Ccdc103 (coiled-coil domain containing 103)

Gene: Ccdc103 (coiled-coil domain containing 103) Chinchilla lanigera

Analyze

Symbol:

Ccdc103

Name:

coiled-coil domain containing 103

RGD ID:

8861009

Description:

ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); determination of digestive tract left/right asymmetry (ortholog); ASSOCIATED WITH genetic disease (ortholog); infertility (ortholog); Kartagener syndrome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coiled-coil domain-containing protein 103

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	17,690,368 - 17,693,285 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	17,690,148 - 17,693,285 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

infertility (ISO)

Kartagener syndrome (ISO)

primary ciliary dyskinesia (ISO)

primary ciliary dyskinesia 17 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonemal dynein complex assembly (ISO)

cilium movement (ISO)

determination of digestive tract left/right asymmetry (ISO)

heart looping (ISO)

inner dynein arm assembly (ISO)

outer dynein arm assembly (ISO)

Molecular Function

protein binding (ISO)

protein homodimerization activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Ccdc103
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	17,690,368 - 17,693,285 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	17,690,148 - 17,693,285 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC103
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	44,899,729 - 44,905,390 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	44,899,142 - 44,905,390 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	42,977,097 - 42,982,758 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	40,332,680 - 40,336,155 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	39,687,658 - 39,691,132 (+)	NCBI		Celera
Cytogenetic Map	17	q21.31	NCBI
HuRef	17	38,742,133 - 38,746,099 (+)	NCBI		HuRef
CHM1_1	17	43,213,221 - 43,217,188 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	45,753,613 - 45,759,276 (+)	NCBI		T2T-CHM13v2.0

Ccdc103
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	102,772,050 - 102,776,042 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	102,772,030 - 102,776,042 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	102,881,224 - 102,885,216 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	102,881,204 - 102,885,216 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	102,742,558 - 102,746,529 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	102,697,334 - 102,701,305 (+)	NCBI		MGSCv36	mm8
Celera	11	114,592,312 - 114,596,271 (+)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	66.48	NCBI

Ccdc103
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	88,346,453 - 88,349,853 (+)	NCBI		GRCr8
mRatBN7.2	10	87,846,327 - 87,849,959 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	87,846,357 - 87,849,757 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	92,882,443 - 92,885,843 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	92,348,853 - 92,352,253 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	87,742,199 - 87,745,599 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	90,984,213 - 90,987,829 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	90,984,227 - 90,987,823 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	90,756,508 - 90,760,217 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	92,053,347 - 92,056,747 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	86,548,834 - 86,552,235 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

CCDC103
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	19,927,506 - 19,933,456 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	21,895,520 - 21,902,006 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	12,416,623 - 12,423,251 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	12,591,698 - 12,595,664 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	12,589,984 - 12,595,664 (-)	Ensembl	panpan1.1		panPan2

CCDC103
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	18,581,544 - 18,585,939 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	18,582,468 - 18,584,612 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	17,966,986 - 17,971,383 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	19,254,988 - 19,259,385 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	19,255,912 - 19,258,056 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	18,132,606 - 18,137,003 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	18,311,621 - 18,316,018 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	18,468,471 - 18,472,881 (-)	NCBI		UU_Cfam_GSD_1.0

Ccdc103
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	17,931,275 - 17,935,052 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	1,261,044 - 1,262,858 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	1,259,422 - 1,263,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC103
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	12	18,469,705 - 18,474,316 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	18,714,420 - 18,719,058 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC103
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	61,502,337 - 61,505,872 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	61,502,495 - 61,505,668 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	32,251,265 - 32,254,863 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc103
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	404,068 - 406,979 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	404,102 - 407,025 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005394546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005394547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005394548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005394549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519375	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013519376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01043767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01124071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000024160 ⟹ ENSCLAP00000023932

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955451	17,690,368 - 17,693,285 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000024161 ⟹ ENSCLAP00000023933

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955451	17,691,497 - 17,692,724 (+)	Ensembl

RefSeq Acc Id:

