Dcaf8 (DDB1 and CUL4 associated factor 8) - Rat Genome Database
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Gene: Dcaf8 (DDB1 and CUL4 associated factor 8) Chinchilla lanigera
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Symbol: Dcaf8
Name: DDB1 and CUL4 associated factor 8
RGD ID: 8892238
Description: ASSOCIATED WITH giant axonal neuropathy 2 (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: DDB1- and CUL4-associated factor 8
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,991,779 - 12,036,835 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546811,991,779 - 12,037,541 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Dcaf8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,991,779 - 12,036,835 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546811,991,779 - 12,037,541 (-)NCBIChiLan1.0ChiLan1.0
DCAF8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1160,215,715 - 160,262,531 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1160,215,715 - 160,262,549 (-)EnsemblGRCh38hg38GRCh38
GRCh381160,215,720 - 160,262,549 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371160,185,510 - 160,232,339 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh371160,185,505 - 160,232,350 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,452,129 - 158,498,603 (-)NCBINCBI36hg18NCBI36
Build 341156,998,577 - 157,045,052NCBI
Celera1133,254,265 - 133,301,114 (-)NCBI
Cytogenetic Map1q23.2NCBI
HuRef1131,542,143 - 131,588,999 (-)NCBIHuRef
CHM1_11161,580,851 - 161,627,695 (-)NCBICHM1_1
Dcaf8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,975,574 - 172,023,960 (+)NCBIGRCm39mm39
GRCm381172,148,015 - 172,196,393 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,148,084 - 172,197,005 (+)EnsemblGRCm38mm10GRCm38
MGSCv371174,078,146 - 174,126,524 (+)NCBIGRCm37mm9NCBIm37
MGSCv361173,984,817 - 174,032,141 (+)NCBImm8
Celera1175,002,206 - 175,052,357 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.54NCBI
Dcaf8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21384,609,838 - 84,667,025 (+)NCBI
Rnor_6.0 Ensembl1390,532,326 - 90,591,796 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01390,532,153 - 90,587,542 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01395,053,210 - 95,114,044 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41388,029,285 - 88,186,506 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11388,218,174 - 88,375,388 (+)NCBI
Celera1384,221,681 - 84,268,071 (+)NCBICelera
Cytogenetic Map13q24NCBI
DCAF8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11139,490,846 - 139,537,816 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1139,490,069 - 139,537,572 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01135,569,736 - 135,616,614 (-)NCBIMhudiblu_PPA_v0panPan3
DCAF8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl3821,959,254 - 21,999,677 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.13821,959,228 - 22,001,388 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dcaf8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936740368,795 - 415,997 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCAF8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl490,197,088 - 90,261,551 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1490,214,916 - 90,263,259 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2498,104,312 - 98,150,952 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DCAF8
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1203,685,340 - 3,731,323 (+)NCBI
ChlSab1.1 Ensembl203,703,641 - 3,729,479 (+)Ensembl
Dcaf8
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624794996,012 - 1,041,301 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000021778   ⟹   ENSCLAP00000021575
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495546811,991,779 - 12,036,835 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000021779   ⟹   ENSCLAP00000021576
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495546811,993,599 - 12,016,867 (-)Ensembl
RefSeq Acc Id: XM_005400200   ⟹   XP_005400257
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546811,991,779 - 12,037,374 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005400201   ⟹   XP_005400258
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546811,991,779 - 12,037,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005400202   ⟹   XP_005400259
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546811,991,779 - 12,037,540 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522419   ⟹   XP_013377873
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495546811,991,779 - 12,037,541 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005400257 (Get FASTA)   NCBI Sequence Viewer  
  XP_005400258 (Get FASTA)   NCBI Sequence Viewer  
  XP_005400259 (Get FASTA)   NCBI Sequence Viewer  
  XP_013377873 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005400259   ⟸   XM_005400202
- Sequence:
RefSeq Acc Id: XP_005400257   ⟸   XM_005400200
- Sequence:
RefSeq Acc Id: XP_005400258   ⟸   XM_005400201
- Sequence:
RefSeq Acc Id: XP_013377873   ⟸   XM_013522419
- Sequence:
RefSeq Acc Id: ENSCLAP00000021575   ⟸   ENSCLAT00000021778
RefSeq Acc Id: ENSCLAP00000021576   ⟸   ENSCLAT00000021779


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014765 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000021575 ENTREZGENE
  ENSCLAP00000021576 ENTREZGENE
Ensembl Transcript ENSCLAT00000021778 ENTREZGENE
  ENSCLAT00000021779 ENTREZGENE
NCBI Gene Dcaf8 ENTREZGENE