Spaca9 (sperm acrosome associated 9)

Gene: Spaca9 (sperm acrosome associated 9) Chinchilla lanigera

Analyze

Symbol:

Spaca9

Name:

sperm acrosome associated 9

RGD ID:

8879177

Description:

ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); genetic disease (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal microtubule (ortholog); ciliary basal body (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chromosome unknown open reading frame, human C9orf9; LOC102028322; uncharacterized protein C9orf9 homolog

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	2,185,754 - 2,196,323 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	2,184,878 - 2,196,367 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

developmental and epileptic encephalopathy 14 (ISO)

Ehlers-Danlos syndrome classic type 1 (ISO)

genetic disease (ISO)

Leigh disease (ISO)

primary coenzyme Q10 deficiency 7 (ISO)

Rafiq syndrome (ISO)

tuberous sclerosis 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axoneme assembly (ISO)

Cellular Component

acrosomal vesicle (ISO)

axonemal microtubule (ISO)

ciliary basal body (ISO)

ciliary base (ISO)

cytoplasm (ISO)

cytoplasmic microtubule (ISO)

nucleus (ISO)

sperm flagellum (ISO)

Molecular Function

calcium-dependent protein binding (ISO)

microtubule binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Spaca9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	2,185,754 - 2,196,323 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	2,184,878 - 2,196,367 (+)	NCBI	ChiLan1.0	ChiLan1.0

SPACA9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	132,878,344 - 132,890,314 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	132,878,027 - 132,890,201 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	135,753,731 - 135,765,588 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	134,744,111 - 134,755,239 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	132,783,843 - 132,794,972	NCBI
Celera	9	106,296,025 - 106,307,156 (+)	NCBI		Celera
Cytogenetic Map	9	q34.13	NCBI
HuRef	9	105,248,210 - 105,259,341 (+)	NCBI		HuRef
CHM1_1	9	135,904,767 - 135,915,896 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	145,090,157 - 145,104,158 (+)	NCBI		T2T-CHM13v2.0

Spaca9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	28,582,092 - 28,589,663 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	28,582,092 - 28,589,739 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	28,692,080 - 28,699,651 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	28,692,080 - 28,699,727 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	28,547,600 - 28,555,171 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	28,514,089 - 28,521,660 (-)	NCBI		MGSCv36	mm8
Celera	2	28,396,586 - 28,404,157 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	19.38	NCBI

Spaca9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	32,417,350 - 32,426,776 (-)	NCBI		GRCr8
mRatBN7.2	3	12,019,376 - 12,028,801 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	12,019,363 - 12,029,119 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	15,091,781 - 15,100,694 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	23,676,739 - 23,685,652 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	21,931,188 - 21,940,109 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	7,269,851 - 7,279,253 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	7,269,853 - 7,278,758 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	12,620,541 - 12,630,046 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	7,677,850 - 7,686,755 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	7,678,149 - 7,687,055 (-)	NCBI
Celera	3	6,800,098 - 6,809,003 (-)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

SPACA9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	6,469,929 - 6,481,751 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	6,472,265 - 6,484,079 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	103,994,592 - 104,006,390 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	132,624,823 - 132,636,687 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	132,625,393 - 132,636,686 (+)	Ensembl	panpan1.1		panPan2

SPACA9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	51,460,359 - 51,470,612 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	51,460,623 - 51,468,902 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	50,725,624 - 50,735,580 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	52,355,800 - 52,365,756 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	52,355,801 - 52,364,080 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	51,134,188 - 51,144,133 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	51,458,670 - 51,468,614 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	51,538,193 - 51,548,137 (-)	NCBI		UU_Cfam_GSD_1.0

Spaca9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	199,553,674 - 199,561,717 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	19,322,201 - 19,330,245 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	19,322,207 - 19,331,434 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPACA9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	272,625,712 - 272,636,346 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	272,625,701 - 272,635,406 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	306,779,769 - 306,792,021 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPACA9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	5,250,367 - 5,263,194 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	5,250,063 - 5,263,186 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666079	10,382,593 - 10,395,466 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spaca9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	3,537,550 - 3,545,456 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	3,537,547 - 3,546,027 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005408384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005408389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01066870	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01222876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000020030 ⟹ ENSCLAP00000019837