XM_005394546 ⟹ XP_005394603

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,368 - 17,693,285 (+)	NCBI

Sequence:

show sequence

GCGGTTGCTAGGCAACCACAGCCGCTGGCGGTGGAATGAGCAGAGCTACCCTCTGGTCTTAACG
TATGGGGCGGGGCGGGGGAGATCCCCAAAGAAAAGGCTGGGGCTGCTGGAGTGAAGGCCTGGGG
GCTGCGTGAGGGGGACGGAAGTGTTGTTCTGTTTATTCGATGACTGGGAAGGGCCCGAAACTGG
ACAGGAGCCGAGACACCCGGGTCCAGTTGCTGGCCAGCCCTGCCGCCTTCTTGGCTTTTGACTT
CTTCAGCTGGGTTTCTGTCTGCAGAGCAGAAAGCTGGATTTCTGTAGCACTGCCCACGGCAGGT
GCCTGAGTGCTACGGGCTGGTTCTGTGCTCCGGCAGGCGGCCCGGAGGCCTCCTCTTGTCTGTG
ATGCTGAATCCCCATCAATGTGCACTCCCTTCGCCCGCCCAGGCATGCGCCATGGAGGAGAATA
GCATGGTCGACTTCAAAGCTTTGGAGAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTA
CAAGCGGGAGAACGCTGCCAAGTTCCGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTC
AGGGGTATCGTGCTCGCGTCACATCTGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGA
GAACTGCGCCCTGGAACTGTCACGCTACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGA
AGTCTCCGAGGAGGAGACGCCCTTCCAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGG
CGACGCTTGCGGAGTGGACCAGAGCGCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCG
GCCGCCTCTTCCAGACAGACGTGGGGTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAA
TCACATGAGGCCAGCCGACCGGGCAGCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGG
CGCTTCTCCCTGAACCTGAGCCTGCTGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCG
AGAAGCTGCAGGCCATGGGTGCCCCTGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCA
GCGGGGTGCAGAGCAGGAGCAGGACCTGCTGCAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGA
GGCGGGGGCCCAGGCGTCAGCGCAGCGTCTTTGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCC
TCAACTCAGAATCTTCAGAGCAAAAGCTGGAATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_005394547 ⟹ XP_005394604

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,368 - 17,693,285 (+)	NCBI

Sequence:

show sequence

GCGGTTGCTAGGCAACCACAGCCGCTGGCGGTGGAATGAGCAGAGCTACCCTCTGGTCTTAACG
TATGGGGCGGGGCGGGGGAGATCCCCAAAGAAAAGGCTGGGGCTGCTGGAGTGAAGGCCTGGGG
GCTGCGTGAGGGGGACGGAAGTGTTGTTCTGTTTATTCGATGACTGGGAAGGGCCCGAAACTGG
ACAGGAGCCGAGACACCCGGGTCCAGTTGCTGGCCAGCCCTGCCGCCTTCTTGGCTTTTGACTT
CTTCAGCTGGGAGCAGAAAGCTGGATTTCTGTAGCACTGCCCACGGCAGGTGCCTGAGTGCTAC
GGGCTGGTTCTGTGCTCCGGCAGGCGGCCCGGAGGCCTCCTCTTGTCTGTGATGCTGAATCCCC
ATCAATGTGCACTCCCTTCGCCCGCCCAGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTT
CAAAGCTTTGGAGAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAAC
GCTGCCAAGTTCCGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGC
TCGCGTCACATCTGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTG
GAACTGTCACGCTACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGAG
GAGACGCCCTTCCAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTGCGGA
GTGGACCAGAGCGCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCTTCCA
GACAGACGTGGGGTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAGGCCA
GCCGACCGGGCAGCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCCCTGA
ACCTGAGCCTGCTGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGCAGGC
CATGGGTGCCCCTGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGCAGAG
CAGGAGCAGGACCTGCTGCAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGAGGCGGGGGCCCAG
GCGTCAGCGCAGCGTCTTTGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCCTCAACTCAGAATC
TTCAGAGCAAAAGCTGGAATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_005394548 ⟹ XP_005394605

