Ano5 (anoctamin 5) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Ano5 (anoctamin 5) Chinchilla lanigera
Analyze
Symbol: Ano5
Name: anoctamin 5
RGD ID: 8849789
Description: ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); plasma membrane repair (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog); vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: anoctamin-5
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554762,694,258 - 2,779,304 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554762,705,596 - 2,777,848 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ano5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554762,694,258 - 2,779,304 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554762,705,596 - 2,777,848 (+)NCBIChiLan1.0ChiLan1.0
ANO5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381122,192,473 - 22,283,357 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1121,782,659 - 22,283,567 (+)EnsemblGRCh38hg38GRCh38
GRCh371122,214,631 - 22,304,903 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361122,171,298 - 22,257,975 (+)NCBINCBI36Build 36hg18NCBI36
Build 341122,171,297 - 22,257,975NCBI
Celera1122,346,769 - 22,437,966 (+)NCBICelera
Cytogenetic Map11p14.3NCBI
HuRef1121,897,150 - 21,988,511 (+)NCBIHuRef
CHM1_11122,214,324 - 22,304,648 (+)NCBICHM1_1
T2T-CHM13v2.01122,313,008 - 22,403,882 (+)NCBIT2T-CHM13v2.0
Ano5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39751,160,668 - 51,248,459 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl751,160,777 - 51,248,457 (+)EnsemblGRCm39 Ensembl
GRCm38751,510,007 - 51,598,707 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl751,511,029 - 51,598,709 (+)EnsemblGRCm38mm10GRCm38
MGSCv37758,766,399 - 58,854,079 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36751,379,048 - 51,466,728 (+)NCBIMGSCv36mm8
Celera748,889,506 - 48,979,118 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map732.76NCBI
Ano5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81110,222,411 - 110,323,505 (+)NCBIGRCr8
mRatBN7.21101,086,490 - 101,187,547 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1101,087,341 - 101,187,555 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01106,873,580 - 106,971,769 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1106,896,790 - 106,968,885 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01107,915,458 - 108,013,421 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41101,298,300 - 101,341,709 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera195,261,635 - 95,360,097 (+)NCBICelera
Cytogenetic Map1q22NCBI
ANO5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2924,478,884 - 24,572,951 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11124,438,258 - 24,532,291 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,201,694 - 22,295,781 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11122,112,466 - 22,203,925 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1122,112,482 - 22,206,637 (+)Ensemblpanpan1.1panPan2
ANO5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12143,903,422 - 43,986,778 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2143,903,537 - 43,984,822 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2143,389,226 - 43,459,917 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02145,009,529 - 45,104,081 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2145,009,540 - 45,102,880 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12144,030,402 - 44,101,274 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02144,203,022 - 44,273,728 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02144,595,596 - 44,666,444 (+)NCBIUU_Cfam_GSD_1.0
Ano5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494740,949,492 - 41,035,567 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366542,891,013 - 2,977,551 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366542,891,019 - 2,976,465 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANO5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl237,171,412 - 37,255,489 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1237,171,402 - 37,256,204 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2240,382,286 - 40,466,462 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANO5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,722,072 - 42,823,340 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl142,722,015 - 42,822,374 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038140,032,681 - 140,132,071 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ano5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476613,224,295 - 13,294,968 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476613,220,250 - 13,301,447 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000003501   ⟹   ENSCLAP00000003431
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554762,694,258 - 2,779,304 (+)Ensembl
RefSeq Acc Id: XM_013503010   ⟹   XP_013358464
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554762,705,596 - 2,777,848 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013358464 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000003431
  ENSCLAP00000003431.1
RefSeq Acc Id: XP_013358464   ⟸   XM_013503010
- UniProtKB: A0A8C2YJL3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000003431   ⟸   ENSCLAT00000003501

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002451 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000003501 ENTREZGENE
  ENSCLAT00000003501.1 UniProtKB/TrEMBL
InterPro Anoct_dimer UniProtKB/TrEMBL
  Anoctamin UniProtKB/TrEMBL
  Anoctamin_TM UniProtKB/TrEMBL
NCBI Gene Ano5 ENTREZGENE
PANTHER PTHR12308 UniProtKB/TrEMBL
  PTHR12308:SF23 UniProtKB/TrEMBL
Pfam Anoct_dimer UniProtKB/TrEMBL
  Anoctamin UniProtKB/TrEMBL
UniProt A0A8C2YJL3 ENTREZGENE, UniProtKB/TrEMBL