Serinc2 (serine incorporator 2) - Rat Genome Database

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Gene: Serinc2 (serine incorporator 2) Chinchilla lanigera
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Symbol: Serinc2
Name: serine incorporator 2
RGD ID: 8886352
Description: INVOLVED IN phosphatidylserine metabolic process (ortholog); positive regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); positive regulation of serine C-palmitoyltransferase activity (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554529,892,657 - 9,915,018 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554529,905,152 - 9,914,943 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Serinc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554529,892,657 - 9,915,018 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554529,905,152 - 9,914,943 (+)NCBIChiLan1.0ChiLan1.0
SERINC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38131,409,777 - 31,434,678 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl131,409,565 - 31,434,680 (+)EnsemblGRCh38hg38GRCh38
GRCh37131,882,624 - 31,907,525 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36131,658,550 - 31,680,112 (+)NCBINCBI36hg18NCBI36
Celera130,143,213 - 30,168,046 (+)NCBI
Cytogenetic Map1p35.2NCBI
HuRef129,989,453 - 30,017,892 (+)NCBIHuRef
CHM1_1131,998,320 - 32,023,476 (+)NCBICHM1_1
T2T-CHM13v2.0131,262,102 - 31,291,896 (+)NCBI
Serinc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394130,147,289 - 130,172,993 (-)NCBIGRCm39mm39
GRCm39 Ensembl4130,147,288 - 130,172,998 (-)Ensembl
GRCm384130,253,495 - 130,279,218 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4130,253,495 - 130,279,205 (-)EnsemblGRCm38mm10GRCm38
MGSCv374129,930,741 - 129,952,830 (-)NCBIGRCm37mm9NCBIm37
MGSCv364129,755,801 - 129,777,857 (-)NCBImm8
Celera4128,586,340 - 128,608,383 (-)NCBICelera
Cytogenetic Map4D2.2NCBI
Serinc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25142,592,308 - 142,614,628 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl5142,592,309 - 142,618,364 (-)Ensembl
Rnor_6.05148,470,060 - 148,492,232 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5148,470,061 - 148,492,232 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05152,187,837 - 152,210,009 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45149,279,136 - 149,301,805 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15149,289,176 - 149,312,129 (-)NCBI
Celera5141,059,502 - 141,081,693 (-)NCBICelera
Cytogenetic Map5q36NCBI
SERINC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1131,714,162 - 31,734,906 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl131,710,291 - 31,734,906 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0130,689,645 - 30,714,325 (+)NCBIMhudiblu_PPA_v0panPan3
SERINC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1269,600,349 - 69,618,004 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl269,600,360 - 69,620,946 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha266,179,079 - 66,196,727 (-)NCBI
ROS_Cfam_1.0270,164,791 - 70,182,451 (-)NCBI
ROS_Cfam_1.0 Ensembl270,164,797 - 70,185,345 (-)Ensembl
UMICH_Zoey_3.1267,000,805 - 67,018,460 (-)NCBI
UNSW_CanFamBas_1.0267,997,271 - 68,014,928 (-)NCBI
UU_Cfam_GSD_1.0268,996,787 - 69,014,444 (-)NCBI
Serinc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505848,796,095 - 48,814,379 (+)NCBI
SpeTri2.0NW_00493647414,622,980 - 14,639,159 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SERINC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl687,992,987 - 88,017,130 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1687,992,933 - 88,017,141 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2681,673,720 - 81,680,123 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SERINC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120101,401,526 - 101,423,852 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl20101,401,222 - 101,423,599 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603315,255,491 - 15,289,647 (+)NCBIVero_WHO_p1.0
Serinc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476414,741,902 - 14,766,936 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462476414,744,347 - 14,763,423 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000022012   ⟹   ENSCLAP00000021809
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554529,892,657 - 9,915,018 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000022013   ⟹   ENSCLAP00000021810
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554529,894,501 - 9,914,519 (+)Ensembl
RefSeq Acc Id: XM_013519725   ⟹   XP_013375179
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554529,905,152 - 9,914,943 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013375179 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013375179   ⟸   XM_013519725
- Sequence:
RefSeq Acc Id: ENSCLAP00000021809   ⟸   ENSCLAT00000022012
RefSeq Acc Id: ENSCLAP00000021810   ⟸   ENSCLAT00000022013


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000014936 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000021809 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAP00000021810 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000022012 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAT00000022013 UniProtKB/TrEMBL
NCBI Gene Serinc2 ENTREZGENE
UniProt A0A8C2YTC0_CHILA UniProtKB/TrEMBL
  A0A8C2YTC1_CHILA UniProtKB/TrEMBL