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,368 - 17,693,285 (+)	NCBI

Sequence:

show sequence

GCGGTTGCTAGGCAACCACAGCCGCTGGCGGTGGAATGAGCAGAGCTACCCTCTGGTCTTAACG
TATGGGGCGGGGCGGGGGAGATCCCCAAAGAAAAGGCTGGGGCTGCTGGAGTGAAGGCCTGGGG
GCTGCGTGAGGGGGACGGAAGTGTTGTTCTGTTTATTCGATGACTGGGAAGGGCCCGAAACTGG
ACAGGAGCCGAGACACCCGGGTCCAGTTGCTGGCCAGCCCTGCCGCCTTCTTGGCTTTTGACTT
CTTCAGCTGGGGCGGCCCGGAGGCCTCCTCTTGTCTGTGATGCTGAATCCCCATCAATGTGCAC
TCCCTTCGCCCGCCCAGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTTCAAAGCTTTGGA
GAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAACGCTGCCAAGTTC
CGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGCTCGCGTCACATC
TGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTGGAACTGTCACGC
TACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGAGGAGACGCCCTTC
CAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTGCGGAGTGGACCAGAGC
GCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCTTCCAGACAGACGTGGG
GTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAGGCCAGCCGACCGGGCA
GCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCCCTGAACCTGAGCCTGC
TGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGCAGGCCATGGGTGCCCC
TGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGCAGAGCAGGAGCAGGAC
CTGCTGCAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGAGGCGGGGGCCCAGGCGTCAGCGCAG
CGTCTTTGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCCTCAACTCAGAATCTTCAGAGCAAAA
GCTGGAATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_005394549 ⟹ XP_005394606

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,368 - 17,693,285 (+)	NCBI

Sequence:

show sequence

GCGGTTGCTAGGCAACCACAGCCGCTGGCGGTGGAATGAGCAGAGCTACCCTCTGGTCTTAACG
TATGGGGCGGGGCGGGGGAGATCCCCAAAGAAAAGGCTGGGGCTGCTGGAGTGAAGGCCTGGGG
GCTGCGTGAGGGGGACGGAAGTGTTGTTCTGTTTATTCGATGACTGGGAAGGGCCCGAAACTGG
ACAGGAGCCGAGACACCCGGGTCCAGTTGCTGGCCAGCCCTGCCGCCTTCTTGGCTTTTGACTT
CTTCAGCTGGGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTTCAAAGCTTTGGAGAAAGA
GCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAACGCTGCCAAGTTCCGGGCT
GTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGCTCGCGTCACATCTGAAGC
CACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTGGAACTGTCACGCTACTCG
GAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGAGGAGACGCCCTTCCAGCCT
GGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTGCGGAGTGGACCAGAGCGCTACC
AGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCTTCCAGACAGACGTGGGGTTTGG
ACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAGGCCAGCCGACCGGGCAGCGGTG
CTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCCCTGAACCTGAGCCTGCTGAGCC
CCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGCAGGCCATGGGTGCCCCTGGGGC
CGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGCAGAGCAGGAGCAGGACCTGCTG
CAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGAGGCGGGGGCCCAGGCGTCAGCGCAGCGTCTT
TGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCCTCAACTCAGAATCTTCAGAGCAAAAGCTGGA
ATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_013519374 ⟹ XP_013374828

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,148 - 17,693,285 (+)	NCBI

Sequence:

show sequence

GTCAGGAAGGACCCCGCTGCCGCCCAGCCCCTGCCTGAAGACCGGCTCCGAAGATTGCTGGTCG
CGGAGACAGGGACTGAAAGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTTCAAAGCTTTG
GAGAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAACGCTGCCAAGT
TCCGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGCTCGCGTCACA
TCTGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTGGAACTGTCAC
GCTACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGAGGAGACGCCCT
TCCAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTGCGGAGTGGACCAGA
GCGCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCTTCCAGACAGACGTG
GGGTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAGGCCAGCCGACCGGG
CAGCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCCCTGAACCTGAGCCT
GCTGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGCAGGCCATGGGTGCC
CCTGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGCAGAGCAGGAGCAGG
ACCTGCTGCAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGAGGCGGGGGCCCAGGCGTCAGCGC
AGCGTCTTTGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCCTCAACTCAGAATCTTCAGAGCAA
AAGCTGGAATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_013519375 ⟹ XP_013374829