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955513	2,185,754 - 2,196,323 (+)	Ensembl

RefSeq Acc Id:

XM_005408384 ⟹ XP_005408441

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,185,744 - 2,196,367 (+)	NCBI

Sequence:

show sequence

CCGGGACAGACGGGCCCAAACTCGGGGGTGGGGCAGGGCGGCCACGTGACCTGGTTGCTATGGA
ACCGCGGTCACAATCAAACCCAACGCCCCCCTCCGCGGCGGCCCCACCCCACCCCTGCTGCCCC
TAGTCCTGCGGAGGGCCTCCCCCTCCCTCCCGCACACCCACGGAGTCACGCGGGCTGCAGGTGC
GCAGGGAGCACAGGCCGCTGCAGGACGAGCAAGGATCCCTCGTGTCCCTCGGGTGACCACACAC
CATGTCGATGTCAATGAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAGTACAAGCTC
TTCCAGCAGCAGCAGTTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACGCCCACGACA
AGATCCGGCCCATCTCCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTGCTACAACTC
CACAGACCGGCGGATCCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAGCTCTGTCAG
CACTTCGAGGCCGTGCACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAATGCAAAACCC
TGGTTAGCCAAAGCAGTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGTGGTGAACCA
CCTCAGCTGTGACGAGGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCCCTCGTCCTG
GACGCAATGAAAGAATGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGCAGCATGACA
TCCAAGTTCACGGGACAGCAACCACACAGGAAGGTCCCTCACAGACAGTGGAGGAGCTGCTGCA
GACGAGCATGCAACCATCCCCAGAAAGGGGCTAAGGGGGTCCCGCCGCAGGGCCAGGGCCAGCC
TGCAGACCTTTCCCCAGGGGTGGAAAGTAGGTGAGAGGTCTGTTCGGACAATAAAACCCCAAAT
TTTCAGACAA

hide sequence

RefSeq Acc Id:

XM_005408385 ⟹ XP_005408442

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,185,526 - 2,196,367 (+)	NCBI

Sequence:

show sequence

CCCGCGCCTGGGCGTGTCATCCCCTCCCTGTCCCAACTGCGCCCCTCAAGCGGGAACCCTTTCC
AGCTCATCTGGTCGCTCCTGGCTGGGCCTCCAGGATCAGAGGGGCCACTTGGACAGAGGTTCCC
GATGACACTACTTCCGGGGCCTCAGTTTTCCCAACTTTCAAATCCCTCGTGTCCCTCGGGTGAC
CACACACCATGTCGATGTCAATGAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAGTA
CAAGCTCTTCCAGCAGCAGCAGTTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACGCC
CACGACAAGATCCGGCCCATCTCCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTGCT
ACAACTCCACAGACCGGCGGATCCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAGCT
CTGTCAGCACTTCGAGGCCGTGCACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAATGC
AAAACCCTGGTTAGCCAAAGCAGTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGTGG
TGAACCACCTCAGCTGTGACGAGGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCCCT
CGTCCTGGACGCAATGAAAGAATGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGCAG
CATGACATCCAAGTTCACGGGACAGCAACCACACAGGAAGGTCCCTCACAGACAGTGGAGGAGC
TGCTGCAGACGAGCATGCAACCATCCCCAGAAAGGGGCTAAGGGGGTCCCGCCGCAGGGCCAGG
GCCAGCCTGCAGACCTTTCCCCAGGGGTGGAAAGTAGGTGAGAGGTCTGTTCGGACAATAAAAC
CCCAAATTTTCAGACAA

hide sequence

RefSeq Acc Id:

XM_005408386 ⟹ XP_005408443

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,187,287 - 2,196,367 (+)	NCBI

