT
TGATATGACTCGAAATCTTTTCCCCTTGTTTTCTCACTATTGCAAGAGGCCAGAAAATTATTTT
AAACACGTGAAAGAGGCCTGTGTTGTTCTGAATCTGAACGTCGGCTCCGCGTTGCTTCTCAAAG
ACGTGCTGCAGTCAGCTTCAGGTCAGCCTCCCGCCACGGCAGCACTGAATGAAGTTGGCATTTA
CAAACTGGCTCAACGGGACGTTGAGATTTTGCTTAACTTGAGGACAAACTGGCCTAACACAGGC
AGATAATTGGCCTTTCAGAAGAAGGTGGTTTTTTTTTTTAATCAAAAAGGCAGTTGGATTTCAA
GTTGTACGACAGAGCTGTGAATTAATGAAACTGGATAAATGAAAACTTTACAGAATCATTTATT
AGTTTGGATTGGTGGTGTTACTAAAATGCCTTCCAGATTTTCCAAGTCCTCTTGTTCCTAAGAA
AATAAAAAAGTAGAAATCTCAGAAACTATGAAAACTCAGATTCTGTTTACAAATATAATGCTGC
GTCTGTGTGTTGAAAAGAAATACAAGAGCAAAGATAAATTATATTTAACGTTTAGGCTACTGTG
CTAATTAAAGAACAGTCTGTTAAAGATAATCAGACGCAGCCAATAAAATATTTTAAACTATT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005377306	(Get FASTA)	NCBI Sequence Viewer
	XP_013365981	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007226
	ENSCLAP00000007226.1
	ENSCLAP00000007227.1

RefSeq Acc Id:	XP_005377306 ⟸ XM_005377249
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2V3X0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMLLAGEIGEAPAAPCCPESGDERKSMEEKSDINVAASVGSEQVSEGTDDDLPSYVSAFIEKEV GNDLKSLKKLDKLIEQMTESKVKLEEEVLTVSSEIPKRIQSALKNAEESKQSLNQFLEQETHLF SSISSHLLTAQPWMDDLGAMISQIEEIERHLAYLKWISQIEELSDNIQQYLMTNNVPEAASTLV AMTQLDIKLQESSCAHLLGFMRATVKFWHKILKDKLTSDFEEILTQLHWPFITPPQSQAVGVSR PASSPELYGNLETLFCQLLKLQTSDELLTEPEQLPEKYCLPASPAIILPIQVMLTPLQKRFRYH FRGNRQTNVISKPEWYLAQVLMWIGNHTQFLDEKIQPILDKAGSAVNARLEFSRGLMMLVLEKL ASDIPCLLYDDNLFCHLVDEVLLFERELHSAHGYPGTFASCMHILSEETCFQRWLTVERKFALQ KMDSMLSSEVAWVSQYKDITDVDEMKVPDCAETFMTLLLVITDRYKNLPMASRKLQFLELQKDL VDDFRIRLTQVMKEETRAPLGFRYCAILNAVNYILVVLADWADNVFFLQLQQAALEVLAESNTL SKLQLGQLASMESSVFDDMVSLLERLKHDMLARQVDHAFREVKDAAKLYKKERWLSLPSQSEQA VMSLSSSACPFLLTLRDRLLQLEQQLCFSLFKMFWQMLVEKLDVYLYQEVILANHFNEGGAAQL QFDMTRNLFPLFSHYCKRPENYFKHVKEACVVLNLNVGSALLLKDVLQSASGQPPATAALNEVG IYKLAQRDVEILLNLRTNWPNTGR hide sequence

RefSeq Acc Id:	XP_013365981 ⟸ XM_013510527
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V3X0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMLLAGEIGEAPAAPCCPESGDERKSMEEKSDINVAASVGSEQVSEGTDDDLPSYVSAFIEKEV GNDLKSLKKLDKLIEQMTESKVKLEEEVLTVSSEIPKRIQSALKNAEESKQSLNQFLEQETHLF SSISSHLLTAQPWMDDLGAMISQIEEIERHLAYLKWISQIEELSDNIQQYLMTNNVPEAASTLV AMTQLDIKLQESSCAHLLGFMRATVKFWHKILKDKLTSDFEEILTQLHWPFITPPQSQAVGVSR PASSPELYGNLETLFCQLLKLQTSDELLTEPEQLPEKYCLPASPAIILPIQVMLTPLQKRFRYH FRGNRQTNVISKPEWYLAQVLMWIGNHTQFLDEKIQPILDKAGSAVNARLEFSRGLMMLVLEKL ASDIPCLLYDDNLFCHLVDEVLLFERELHSAHGYPGTFASCMHILSEETCFQRWLTVERKFALQ KMDSMLSSEVAWVSQYKDITDVDEMKVPDCAETFMTLLLVITDRYKNLPMASRKLQFLELQKDL VDDFRIRLTQFFLQLQQAALEVLAESNTLSKLQLGQLASMESSVFDDMVSLLERLKHDMLARQV DHAFREVKDAAKLYKKERWLSLPSQSEQAVMSLSSSACPFLLTLRDRLLQLEQQLCFSLFKMFW QMLVEKLDVYLYQEVILANHFNEGGAAQLQFDMTRNLFPLFSHYCKRPENYFKHVKEACVVLNL NVGSALLLKDVLQSASGQPPATAALNEVGIYKLAQRDVEILLNLRTNWPNTGR hide sequence

RefSeq Acc Id:

ENSCLAP00000007227 ⟸ ENSCLAT00000007341

RefSeq Acc Id:

ENSCLAP00000007226 ⟸ ENSCLAT00000007340

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005086	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007340	ENTREZGENE
	ENSCLAT00000007340.1	UniProtKB/TrEMBL
	ENSCLAT00000007341.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.670	UniProtKB/TrEMBL
InterPro	EXOC6PINT-1/Sec15/Tip20_C_dom2	UniProtKB/TrEMBL
	RINT1_Tip20	UniProtKB/TrEMBL
NCBI Gene	Rint1	ENTREZGENE
PANTHER	PTHR13520	UniProtKB/TrEMBL
	RAD50-INTERACTING PROTEIN 1	UniProtKB/TrEMBL
Pfam	RINT1_TIP1	UniProtKB/TrEMBL
PROSITE	RINT1_TIP20	UniProtKB/TrEMBL
UniProt	A0A8C2UYF8_CHILA	UniProtKB/TrEMBL
	A0A8C2V3X0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM