Rps19 (ribosomal protein S19) - Rat Genome Database

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Gene: Rps19 (ribosomal protein S19) Chinchilla lanigera
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Symbol: Rps19
Name: ribosomal protein S19
RGD ID: 8845591
Description: ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 1 (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: 40S ribosomal protein S19
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955555969,340 - 976,509 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955555969,345 - 976,122 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Rps19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955555969,340 - 976,509 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955555969,345 - 976,122 (-)NCBIChiLan1.0ChiLan1.0
RPS19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1941,860,255 - 41,872,925 (+)EnsemblGRCh38hg38GRCh38
GRCh381941,860,255 - 41,872,925 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371942,364,325 - 42,376,993 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361947,055,828 - 47,067,324 (+)NCBINCBI36hg18NCBI36
Build 341947,055,827 - 47,067,322NCBI
Celera1939,163,675 - 39,175,171 (+)NCBI
Cytogenetic Map19q13.2NCBI
HuRef1938,795,270 - 38,806,767 (+)NCBIHuRef
CHM1_11942,365,453 - 42,376,951 (+)NCBICHM1_1
Rps19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39724,584,017 - 24,589,236 (+)NCBIGRCm39mm39
GRCm39 Ensembl724,583,796 - 24,589,231 (+)Ensembl
GRCm38724,884,592 - 24,889,811 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl724,884,371 - 24,889,806 (+)EnsemblGRCm38mm10GRCm38
MGSCv37725,669,733 - 25,674,821 (+)NCBIGRCm37mm9NCBIm37
MGSCv36724,593,474 - 24,598,562 (+)NCBImm8
Celera719,500,610 - 19,505,697 (+)NCBICelera
Cytogenetic Map7A3NCBI
Rps19l2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2180,480,718 - 80,486,511 (+)NCBI
Rnor_6.0 Ensembl181,750,928 - 81,756,627 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0916,802,280 - 16,807,982 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0183,007,889 - 83,013,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4180,176,649 - 80,182,351 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1180,254,777 - 80,260,460 (+)NCBI
Celera174,928,360 - 74,934,062 (+)NCBICelera
Cytogenetic Map9q12NCBI
RPS19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11947,254,157 - 47,264,953 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1947,254,157 - 47,264,953 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01938,748,604 - 38,760,055 (+)NCBIMhudiblu_PPA_v0panPan3
RPS19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11112,418,800 - 112,427,445 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1112,411,281 - 112,427,381 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1111,855,118 - 111,863,708 (-)NCBI
ROS_Cfam_1.01113,042,734 - 113,051,324 (-)NCBI
UMICH_Zoey_3.11112,596,102 - 112,604,692 (-)NCBI
UNSW_CanFamBas_1.01112,232,253 - 112,240,642 (-)NCBI
UU_Cfam_GSD_1.01113,158,731 - 113,167,322 (-)NCBI
Rps19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934916,221,100 - 16,228,630 (-)NCBI
SpeTri2.0NW_004936706568,443 - 575,973 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,000,219 - 50,009,592 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,003,198 - 50,010,135 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,056,524 - 46,063,482 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPS19
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1636,067,959 - 36,085,581 (+)NCBI
Rps19
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624907811,069 - 818,218 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000001523   ⟹   ENSCLAP00000001480
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955555969,340 - 976,509 (-)Ensembl
RefSeq Acc Id: XM_005412419   ⟹   XP_005412476
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955555969,345 - 976,119 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013508719   ⟹   XP_013364173
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955555969,345 - 976,122 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005412476 (Get FASTA)   NCBI Sequence Viewer  
  XP_013364173 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005412476   ⟸   XM_005412419
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013364173   ⟸   XM_013508719
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000001480   ⟸   ENSCLAT00000001523


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000001110 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000001480 ENTREZGENE
Ensembl Transcript ENSCLAT00000001523 ENTREZGENE
NCBI Gene Rps19 ENTREZGENE