Tigar (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955413 | 2,129,678 - 2,154,380 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 2,129,719 - 2,153,873 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TIGAR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 4,321,213 - 4,360,028 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 4,307,763 - 4,360,028 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 4,430,379 - 4,469,194 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 4,300,620 - 4,339,455 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 4,300,631 - 4,332,599 | NCBI | | | | | Celera | 12 | 6,052,425 - 6,091,264 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | p13.32 | NCBI | | | | | HuRef | 12 | 4,287,018 - 4,325,825 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 4,429,992 - 4,468,805 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 4,327,996 - 4,366,805 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tigar (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 127,062,079 - 127,086,564 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 127,062,079 - 127,086,520 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 127,085,116 - 127,109,552 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 127,085,116 - 127,109,557 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 127,035,134 - 127,059,570 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 127,052,982 - 127,075,160 (-) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 6 | 127,984,031 - 128,005,972 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 128,766,834 - 128,786,116 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | F3 | NCBI | | | | | cM Map | 6 | 61.92 | NCBI | | | | |
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Tigar (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 161,613,306 - 161,632,248 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 159,927,136 - 159,946,077 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 159,927,139 - 159,946,029 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 166,156,946 - 166,175,860 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 161,939,848 - 161,958,766 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 160,573,896 - 160,592,815 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 159,635,145 - 159,654,108 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 159,635,153 - 159,654,063 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 231,948,786 - 231,966,869 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 163,481,393 - 163,502,412 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 148,642,195 - 148,661,115 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q42 | NCBI | | | | |
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TIGAR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 9,860,833 - 9,893,058 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 9,857,630 - 9,896,658 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 4,429,945 - 4,462,142 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 4,353,272 - 4,386,758 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 4,353,272 - 4,385,380 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TIGAR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 40,521,751 - 40,549,304 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 40,523,314 - 40,549,332 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 6,132,902 - 6,160,282 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 40,877,557 - 40,905,336 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 40,877,558 - 40,905,335 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 40,815,806 - 40,843,030 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 40,791,244 - 40,818,291 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 5,543,778 - 5,570,944 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tigar (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 104,632,126 - 104,665,630 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936606 | 4,518,584 - 4,540,114 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936606 | 4,518,525 - 4,540,109 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TIGAR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 66,044,686 - 66,067,377 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 66,044,679 - 66,067,571 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 68,266,609 - 68,289,947 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TIGAR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 4,354,911 - 4,381,762 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 4,355,053 - 4,381,273 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666063 | 3,861,799 - 3,888,740 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tigar (Heterocephalus glaber - naked mole-rat) |
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