Naa50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) - Rat Genome Database

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Gene: Naa50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) Chinchilla lanigera
Analyze
Symbol: Naa50
Name: N-alpha-acetyltransferase 50, NatE catalytic subunit
RGD ID: 8882771
Description: ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); peptide alpha-N-acetyltransferase activity (ortholog); peptidyl-lysine acetyltransferase activity (ortholog); INVOLVED IN establishment of mitotic sister chromatid cohesion (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N(alpha)-acetyltransferase 50, NatE catalytic subunit; N-alpha-acetyltransferase 50
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
cytosol  (ISO)
NatA complex  (ISO)
nucleolus  (ISO)
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Naa50
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBIChiLan1.0ChiLan1.0
NAA50
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383113,716,458 - 113,746,249 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3113,716,458 - 113,746,300 (-)EnsemblGRCh38hg38GRCh38
GRCh373113,435,305 - 113,465,096 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363114,920,531 - 114,947,786 (-)NCBINCBI36Build 36hg18NCBI36
Build 343114,920,530 - 114,947,786NCBI
Celera3111,846,332 - 111,873,586 (-)NCBICelera
Cytogenetic Map3q13.31NCBI
HuRef3110,810,207 - 110,840,018 (-)NCBIHuRef
CHM1_13113,398,653 - 113,428,466 (-)NCBICHM1_1
T2T-CHM13v2.03116,437,658 - 116,467,450 (-)NCBIT2T-CHM13v2.0
Naa50
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391643,960,154 - 43,983,825 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1643,960,193 - 43,983,729 (+)EnsemblGRCm39 Ensembl
GRCm381644,139,791 - 44,163,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,139,830 - 44,163,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv371644,139,922 - 44,163,477 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361644,059,141 - 44,082,696 (+)NCBIMGSCv36mm8
Celera1644,497,008 - 44,520,827 (+)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.47NCBI
Naa50
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,044,281 - 70,066,754 (-)NCBIGRCr8
mRatBN7.21156,538,366 - 56,560,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1165,351,540 - 65,374,017 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,013,772 - 58,036,254 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,062,496 - 57,085,000 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01161,508,162 - 61,530,830 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01165,614,950 - 65,637,732 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,103,982 - 58,126,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11158,165,242 - 58,184,158 (-)NCBI
Celera1156,091,522 - 56,113,995 (-)NCBICelera
Cytogenetic Map11q21NCBI
NAA50
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22111,714,482 - 111,741,982 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13111,719,261 - 111,746,737 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03110,860,595 - 110,888,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13117,781,455 - 117,808,913 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3117,781,455 - 117,808,913 (-)Ensemblpanpan1.1panPan2
NAA50
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBIUU_Cfam_GSD_1.0
Naa50
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602136,264,699 - 136,285,768 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365361,221,080 - 1,257,263 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365361,221,080 - 1,257,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA50
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,193,231 - 146,222,133 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,778,467 - 155,802,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA50
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12267,113,126 - 67,142,391 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2267,113,123 - 67,139,627 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604199,328,044 - 99,356,888 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Naa50
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473134,781,157 - 34,808,265 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473134,781,120 - 34,808,863 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005386405   ⟹   XP_005386462
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542713,845,806 - 13,868,321 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005386406   ⟹   XP_005386463
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005386462 (Get FASTA)   NCBI Sequence Viewer  
  XP_005386463 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000006875.1
  ENSCLAP00000018378
  ENSCLAP00000018378.1
  ENSCLAP00000018379.1
Reference Protein Sequences
RefSeq Acc Id: XP_005386463   ⟸   XM_005386406
- Peptide Label: isoform X2
- UniProtKB: A0A8C2YL82 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005386462   ⟸   XM_005386405
- Peptide Label: isoform X1
- UniProtKB: A0A8C2YRP5 (UniProtKB/TrEMBL),   A0A8C2YL82 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004843 UniProtKB/TrEMBL
  ENSCLAG00000012597 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000006987.1 UniProtKB/TrEMBL
  ENSCLAT00000018558 ENTREZGENE
  ENSCLAT00000018558.1 UniProtKB/TrEMBL
  ENSCLAT00000018559.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
NCBI Gene Naa50 ENTREZGENE
PANTHER N-ALPHA-ACETYLTRANSFERASE UniProtKB/TrEMBL
  N-ALPHA-ACETYLTRANSFERASE 50 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A8C2VNY6_CHILA UniProtKB/TrEMBL
  A0A8C2YL82 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2YRP5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-12-03 Naa50  N-alpha-acetyltransferase 50, NatE catalytic subunit  Naa50  N(alpha)-acetyltransferase 50, NatE catalytic subunit  Symbol and/or name change 5135510 APPROVED