Slc16a7 (solute carrier family 16 member 7) - Rat Genome Database

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Gene: Slc16a7 (solute carrier family 16 member 7) Chinchilla lanigera
Analyze
Symbol: Slc16a7
Name: solute carrier family 16 member 7
RGD ID: 8889012
Description: ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: monocarboxylate transporter 2; solute carrier family 16 (monocarboxylate transporter), member 7
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554587,232,886 - 7,352,782 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554587,232,886 - 7,352,782 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
obesity  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References


Genomics

Comparative Map Data
Slc16a7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554587,232,886 - 7,352,782 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554587,232,886 - 7,352,782 (+)NCBIChiLan1.0ChiLan1.0
SLC16A7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1259,596,029 - 59,789,855 (+)EnsemblGRCh38hg38GRCh38
GRCh381259,595,934 - 59,789,841 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371259,989,810 - 60,183,622 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361258,369,393 - 58,461,675 (+)NCBINCBI36hg18NCBI36
Build 341258,369,392 - 58,461,674NCBI
Celera1259,745,720 - 59,838,012 (+)NCBI
Cytogenetic Map12q14.1NCBI
HuRef1257,038,268 - 57,232,240 (+)NCBIHuRef
CHM1_11259,958,039 - 60,151,803 (+)NCBICHM1_1
Slc16a7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910125,055,139 - 125,225,455 (-)NCBIGRCm39mm39
GRCm39 Ensembl10125,055,139 - 125,225,334 (-)Ensembl
GRCm3810125,219,270 - 125,389,586 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10125,219,270 - 125,389,465 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710124,664,541 - 124,765,591 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610124,630,545 - 124,731,595 (-)NCBImm8
Celera10127,630,780 - 127,731,940 (-)NCBICelera
Cytogenetic Map10D3NCBI
Slc16a7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2761,043,667 - 61,211,547 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl761,051,167 - 61,154,994 (-)Ensembl
Rnor_6.0768,438,341 - 68,606,312 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl768,446,193 - 68,549,763 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0768,633,417 - 68,801,189 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4765,210,148 - 65,313,572 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1765,230,721 - 65,390,741 (-)NCBI
Celera758,206,868 - 58,309,915 (-)NCBICelera
Cytogenetic Map7q22NCBI
SLC16A7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11229,390,576 - 29,587,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1229,390,576 - 29,528,851 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01229,128,600 - 29,317,797 (-)NCBIMhudiblu_PPA_v0panPan3
SLC16A7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1103,333,000 - 3,500,684 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl103,334,126 - 3,496,150 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha103,398,668 - 3,564,721 (+)NCBI
ROS_Cfam_1.0103,356,472 - 3,522,599 (+)NCBI
UMICH_Zoey_3.1103,323,639 - 3,489,625 (+)NCBI
UNSW_CanFamBas_1.0103,565,685 - 3,731,591 (+)NCBI
UU_Cfam_GSD_1.0103,691,746 - 3,857,780 (+)NCBI
Slc16a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl524,713,267 - 24,875,003 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1524,713,009 - 24,871,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2526,710,139 - 26,864,757 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11155,541,313 - 55,709,102 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1155,645,129 - 55,708,356 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037190,169,996 - 190,345,973 (-)NCBIVero_WHO_p1.0
Slc16a7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248028,015,061 - 8,191,031 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000017373   ⟹   ENSCLAP00000017204
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554587,232,886 - 7,352,782 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000017374   ⟹   ENSCLAP00000017205
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554587,239,191 - 7,347,628 (+)Ensembl
RefSeq Acc Id: XM_005397423   ⟹   XP_005397480
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554587,232,886 - 7,352,782 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005397424   ⟹   XP_005397481
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554587,273,540 - 7,352,782 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005397425   ⟹   XP_005397482
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554587,250,908 - 7,352,782 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005397427   ⟹   XP_005397484
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554587,328,221 - 7,352,782 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005397480 (Get FASTA)   NCBI Sequence Viewer  
  XP_005397481 (Get FASTA)   NCBI Sequence Viewer  
  XP_005397482 (Get FASTA)   NCBI Sequence Viewer  
  XP_005397484 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005397480   ⟸   XM_005397423
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005397482   ⟸   XM_005397425
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005397481   ⟸   XM_005397424
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005397484   ⟸   XM_005397427
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000017205   ⟸   ENSCLAT00000017374
RefSeq Acc Id: ENSCLAP00000017204   ⟸   ENSCLAT00000017373


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011812 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000017205 ENTREZGENE
Ensembl Transcript ENSCLAT00000017374 ENTREZGENE
NCBI Gene Slc16a7 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Slc16a7  solute carrier family 16 member 7    solute carrier family 16 (monocarboxylate transporter), member 7  Symbol and/or name change 5135510 APPROVED