Snap29 (synaptosome associated protein 29) - Rat Genome Database
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Gene: Snap29 (synaptosome associated protein 29) Chinchilla lanigera
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Symbol: Snap29
Name: synaptosome associated protein 29
RGD ID: 8870052
Description: INVOLVED IN autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); CEDNIK syndrome (ortholog); DiGeorge syndrome (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); ciliary pocket membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: synaptosomal-associated protein 29; synaptosomal-associated protein, 29kDa
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544219,419,821 - 19,446,665 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544219,419,381 - 19,446,782 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Snap29
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544219,419,821 - 19,446,665 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544219,419,381 - 19,446,782 (-)NCBIChiLan1.0ChiLan1.0
SNAP29
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2220,859,007 - 20,891,214 (+)EnsemblGRCh38hg38GRCh38
GRCh382220,859,007 - 20,891,214 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372221,213,295 - 21,245,502 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh372221,213,292 - 21,245,502 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362219,543,292 - 19,574,109 (+)NCBINCBI36hg18NCBI36
Build 342219,537,845 - 19,568,663NCBI
Celera224,704,631 - 4,736,842 (+)NCBI
Cytogenetic Map22q11.21NCBI
HuRef224,481,433 - 4,513,635 (+)NCBIHuRef
CHM1_12221,213,478 - 21,245,708 (+)NCBICHM1_1
Snap29
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391617,223,864 - 17,248,690 (+)NCBIGRCm39mm39
GRCm381617,406,000 - 17,430,826 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1617,405,986 - 17,430,827 (+)EnsemblGRCm38mm10GRCm38
MGSCv371617,406,093 - 17,430,919 (+)NCBIGRCm37mm9NCBIm37
MGSCv361617,319,614 - 17,344,386 (+)NCBImm8
Celera1617,978,957 - 18,003,859 (+)NCBICelera
Cytogenetic Map16A3NCBI
Snap29
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21183,578,479 - 83,608,953 (-)NCBI
Rnor_6.0 Ensembl1187,827,651 - 87,858,107 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01187,827,633 - 87,858,107 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01190,883,352 - 90,914,051 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,579,141 - 85,609,842 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11185,619,738 - 85,650,439 (-)NCBI
Celera1182,342,398 - 82,372,753 (-)NCBICelera
Cytogenetic Map11q23NCBI
SNAP29
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12219,572,675 - 19,604,943 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2219,572,618 - 19,605,931 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0223,082,622 - 3,115,325 (+)NCBIMhudiblu_PPA_v0panPan3
SNAP29
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2630,609,158 - 30,630,262 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12630,606,195 - 30,630,441 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Snap29
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366192,377,284 - 2,402,049 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SNAP29
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1450,492,154 - 50,511,456 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11450,492,187 - 50,511,475 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21453,940,923 - 53,955,920 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SNAP29
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1194,797,690 - 4,827,573 (+)NCBI
ChlSab1.1 Ensembl194,797,725 - 4,830,251 (+)Ensembl
Snap29
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624945799,831 - 837,720 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023641   ⟹   ENSCLAP00000023420
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544219,419,821 - 19,446,665 (-)Ensembl
RefSeq Acc Id: XM_005391838   ⟹   XP_005391895
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544219,419,381 - 19,446,782 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005391895 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005391895   ⟸   XM_005391838
- Sequence:
RefSeq Acc Id: ENSCLAP00000023420   ⟸   ENSCLAT00000023641


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016060 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023420 ENTREZGENE
Ensembl Transcript ENSCLAT00000023641 ENTREZGENE
NCBI Gene Snap29 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Snap29  synaptosome associated protein 29    synaptosomal-associated protein, 29kDa  Symbol and/or name change 5135510 APPROVED