Sequence:

show sequence

ACTGGAAAGTCAGGCAGGCTCAGTGCAAGGTCCAGGCTTGCCCGCCTCCTAGCTACTTGGTTTC
ACCGTGCTGATCTTTCAAGGCTGTGGCGAGGAGTGGAGATCCCTCGTGTCCCTCGGGTGACCAC
ACACCATGTCGATGTCAATGAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAGTACAA
GCTCTTCCAGCAGCAGCAGTTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACGCCCAC
GACAAGATCCGGCCCATCTCCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTGCTACA
ACTCCACAGACCGGCGGATCCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAGCTCTG
TCAGCACTTCGAGGCCGTGCACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAATGCAAA
ACCCTGGTTAGCCAAAGCAGTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGTGGTGA
ACCACCTCAGCTGTGACGAGGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCCCTCGT
CCTGGACGCAATGAAAGAATGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGCAGCAT
GACATCCAAGTTCACGGGACAGCAACCACACAGGAAGGTCCCTCACAGACAGTGGAGGAGCTGC
TGCAGACGAGCATGCAACCATCCCCAGAAAGGGGCTAAGGGGGTCCCGCCGCAGGGCCAGGGCC
AGCCTGCAGACCTTTCCCCAGGGGTGGAAAGTAGGTGAGAGGTCTGTTCGGACAATAAAACCCC
AAATTTTCAGACAA

hide sequence

RefSeq Acc Id:

XM_005408387 ⟹ XP_005408444

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,186,531 - 2,196,367 (+)	NCBI

Sequence:

show sequence

CCTCGTGGGCACGTCAGACTCCACTGCAAAGGCAGGCGGGAAGAAAAGGAAGCTGACTCCCCTG
AACAAAGAACGCAACAACCAAGCCTGCAGTTTGCACCGGAGAGATCCCTCGTGTCCCTCGGGTG
ACCACACACCATGTCGATGTCAATGAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAG
TACAAGCTCTTCCAGCAGCAGCAGTTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACG
CCCACGACAAGATCCGGCCCATCTCCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTG
CTACAACTCCACAGACCGGCGGATCCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAG
CTCTGTCAGCACTTCGAGGCCGTGCACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAAT
GCAAAACCCTGGTTAGCCAAAGCAGTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGT
GGTGAACCACCTCAGCTGTGACGAGGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCC
CTCGTCCTGGACGCAATGAAAGAATGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGC
AGCATGACATCCAAGTTCACGGGACAGCAACCACACAGGAAGGTCCCTCACAGACAGTGGAGGA
GCTGCTGCAGACGAGCATGCAACCATCCCCAGAAAGGGGCTAAGGGGGTCCCGCCGCAGGGCCA
GGGCCAGCCTGCAGACCTTTCCCCAGGGGTGGAAAGTAGGTGAGAGGTCTGTTCGGACAATAAA
ACCCCAAATTTTCAGACAA

hide sequence

RefSeq Acc Id:

XM_005408388 ⟹ XP_005408445

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,184,878 - 2,196,367 (+)	NCBI

Sequence:

show sequence

TTGCTCCCGCTCAGAACTTGAGCGGCGCAGAGAGCACTTCCAGCCCACTTCATGAAAGCCTCAC
CCTCCCGCGGCTGCAGGAGATCCCTCGTGTCCCTCGGGTGACCACACACCATGTCGATGTCAAT
GAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAG
TTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCATCT
CCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTGCTACAACTCCACAGACCGGCGGAT
CCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAGCTCTGTCAGCACTTCGAGGCCGTG
CACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAATGCAAAACCCTGGTTAGCCAAAGCA
GTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGTGGTGAACCACCTCAGCTGTGACGA
GGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCCCTCGTCCTGGACGCAATGAAAGAA
TGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGCAGCATGACATCCAAGTTCACGGGA
CAGCAACCACACAGGAAGGTCCCTCACAGACAGTGGAGGAGCTGCTGCAGACGAGCATGCAACC
ATCCCCAGAAAGGGGCTAAGGGGGTCCCGCCGCAGGGCCAGGGCCAGCCTGCAGACCTTTCCCC
AGGGGTGGAAAGTAGGTGAGAGGTCTGTTCGGACAATAAAACCCCAAATTTTCAGACAA

hide sequence

RefSeq Acc Id:

XM_005408389 ⟹ XP_005408446

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955513	2,185,754 - 2,196,101 (+)	NCBI

