Krit1 (KRIT1 ankyrin repeat containing) - Rat Genome Database

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Gene: Krit1 (KRIT1 ankyrin repeat containing) Chinchilla lanigera
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Symbol: Krit1
Name: KRIT1 ankyrin repeat containing
RGD ID: 8875157
Description: ENCODES a protein that exhibits microtubule binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Angiokeratoma Corporis Diffusum with Arteriovenous Fistulas (ortholog); cavernous hemangioma (ortholog); Cavernous Malformations of CNS and Retina (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: krev interaction trapped protein 1; KRIT1, ankyrin repeat containing
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554329,168,678 - 9,219,947 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Krit1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554329,168,678 - 9,219,947 (-)NCBIChiLan1.0ChiLan1.0
KRIT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl792,131,774 - 92,245,924 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl792,198,969 - 92,246,166 (-)EnsemblGRCh38hg38GRCh38
GRCh38792,198,969 - 92,246,100 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37791,828,283 - 91,875,414 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36791,666,219 - 91,713,350 (-)NCBINCBI36hg18NCBI36
Build 34791,472,933 - 91,520,065NCBI
Celera786,532,835 - 86,579,965 (-)NCBI
Cytogenetic Map7q21.2NCBI
HuRef786,435,945 - 86,483,492 (-)NCBIHuRef
CHM1_1791,758,320 - 91,805,450 (-)NCBICHM1_1
CRA_TCAGchr7v2791,157,516 - 91,204,647 (-)NCBI
Krit1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3953,853,156 - 3,894,515 (+)NCBIGRCm39mm39
GRCm39 Ensembl53,853,184 - 3,895,564 (+)Ensembl
GRCm3853,803,156 - 3,844,515 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl53,803,184 - 3,845,564 (+)EnsemblGRCm38mm10GRCm38
MGSCv3753,803,165 - 3,844,515 (+)NCBIGRCm37mm9NCBIm37
MGSCv3653,809,195 - 3,847,365 (+)NCBImm8
Celera53,739,452 - 3,780,804 (+)NCBICelera
Cytogenetic Map5A1NCBI
cM Map52.26NCBI
Krit1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2430,299,203 - 30,333,366 (-)NCBI
Rnor_6.0 Ensembl427,438,609 - 27,473,150 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0427,438,609 - 27,473,150 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0427,341,835 - 27,376,376 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4427,014,488 - 27,048,636 (-)NCBIRGSC3.4rn4RGSC3.4
Celera425,724,169 - 25,758,310 (-)NCBICelera
Cytogenetic Map4q13NCBI
KRIT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1797,794,527 - 97,841,099 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl797,794,531 - 97,840,895 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0784,197,200 - 84,244,050 (-)NCBIMhudiblu_PPA_v0panPan3
KRIT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11417,836,513 - 17,872,514 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1417,832,625 - 17,872,190 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1417,398,065 - 17,433,896 (-)NCBI
ROS_Cfam_1.01417,643,248 - 17,679,106 (-)NCBI
UMICH_Zoey_3.11417,803,905 - 17,839,882 (-)NCBI
UNSW_CanFamBas_1.01417,516,013 - 17,552,078 (-)NCBI
UU_Cfam_GSD_1.01417,789,641 - 17,825,471 (-)NCBI
Krit1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511831,240,278 - 31,280,063 (-)NCBI
SpeTri2.0NW_0049366212,088,606 - 2,128,579 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KRIT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1972,143,652 - 72,184,774 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2978,874,130 - 78,913,770 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KRIT1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12156,770,694 - 56,816,409 (+)NCBI
Vero_WHO_p1.0NW_02366604247,456,063 - 47,502,978 (-)NCBI
Krit1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624809978,391 - 1,036,313 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005388010   ⟹   XP_005388067
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,168,678 - 9,219,947 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005388011   ⟹   XP_005388068
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,172,132 - 9,219,946 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005388067 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388068 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005388067   ⟸   XM_005388010
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005388068   ⟸   XM_005388011
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008236 ENTREZGENE
Ensembl Protein ENSCLAP00000011931 ENTREZGENE
Ensembl Transcript ENSCLAT00000012072 ENTREZGENE
NCBI Gene Krit1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-01-29 Krit1  KRIT1 ankyrin repeat containing    KRIT1, ankyrin repeat containing  Symbol and/or name change 5135510 APPROVED