Lxn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955448 | 9,414,721 - 9,421,575 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955448 | 9,414,721 - 9,421,575 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LXN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 158,666,414 - 158,672,648 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 158,645,822 - 158,672,648 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 158,384,203 - 158,390,437 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 159,866,900 - 159,873,176 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 159,866,907 - 159,873,184 | NCBI | | | | | Celera | 3 | 156,806,788 - 156,813,067 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q25.32 | NCBI | | | | | HuRef | 3 | 155,780,049 - 155,786,328 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 158,347,170 - 158,353,449 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 161,440,336 - 161,446,570 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lxn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 67,365,332 - 67,371,240 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 67,365,331 - 67,371,259 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 67,457,999 - 67,463,907 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 67,457,998 - 67,463,926 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 67,261,921 - 67,267,829 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 67,545,928 - 67,551,836 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 67,584,098 - 67,590,006 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | E1 | NCBI | | | | | cM Map | 3 | 30.98 | NCBI | | | | |
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Lxn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 154,037,604 - 154,043,473 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 151,727,556 - 151,733,426 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 151,727,102 - 151,733,460 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 158,844,126 - 158,849,894 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 156,894,624 - 156,900,393 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 151,527,375 - 151,533,143 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 164,628,565 - 164,634,434 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 164,628,566 - 164,634,434 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 183,977,968 - 183,983,837 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 157,310,036 - 157,315,905 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 157,259,999 - 157,265,868 (-) | NCBI | | | | | Celera | 2 | 146,097,077 - 146,102,946 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q32 | NCBI | | | | |
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LXN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 156,608,664 - 156,617,760 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 156,613,379 - 156,619,970 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 155,692,283 - 155,698,605 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 163,743,319 - 163,749,614 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 163,743,319 - 163,749,614 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LXN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 23 | 51,962,877 - 51,968,447 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 51,962,873 - 51,969,172 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 51,772,677 - 51,778,236 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 52,601,679 - 52,609,457 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 52,603,873 - 52,610,212 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 52,182,014 - 52,189,772 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 52,234,990 - 52,242,749 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 52,520,422 - 52,528,212 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lxn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 84,460,719 - 84,466,968 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936519 | 5,266,664 - 5,273,245 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936519 | 5,266,988 - 5,273,227 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LXN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 98,435,320 - 98,441,785 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 98,435,318 - 98,441,823 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 106,728,207 - 106,734,674 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LXN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 15 | 32,170,100 - 32,177,239 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 32,171,183 - 32,180,384 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 4,734,054 - 4,740,325 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lxn (Heterocephalus glaber - naked mole-rat) |
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