Tesc (tescalcin) - Rat Genome Database

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Gene: Tesc (tescalcin) Chinchilla lanigera
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Symbol: Tesc
Name: tescalcin
RGD ID: 8905403
Description: ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); phosphatase inhibitor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); male gonad development (ortholog); megakaryocyte development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lamellipodium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: calcineurin B homologous protein 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545514,053,443 - 14,092,637 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545514,053,918 - 14,092,637 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Tesc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545514,053,443 - 14,092,637 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545514,053,918 - 14,092,637 (+)NCBIChiLan1.0ChiLan1.0
TESC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl12117,038,923 - 117,099,479 (-)EnsemblGRCh38hg38GRCh38
GRCh3812117,038,923 - 117,099,490 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3712117,476,728 - 117,537,221 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612115,961,111 - 116,021,634 (-)NCBINCBI36hg18NCBI36
Celera12117,106,248 - 117,166,769 (-)NCBI
Cytogenetic Map12q24.22NCBI
HuRef12114,485,557 - 114,546,137 (-)NCBIHuRef
CHM1_112117,444,429 - 117,505,233 (-)NCBICHM1_1
Tesc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395118,165,808 - 118,199,943 (+)NCBIGRCm39mm39
GRCm39 Ensembl5118,165,808 - 118,199,943 (+)Ensembl
GRCm385118,027,743 - 118,061,878 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5118,027,743 - 118,061,878 (+)EnsemblGRCm38mm10GRCm38
MGSCv375118,477,833 - 118,511,879 (+)NCBIGRCm37mm9NCBIm37
MGSCv365118,288,854 - 118,322,900 (+)NCBImm8
Celera5115,122,941 - 115,156,704 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map557.84NCBI
Tesc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21238,521,839 - 38,555,665 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1238,521,861 - 38,555,824 (-)Ensembl
Rnor_6.01244,141,258 - 44,174,701 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1244,141,422 - 44,174,583 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01245,972,890 - 46,006,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41239,669,706 - 39,704,041 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1240,180,191 - 40,225,489 (-)NCBICelera
Cytogenetic Map12q16NCBI
TESC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112117,991,047 - 118,051,370 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12117,991,047 - 118,051,346 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012114,615,155 - 114,675,932 (-)NCBIMhudiblu_PPA_v0panPan3
TESC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12613,645,513 - 13,700,521 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2613,645,511 - 13,689,367 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2613,639,965 - 13,687,307 (-)NCBI
ROS_Cfam_1.02613,905,740 - 13,953,098 (-)NCBI
UMICH_Zoey_3.12613,867,524 - 13,914,859 (-)NCBI
UNSW_CanFamBas_1.02613,944,789 - 13,999,699 (-)NCBI
UU_Cfam_GSD_1.02613,980,002 - 14,027,402 (-)NCBI
Tesc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118154,062,082 - 154,103,256 (-)NCBI
SpeTri2.0NW_0049365585,397,018 - 5,417,335 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TESC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1435,381,918 - 35,452,207 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11435,381,899 - 35,452,215 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21437,601,263 - 37,658,113 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TESC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111112,331,123 - 112,410,901 (-)NCBI
ChlSab1.1 Ensembl11112,327,906 - 112,410,849 (-)Ensembl
Vero_WHO_p1.0NW_023666037132,669,841 - 132,746,806 (+)NCBI
Tesc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474716,189,032 - 16,228,211 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000015151   ⟹   ENSCLAP00000014992
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495545514,053,443 - 14,092,637 (+)Ensembl
RefSeq Acc Id: XM_005396547   ⟹   XP_005396604
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545514,053,918 - 14,092,637 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005396548   ⟹   XP_005396605
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495545514,072,371 - 14,092,637 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005396604 (Get FASTA)   NCBI Sequence Viewer  
  XP_005396605 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005396604   ⟸   XM_005396547
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005396605   ⟸   XM_005396548
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000014992   ⟸   ENSCLAT00000015151


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000010333 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000014992 ENTREZGENE
Ensembl Transcript ENSCLAT00000015151 ENTREZGENE
NCBI Gene Tesc ENTREZGENE