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,203 - 17,693,285 (+)	NCBI

Sequence:

show sequence

TGCTGGTCGCGGAGACAGGGACTGAAAGGTGGCGTTGTGGGTCCCCAAACGAAGGCGTGGGACG
CGTCAAAGAAAGTTGTACCGGAGGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTTCAAAG
CTTTGGAGAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAACGCTGC
CAAGTTCCGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGCTCGCG
TCACATCTGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTGGAACT
GTCACGCTACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGAGGAGAC
GCCCTTCCAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTGCGGAGTGGA
CCAGAGCGCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCTTCCAGACAG
ACGTGGGGTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAGGCCAGCCGA
CCGGGCAGCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCCCTGAACCTG
AGCCTGCTGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGCAGGCCATGG
GTGCCCCTGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGCAGAGCAGGA
GCAGGACCTGCTGCAGGAGCTGCGGGAGCTGTACCAGCTCCGCTGAGGCGGGGGCCCAGGCGTC
AGCGCAGCGTCTTTGGTGTGGCTTGGGTTTCTGCCCACTTCCCTCCTCAACTCAGAATCTTCAG
AGCAAAAGCTGGAATTGAGTCTTGCCACCTCTTA

hide sequence

RefSeq Acc Id:

XM_013519376 ⟹ XP_013374830

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955451	17,690,368 - 17,693,116 (+)	NCBI

Sequence:

show sequence

GCGGTTGCTAGGCAACCACAGCCGCTGGCGGTGGAATGAGCAGAGCTACCCTCTGGTCTTAACG
TATGGGGCGGGGCGGGGGAGATCCCCAAAGAAAAGGCTGGGGCTGCTGGAGTGAAGGCCTGGGG
GCTGCGTGAGGGGGACGGAAGTGTTGTTCTGTTTATTCGATGACTGGGAAGGGCCCGAAACTGG
ACAGGAGCCGAGACACCCGGGTCCAGTTGCTGGCCAGCCCTGCCGCCTTCTTGGCTTTTGACTT
CTTCAGCTGGGAGCAGAAAGCTGGATTTCTGTAGCACTGCCCACGGCAGGTGCCTGAGTGCTAC
GGGCTGGTTCTGTGCTCCGGCAGGCGGCCCGGAGGCCTCCTCTTGTCTGTGATGCTGAATCCCC
ATCAATGTGCACTCCCTTCGCCCGCCCAGGCATGCGCCATGGAGGAGAATAGCATGGTCGACTT
CAAAGCTTTGGAGAAAGAGCTGCAGGCAGCACTTGCTGCTGATGAGAAGTACAAGCGGGAGAAC
GCTGCCAAGTTCCGGGCTGTGGCACAGAGGGTGCCGTCCTACGAAGACTTCAGGGGTATCGTGC
TCGCGTCACATCTGAAGCCACTGGAGCGGAAGGACAAGATGAGTGGAAAGAGAACTGCGCCCTG
GAACTGTCACGCTACTCGGAGGAAGACCTTCCAGGAGGACGTGGCCGTGGAAGTCTCCGAGGCA
GGAGGAGACGCCCTTCCAGCCTGGGACCTCAGCAGAGTTCTACCGCGACTGGCGGCGACGCTTG
CGGAGTGGACCAGAGCGCTACCAGGCTCTGCTGCGGCTCGGGGGTCCCACGCTCGGCCGCCTCT
TCCAGACAGACGTGGGGTTTGGACTCCTCGGGGAGCTGCTGGCGACCCTGGCCAATCACATGAG
GCCAGCCGACCGGGCAGCGGTGCTGGGCATCCTTCGAGGCCTGGCGGGCACTGGGCGCTTCTCC
CTGAACCTGAGCCTGCTGAGCCCCTCGGAGCTTGAGTGCTGCCGGGCCCTGTTCGAGAAGCTGC
AGGCCATGGGTGCCCCTGGGGCCGGGGCTGGGCAGGAGGCGCTCAGTGGGGAGCAGCGGGGTGC
AG