Sequence:

show sequence

CGGGCCCAAACTCGGGGGTGGGGCAGGGCGGCCACGTGACCTGGTTGCTATGGAACCGCGGTCA
CAATCAAACCCAACGCCCCCCTCCGCGGCGGCCCCACCCCACCCCTGCTGCCCCTAGTCCTGCG
GAGGGCCTCCCCCTCCCTCCCGCACACCCACGGAGTCACGCGGGCTGCAGGTGCGCAGGGAGCA
CAGGCCGCTGCAGGACGAGCAAGGATCCCTCGTGTCCCTCGGGTGACCACACACCATGTCGATG
TCAATGAATGAAGTCAAAGAGTCCCTCCGGGGTGTGGAGCAGAAGTACAAGCTCTTCCAGCAGC
AGCAGTTCACCTTCATCGCAGCCCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCC
CATCTCCACCATTGGACAGGTGCAGAGCTACATGGAACATCACTGCTACAACTCCACAGACCGG
CGGATCCTGCTCATGTTCCTGGACATCTGTTCAGATCTGAACAAGCTCTGTCAGCACTTCGAGG
CCGTGCACTCTGGCACCCCGGTCACCAACAACCTCCTCGAGAAATGCAAAACCCTGGTTAGCCA
AAGCAGTGACTTGAGCAGCCTGAGAGCAAAGTACCCTCATGATGTGGTGAACCACCTCAGCTGT
GACGAGGCCAAGAACCACTACGGAGGTGTGGTCAGCCTCATCCCCCTCGTCCTGGACGCAATGA
AAGAATGGATCGCCCACTCGGAGAAACTGCCCCGCAAGGCGCTGCAGCATGGGACGACTTAGCT
TCTGTATTGTTGCTTCCTCGGGGGGAGACATACAAGAATAAAGTGTTCTAACGCC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005408441	(Get FASTA)	NCBI Sequence Viewer
	XP_005408442	(Get FASTA)	NCBI Sequence Viewer
	XP_005408443	(Get FASTA)	NCBI Sequence Viewer
	XP_005408444	(Get FASTA)	NCBI Sequence Viewer
	XP_005408445	(Get FASTA)	NCBI Sequence Viewer
	XP_005408446	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000019837
	ENSCLAP00000019837.1

RefSeq Acc Id:	XP_005408445 ⟸ XM_005408388
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHDIQVHGTATTQEGPSQTVEELLQ TSMQPSPERG hide sequence

RefSeq Acc Id:	XP_005408442 ⟸ XM_005408385
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHDIQVHGTATTQEGPSQTVEELLQ TSMQPSPERG hide sequence

RefSeq Acc Id:	XP_005408441 ⟸ XM_005408384
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHDIQVHGTATTQEGPSQTVEELLQ TSMQPSPERG hide sequence

RefSeq Acc Id:	XP_005408446 ⟸ XM_005408389
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHGTT hide sequence

RefSeq Acc Id:	XP_005408444 ⟸ XM_005408387
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHDIQVHGTATTQEGPSQTVEELLQ TSMQPSPERG hide sequence

RefSeq Acc Id:	XP_005408443 ⟸ XM_005408386
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VXD1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSMSMNEVKESLRGVEQKYKLFQQQQFTFIAALEHCRENAHDKIRPISTIGQVQSYMEHHCYNS TDRRILLMFLDICSDLNKLCQHFEAVHSGTPVTNNLLEKCKTLVSQSSDLSSLRAKYPHDVVNH LSCDEAKNHYGGVVSLIPLVLDAMKEWIAHSEKLPRKALQHDIQVHGTATTQEGPSQTVEELLQ TSMQPSPERG hide sequence

RefSeq Acc Id:

ENSCLAP00000019837 ⟸ ENSCLAT00000020030

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000013602	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000020030	ENTREZGENE
	ENSCLAT00000020030.1	UniProtKB/TrEMBL
InterPro	SPACA9	UniProtKB/TrEMBL
NCBI Gene	LOC102028322	ENTREZGENE
PANTHER	PTHR32455	UniProtKB/TrEMBL
	SPERM ACROSOME-ASSOCIATED PROTEIN 9	UniProtKB/TrEMBL
Pfam	SPACA9	UniProtKB/TrEMBL
UniProt	A0A8C2VXD1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Spaca9	sperm acrosome associated 9	LOC102028322	chromosome unknown open reading frame, human C9orf9	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar