Ing1 (inhibitor of growth family member 1) - Rat Genome Database

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Gene: Ing1 (inhibitor of growth family member 1) Chinchilla lanigera
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Symbol: Ing1
Name: inhibitor of growth family member 1
RGD ID: 8849921
Description: ENCODES a protein that exhibits methylated histone binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of cell death (ortholog); ASSOCIATED WITH Anal Atresia, Hypospadias, and Penoscrotal Inversion (ortholog); combined oxidative phosphorylation deficiency 27 (ortholog); contact dermatitis (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inhibitor of growth family, member 1; inhibitor of growth protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554041,998,912 - 1,999,613 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554041,998,665 - 1,999,615 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline

Genomics

Comparative Map Data
Ing1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554041,998,912 - 1,999,613 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554041,998,665 - 1,999,615 (-)NCBIChiLan1.0ChiLan1.0
ING1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813110,712,623 - 110,723,339 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl13110,712,736 - 110,723,339 (+)EnsemblGRCh38hg38GRCh38
GRCh3713111,364,970 - 111,375,686 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3613110,163,084 - 110,171,422 (+)NCBINCBI36hg18NCBI36
Build 3413110,163,625 - 110,171,421NCBI
Celera1392,211,252 - 92,219,600 (+)NCBI
Cytogenetic Map13q34NCBI
HuRef1391,963,392 - 91,971,853 (+)NCBIHuRef
CHM1_113111,333,082 - 111,341,534 (+)NCBICHM1_1
T2T-CHM13v2.013109,942,828 - 109,953,552 (+)NCBI
Ing1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39811,605,762 - 11,613,251 (+)NCBIGRCm39mm39
GRCm39 Ensembl811,605,571 - 11,613,251 (+)Ensembl
GRCm38811,555,762 - 11,563,251 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl811,555,571 - 11,563,251 (+)EnsemblGRCm38mm10GRCm38
MGSCv37811,556,066 - 11,563,250 (+)NCBIGRCm37mm9NCBIm37
MGSCv36811,556,038 - 11,563,222 (+)NCBImm8
Celera811,736,119 - 11,737,953 (+)NCBICelera
Cytogenetic Map8A1.1NCBI
Ing1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21677,937,276 - 77,945,320 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1677,937,279 - 77,946,264 (-)Ensembl
Rnor_6.01683,277,055 - 83,278,120 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1683,276,273 - 83,278,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01682,745,096 - 82,746,161 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41682,789,254 - 82,790,319 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11682,740,651 - 82,779,666 (-)NCBI
Celera1675,737,282 - 75,743,082 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
ING1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.113110,966,199 - 110,971,831 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01391,849,153 - 91,856,943 (+)NCBIMhudiblu_PPA_v0panPan3
ING1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12258,952,526 - 58,958,063 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2258,946,939 - 58,957,804 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2258,663,817 - 58,669,360 (+)NCBI
ROS_Cfam_1.02259,576,109 - 59,581,650 (+)NCBI
ROS_Cfam_1.0 Ensembl2259,576,109 - 59,581,391 (+)Ensembl
UMICH_Zoey_3.12259,078,248 - 59,083,790 (+)NCBI
UNSW_CanFamBas_1.02259,070,143 - 59,075,694 (+)NCBI
UU_Cfam_GSD_1.02259,106,235 - 59,111,785 (+)NCBI
Ing1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945193,812,246 - 193,819,522 (+)NCBI
SpeTri2.0NW_0049364722,132,991 - 2,140,343 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ING1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1177,270,320 - 77,277,068 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11177,270,272 - 77,278,346 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ING1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1388,935,764 - 88,943,887 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl388,937,297 - 88,943,046 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604645,700,604 - 45,708,993 (+)NCBIVero_WHO_p1.0
Ing1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247932,121,290 - 2,125,598 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247932,121,290 - 2,126,573 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000025859   ⟹   ENSCLAP00000025585
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554041,998,912 - 1,999,613 (-)Ensembl
RefSeq Acc Id: XM_013515751   ⟹   XP_013371205
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554041,998,665 - 1,999,615 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013371205 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013371205   ⟸   XM_013515751
- Sequence:
RefSeq Acc Id: ENSCLAP00000025585   ⟸   ENSCLAT00000025859
Protein Domains
PHD-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000017685 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000025585 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000025859 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro ING1 UniProtKB/TrEMBL
  ING_fam UniProtKB/TrEMBL
  ING_N_histone-binding UniProtKB/TrEMBL
  Zinc_finger_PHD-type_CS UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene LOC102012052 ENTREZGENE
PANTHER PTHR10333 UniProtKB/TrEMBL
  PTHR10333:SF85 UniProtKB/TrEMBL
Pfam ING UniProtKB/TrEMBL
PROSITE ZF_PHD_1 UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART ING UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
Superfamily-SCOP SSF57903 UniProtKB/TrEMBL
UniProt A0A8C2WCX7_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Ing1  inhibitor of growth family member 1    inhibitor of growth family, member 1  Symbol and/or name change 5135510 APPROVED
2015-08-25 Ing1  inhibitor of growth family, member 1  LOC102012052  inhibitor of growth protein 1-like  Symbol and/or name change 5135510 APPROVED