Mtmr9 (myotubularin related protein 9) - Rat Genome Database

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Gene: Mtmr9 (myotubularin related protein 9) Chinchilla lanigera
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Symbol: Mtmr9
Name: myotubularin related protein 9
RGD ID: 8895061
Description: ENCODES a protein that exhibits enzyme regulator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of phosphatase activity (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myotubularin-related protein 9
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540352,689,101 - 52,732,354 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540352,689,101 - 52,732,354 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data
Mtmr9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540352,689,101 - 52,732,354 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540352,689,101 - 52,732,354 (+)NCBIChiLan1.0ChiLan1.0
MTMR9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38811,284,816 - 11,339,526 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl811,284,816 - 11,328,146 (+)EnsemblGRCh38hg38GRCh38
GRCh37811,142,325 - 11,185,655 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36811,179,410 - 11,223,065 (+)NCBINCBI36hg18NCBI36
Build 34811,179,409 - 11,223,062NCBI
Celera810,270,023 - 10,313,681 (+)NCBI
Cytogenetic Map8p23.1NCBI
HuRef810,072,186 - 10,115,823 (+)NCBIHuRef
CHM1_1811,207,294 - 11,250,949 (+)NCBICHM1_1
T2T-CHM13v2.088,410,868 - 8,454,196 (-)NCBI
Mtmr9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391463,757,100 - 63,781,402 (-)NCBIGRCm39mm39
GRCm39 Ensembl1463,757,100 - 63,781,431 (-)Ensembl
GRCm381463,519,651 - 63,544,027 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1463,519,651 - 63,543,982 (-)EnsemblGRCm38mm10GRCm38
MGSCv371464,142,447 - 64,162,790 (-)NCBIGRCm37mm9NCBIm37
MGSCv361462,477,720 - 62,498,063 (-)NCBImm8
Celera1461,293,239 - 61,313,581 (-)NCBICelera
Cytogenetic Map14D1NCBI
Mtmr9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21537,769,161 - 37,791,195 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1537,769,078 - 37,791,244 (-)Ensembl
Rnor_6.01546,697,262 - 46,719,296 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1546,693,383 - 46,719,252 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01550,459,291 - 50,481,325 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41542,787,644 - 42,809,678 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11542,803,275 - 42,824,990 (-)NCBI
Celera1537,452,010 - 37,473,964 (-)NCBICelera
Cytogenetic Map15p12NCBI
MTMR9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Mhudiblu_PPA_v087,864,461 - 7,918,324 (-)NCBIMhudiblu_PPA_v0panPan3
MTMR9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12526,571,383 - 26,624,948 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2526,575,932 - 26,624,954 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2527,227,205 - 27,280,925 (-)NCBI
ROS_Cfam_1.02526,725,336 - 26,778,579 (-)NCBI
ROS_Cfam_1.0 Ensembl2526,725,363 - 26,778,585 (-)Ensembl
UMICH_Zoey_3.12526,679,494 - 26,732,414 (-)NCBI
UNSW_CanFamBas_1.02526,574,592 - 26,627,786 (-)NCBI
UU_Cfam_GSD_1.02526,727,118 - 26,780,650 (-)NCBI
Mtmr9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049435,505,589 - 5,549,796 (-)NCBI
SpeTri2.0NW_0049366753,035,221 - 3,080,419 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTMR9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1414,458,042 - 14,504,449 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11414,457,974 - 14,504,453 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MTMR9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.187,778,065 - 7,821,433 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl87,783,100 - 7,821,103 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605234,607,842 - 34,651,661 (+)NCBIVero_WHO_p1.0
Mtmr9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475824,994,164 - 25,027,682 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462475824,993,783 - 25,033,130 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023683   ⟹   ENSCLAP00000023462
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540352,689,101 - 52,732,354 (+)Ensembl
RefSeq Acc Id: XM_005373811   ⟹   XP_005373868
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540352,689,101 - 52,732,354 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005373868 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005373868   ⟸   XM_005373811
- Sequence:
RefSeq Acc Id: ENSCLAP00000023462   ⟸   ENSCLAT00000023683
Protein Domains
Myotubularin phosphatase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016089 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000023462 ENTREZGENE
  ENSCLAP00000023462.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023683 ENTREZGENE
  ENSCLAT00000023683.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro Myotubularin-like_Pase_dom UniProtKB/TrEMBL
  Myotubularin_fam UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
NCBI Gene Mtmr9 ENTREZGENE
PANTHER PTHR10807 UniProtKB/TrEMBL
Pfam Myotub-related UniProtKB/TrEMBL
PROSITE PPASE_MYOTUBULARIN UniProtKB/TrEMBL
Superfamily-SCOP SSF52799 UniProtKB/TrEMBL
UniProt A0A8C2W3K5_CHILA UniProtKB/TrEMBL