Cdc25b (cell division cycle 25B) - Rat Genome Database

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Gene: Cdc25b (cell division cycle 25B) Chinchilla lanigera
Analyze
Symbol: Cdc25b
Name: cell division cycle 25B
RGD ID: 8912430
Description: ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN female meiosis I (ortholog); oocyte maturation (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diastolic heart failure (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: M-phase inducer phosphatase 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541514,629,132 - 14,650,116 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541514,637,295 - 14,647,181 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (ISO)
cytoplasm  (ISO)
nucleus  (ISO)
spindle pole  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cdc25b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541514,629,132 - 14,650,116 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541514,637,295 - 14,647,181 (+)NCBIChiLan1.0ChiLan1.0
CDC25B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38203,786,951 - 3,806,115 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl203,786,772 - 3,806,121 (+)EnsemblGRCh38hg38GRCh38
GRCh37203,767,598 - 3,786,762 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36203,724,401 - 3,734,762 (+)NCBINCBI36Build 36hg18NCBI36
Celera203,838,270 - 3,848,633 (+)NCBICelera
Cytogenetic Map20p13NCBI
HuRef203,724,986 - 3,735,364 (+)NCBIHuRef
CHM1_1203,776,654 - 3,787,027 (+)NCBICHM1_1
T2T-CHM13v2.0203,817,891 - 3,837,037 (+)NCBIT2T-CHM13v2.0
Cdc25b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392131,028,356 - 131,040,431 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2131,028,869 - 131,040,417 (+)EnsemblGRCm39 Ensembl
GRCm382131,186,436 - 131,198,511 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2131,186,949 - 131,198,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv372131,012,687 - 131,024,233 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362130,878,520 - 130,889,906 (+)NCBIMGSCv36mm8
Celera2132,410,981 - 132,422,509 (+)NCBICelera
Cytogenetic Map2F1NCBI
cM Map263.29NCBI
Cdc25b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83138,860,148 - 138,870,287 (+)NCBIGRCr8
mRatBN7.23118,407,127 - 118,417,272 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3118,407,128 - 118,417,272 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3122,301,484 - 122,311,583 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03130,900,852 - 130,910,946 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03128,557,585 - 128,567,684 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03123,731,539 - 123,741,696 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,731,539 - 123,741,339 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03130,229,228 - 130,239,385 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,893,716 - 118,903,516 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13118,799,288 - 118,809,089 (+)NCBI
Celera3117,215,222 - 117,225,031 (+)NCBICelera
Cytogenetic Map3q36NCBI
CDC25B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2214,749,003 - 4,769,167 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1204,745,828 - 4,765,995 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0203,877,255 - 3,883,458 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1203,626,097 - 3,645,179 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl203,626,107 - 3,645,179 (+)Ensemblpanpan1.1panPan2
CDC25B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12417,552,206 - 17,561,791 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2417,553,316 - 17,561,759 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2417,381,964 - 17,391,536 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02417,971,255 - 17,980,600 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2417,971,273 - 17,980,568 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12417,566,166 - 17,575,511 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02417,676,969 - 17,686,318 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02418,004,858 - 18,014,203 (-)NCBIUU_Cfam_GSD_1.0
Cdc25b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640166,465,682 - 166,482,670 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648514,897,050 - 14,914,034 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC25B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1731,910,825 - 31,929,242 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11731,910,824 - 31,929,418 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21736,244,262 - 36,262,979 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDC25B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1234,482,709 - 34,493,737 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl234,483,771 - 34,494,071 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660719,958,886 - 9,969,775 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdc25b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247414,882,516 - 4,892,925 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247414,871,275 - 4,892,730 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015711   ⟹   ENSCLAP00000015549
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541514,629,132 - 14,650,116 (+)Ensembl
RefSeq Acc Id: XM_013512285   ⟹   XP_013367739
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541514,637,295 - 14,647,181 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013367739 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000015549
  ENSCLAP00000015549.1
Reference Protein Sequences
RefSeq Acc Id: XP_013367739   ⟸   XM_013512285
- UniProtKB: A0A8C2VMM3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000015549   ⟸   ENSCLAT00000015711
Protein Domains
Rhodanese


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010691 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000015711 ENTREZGENE
  ENSCLAT00000015711.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.250.10 UniProtKB/TrEMBL
InterPro MPI_Phosphatase UniProtKB/TrEMBL
  Rhodanese-like_dom UniProtKB/TrEMBL
  Rhodanese-like_dom_sf UniProtKB/TrEMBL
NCBI Gene Cdc25b ENTREZGENE
PANTHER M-PHASE INDUCER PHOSPHATASE 2 UniProtKB/TrEMBL
  M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 UniProtKB/TrEMBL
Pfam M-inducer_phosp UniProtKB/TrEMBL
  Rhodanese UniProtKB/TrEMBL
PRINTS MPIPHPHTASE UniProtKB/TrEMBL
PROSITE RHODANESE_3 UniProtKB/TrEMBL
SMART RHOD UniProtKB/TrEMBL
Superfamily-SCOP SSF52821 UniProtKB/TrEMBL
UniProt A0A8C2VMM3 ENTREZGENE, UniProtKB/TrEMBL