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Protein Sequences


Protein RefSeqs	XP_005394603	(Get FASTA)	NCBI Sequence Viewer
	XP_005394604	(Get FASTA)	NCBI Sequence Viewer
	XP_005394605	(Get FASTA)	NCBI Sequence Viewer
	XP_005394606	(Get FASTA)	NCBI Sequence Viewer
	XP_013374828	(Get FASTA)	NCBI Sequence Viewer
	XP_013374829	(Get FASTA)	NCBI Sequence Viewer
	XP_013374830	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000023932
	ENSCLAP00000023932.1
	ENSCLAP00000023933.1

RefSeq Acc Id:

XP_005394603 ⟸ XM_005394546

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLNPHQCALPSPAQACAMEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDF
RGIVLASHLKPLERKDKMSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWR
RRLRSGPERYQALLRLGGPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTG
RFSLNLSLLSPSELECCRALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR

hide sequence

RefSeq Acc Id:

XP_005394604 ⟸ XM_005394547

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLNPHQCALPSPAQACAMEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDF
RGIVLASHLKPLERKDKMSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWR
RRLRSGPERYQALLRLGGPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTG
RFSLNLSLLSPSELECCRALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR

hide sequence

RefSeq Acc Id:

XP_005394605 ⟸ XM_005394548

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLNPHQCALPSPAQACAMEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDF
RGIVLASHLKPLERKDKMSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWR
RRLRSGPERYQALLRLGGPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTG
RFSLNLSLLSPSELECCRALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR

hide sequence

RefSeq Acc Id:	XP_005394606 ⟸ XM_005394549
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W1S9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDFRGIVLASHLKPLERKDK MSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWRRRLRSGPERYQALLRLG GPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTGRFSLNLSLLSPSELECC RALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR hide sequence

RefSeq Acc Id:	XP_013374828 ⟸ XM_013519374
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W1S9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDFRGIVLASHLKPLERKDK MSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWRRRLRSGPERYQALLRLG GPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTGRFSLNLSLLSPSELECC RALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR hide sequence

RefSeq Acc Id:	XP_013374829 ⟸ XM_013519375
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2W1S9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDFRGIVLASHLKPLERKDK MSGKRTAPWNCHATRRKTFQEDVAVEVSEEETPFQPGTSAEFYRDWRRRLRSGPERYQALLRLG GPTLGRLFQTDVGFGLLGELLATLANHMRPADRAAVLGILRGLAGTGRFSLNLSLLSPSELECC RALFEKLQAMGAPGAGAGQEALSGEQRGAEQEQDLLQELRELYQLR hide sequence

RefSeq Acc Id:

XP_013374830 ⟸ XM_013519376

- Peptide Label:

isoform X3

- Sequence:

show sequence

MLNPHQCALPSPAQACAMEENSMVDFKALEKELQAALAADEKYKRENAAKFRAVAQRVPSYEDF
RGIVLASHLKPLERKDKMSGKRTAPWNCHATRRKTFQEDVAVEVSEAGGDALPAWDLSRVLPRL
AATLAEWTRALPGSAAARGSHARPPLPDRRGVWTPRGAAGDPGQSHEASRPGSGAGHPSRPGGH
WALLPEPEPAEPLGA

hide sequence

RefSeq Acc Id:

ENSCLAP00000023932 ⟸ ENSCLAT00000024160

RefSeq Acc Id:

ENSCLAP00000023933 ⟸ ENSCLAT00000024161

Protein Domains

Dynein attachment factor N-terminal RNA-polymerase II-associated protein 3-like C-

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000016424	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000024160	ENTREZGENE
	ENSCLAT00000024160.1	UniProtKB/TrEMBL
	ENSCLAT00000024161.1	UniProtKB/TrEMBL
InterPro	CC103	UniProtKB/TrEMBL
	Dynein_attach_N	UniProtKB/TrEMBL
	RPAP3-like_C	UniProtKB/TrEMBL
NCBI Gene	LOC102018792	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 103	UniProtKB/TrEMBL
	PTHR28572	UniProtKB/TrEMBL
Pfam	Dynein_attach_N	UniProtKB/TrEMBL
	RPAP3_C	UniProtKB/TrEMBL
UniProt	A0A8C2W1S9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2W1V4_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Ccdc103	coiled-coil domain containing 103	LOC102018792	coiled-coil domain-containing protein 103-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - CTD

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