Triap1 (TP53 regulated inhibitor of apoptosis 1)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| FTP Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Triap1 (TP53 regulated inhibitor of apoptosis 1) Chinchilla lanigera

Analyze

Symbol:

Triap1

Name:

TP53 regulated inhibitor of apoptosis 1

RGD ID:

8877944

Description:

ENCODES a protein that exhibits p53 binding (ortholog); phosphatidic acid transfer activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

TP53-regulated inhibitor of apoptosis 1

RGD Orthologs

Human

Mouse

Rat

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	11,195,399 - 11,198,402 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	11,195,399 - 11,198,402 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to UV (ISO)

DNA damage response, signal transduction by p53 class mediator (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (ISO)

negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ISO)

negative regulation of release of cytochrome c from mitochondria (ISO)

phospholipid transport (ISO)

positive regulation of phospholipid transport (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of membrane lipid distribution (ISO)

Cellular Component

mitochondrial intermembrane space (ISO)

mitochondrion (ISO)

nucleoplasm (ISO)

protein-containing complex (ISO)

Molecular Function

p53 binding (ISO)

phosphatidic acid transfer activity (ISO)

protein binding (ISO)

References

References - curated


1.	Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data

Triap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	11,195,399 - 11,198,402 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	11,195,399 - 11,198,402 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRIAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	12	120,443,964 - 120,446,384 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	12	120,443,964 - 120,446,384 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	12	120,881,764 - 120,884,215 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	12	120,881,767 - 120,884,187 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	119,366,147 - 119,368,598 (-)	NCBI	NCBI36		hg18	NCBI36
Celera	12	120,516,476 - 120,518,927 (-)	NCBI
Cytogenetic Map	12	q24.31	NCBI
HuRef	12	117,890,554 - 117,893,005 (-)	NCBI		HuRef
CHM1_1	12	120,850,255 - 120,852,706 (-)	NCBI		CHM1_1

Triap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	115,479,290 - 115,481,612 (+)	NCBI	GRCm39		mm39
GRCm38	5	115,341,231 - 115,343,553 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	115,341,225 - 115,343,569 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	115,791,256 - 115,793,561 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	5	115,602,246 - 115,604,551 (+)	NCBI			mm8
Celera	5	112,438,503 - 112,440,806 (+)	NCBI		Celera
Cytogenetic Map	5	F	NCBI

Triap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	41,267,534 - 41,270,053 (-)	NCBI
Rnor_6.0 Ensembl	12	47,029,861 - 47,031,498 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	12	46,987,404 - 46,989,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	12	46,987,404 - 46,989,906 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	12	48,822,355 - 48,824,864 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	42,535,655 - 42,538,148 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	12	42,888,498 - 42,890,991 (-)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

TRIAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	12	121,400,063 - 121,402,506 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	121,400,063 - 121,402,506 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	12	118,025,599 - 118,028,045 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

TRIAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	26	16,351,044 - 16,352,773 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	26	16,349,513 - 16,352,805 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Triap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936668	500,815 - 503,158 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	40,411,957 - 40,415,500 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TRIAP1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	115,798,472 - 115,800,906 (-)	NCBI
ChlSab1.1 Ensembl	11	115,798,862 - 115,800,840 (-)	Ensembl

Triap1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624747	13,220,377 - 13,223,502 (+)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005396508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01045986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCQ01036220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCLAT00000016610 ⟹ ENSCLAP00000016446

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955455	11,195,399 - 11,198,402 (+)	Ensembl

RefSeq Acc Id:

XM_005396508 ⟹ XP_005396565

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955455	11,195,399 - 11,198,402 (+)	NCBI

Sequence:

show sequence

GTGATGACATCATAGTGCGCCTCTGTAGCTCAGCCACCGCCATGAACAGCGTAGGAGAGGCTTG
CACGGATATGAAGCGCGAGTACGATCAGTGCTTCAATCGCTGGTTTGCCGAGAAGTTTCTCAAG
GGGGACGGTTCCGGGGACCCGTGCACTGATCTCTTCAAGCGCTACCAGCAGTGTGTTCAGAAAG
CAATAAAGGAGAAAGAGATTCCTATTGAAGGACTGGAGTTCATGGGCCATGGCAAAGAAAAGCC
TGAAAATTCTTCTTGACCTTGAAAATGGATTTCTCATCAGGAAATTGAGGACTCTGGATTTTGT
CAACTAAGACCCTGAAAACAGCCATGGGATTGATGAGTTTAGGAGGGAGGAGTTTTATTTCTTC
CTTCTTGAAGTTTTCCTCACTTGTAAATGATGAACTATCATTGCTTTAGATGATTTCTCACTTG
TTCTGGCATCTTGCAGGAATTCAGTGTGCTAAAATTGAACGATTTCTCTCGAGATGATGATTGC
AATACAGAGTCTGGAATTAGCTTTAAATATATCTTGTATGTAAATAATGATAAGCTAATCAAGA
TGGTCAGGGTTGCCTGAAGTCTTGATTTTGCTGCAAAAAGACATTACACTGTACTGGGGTCATT
GTGAAAGCGTTTGGGTAGGACCTCTTTTTCTCTCTCAGGGAGTAAATACTCTAAAAAGGGATCT
GGGCACAACACTTTCAATCAATGCTTGGGAGCACAGTTTTATTTTTATATGGTAACTAACAGTT
TGCGGGTGACCTGGGTTAGACAAAGAGAAAGACAGCTTTTAACACTTTCTGTCTCCAGGTGTCT
AATTAAGACATGAAAGCTTCAAGAATGTTGACGTAAACACCATTTCAGAGCTCACGGTGTAGTT
GAGGAATCAGAGTATTTGCAGTGCCTATGGAAGAACCACCTATTAGAGATTTGGTGTTGCCAGC
TTTCAACCTAAGTTAATGAATTAAGTCAACCTGCCTGTCGTAAAGCCAAAATGCTGCATCTGGT
TAAATGGAGGGGAAAGGTGCTTGCTTTACTTGCCTTGTTTGCCCACCCTATAAGGTCTATAATC
ATGAAGATGGAATAAACGCTTTTAGTTTTCAATCATTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005396565	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_005396565 ⟸ XM_005396508
- Sequence:	show sequence MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEIPIEGLEF MGHGKEKPENSS hide sequence

RefSeq Acc Id:

ENSCLAP00000016446 ⟸ ENSCLAT00000016610

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000011307	Ensembl, ENTREZGENE
Ensembl Protein	ENSCLAP00000016446	ENTREZGENE
Ensembl Transcript	ENSCLAT00000016610	ENTREZGENE
NCBI Gene	Triap1	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)