Nkain3 (sodium/potassium transporting ATPase interacting 3) - Rat Genome Database

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Gene: Nkain3 (sodium/potassium transporting ATPase interacting 3) Chinchilla lanigera
Analyze
Symbol: Nkain3
Name: sodium/potassium transporting ATPase interacting 3
RGD ID: 8841805
Description: ASSOCIATED WITH genetic disease (ortholog); FOUND IN membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Na+/K+ transporting ATPase interacting 3; sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544415,974,028 - 16,103,177 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Nkain3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544415,974,028 - 16,103,177 (-)NCBIChiLan1.0ChiLan1.0
NKAIN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38862,248,854 - 62,999,652 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl862,248,591 - 63,014,000 (+)EnsemblGRCh38hg38GRCh38
GRCh37863,161,413 - 63,912,211 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36863,324,055 - 64,066,182 (+)NCBINCBI36Build 36hg18NCBI36
Celera859,151,524 - 59,893,831 (+)NCBICelera
Cytogenetic Map8q12.3NCBI
HuRef858,649,471 - 59,391,498 (+)NCBIHuRef
CHM1_1863,214,359 - 63,956,619 (+)NCBICHM1_1
T2T-CHM13v2.0862,672,922 - 63,424,229 (+)NCBIT2T-CHM13v2.0
Nkain3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39420,111,029 - 20,779,990 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl420,118,874 - 20,778,866 (-)EnsemblGRCm39 Ensembl
GRCm38420,111,029 - 20,780,709 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl420,118,874 - 20,778,866 (-)EnsemblGRCm38mm10GRCm38
MGSCv37420,170,994 - 20,705,815 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36420,334,682 - 20,869,503 (-)NCBIMGSCv36mm8
Celera419,993,374 - 20,525,440 (-)NCBICelera
Cytogenetic Map4A3NCBI
cM Map47.82NCBI
Nkain3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8538,410,576 - 39,106,910 (-)NCBIGRCr8
mRatBN7.2533,613,720 - 34,310,090 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl533,623,713 - 34,309,381 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx535,744,865 - 36,423,667 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0537,337,085 - 38,016,436 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0537,276,596 - 37,955,929 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0534,133,596 - 34,813,668 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl534,174,411 - 34,813,116 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0538,786,929 - 39,465,621 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4534,764,661 - 35,477,296 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera532,699,788 - 33,363,832 (-)NCBICelera
Cytogenetic Map5q13-q21NCBI
NKAIN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2777,971,652 - 78,711,151 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1853,611,463 - 54,364,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0858,774,416 - 59,532,321 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1860,455,259 - 61,206,749 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl860,455,390 - 61,197,361 (+)Ensemblpanpan1.1panPan2
NKAIN3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12912,503,313 - 13,117,787 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2912,503,407 - 13,120,451 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2912,825,352 - 13,445,464 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02912,603,297 - 13,220,465 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2912,603,379 - 13,223,136 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12912,613,301 - 13,231,837 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02912,731,334 - 13,348,658 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02913,000,427 - 13,614,794 (+)NCBIUU_Cfam_GSD_1.0
Nkain3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530363,673,482 - 64,261,655 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649610,535,300 - 11,111,525 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649610,535,034 - 11,111,948 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NKAIN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl471,069,144 - 71,608,429 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1471,040,646 - 71,608,499 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2477,334,136 - 77,666,248 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NKAIN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1858,148,066 - 58,893,148 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603982,725,792 - 83,499,016 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nkain3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474428,829,789 - 29,508,784 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474428,827,355 - 29,508,869 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013518132   ⟹   XP_013373586
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544415,974,028 - 16,103,177 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013373586 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_013373586   ⟸   XM_013518132
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Nkain3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-28 Nkain3  sodium/potassium transporting ATPase interacting 3    Sodium/potassium transporting ATPase interacting 3  Symbol and/or name change 5135510 APPROVED
2016-12-13 Nkain3  Sodium/potassium transporting ATPase interacting 3    Na+/K+ transporting ATPase interacting 3  Symbol and/or name change 5135510 APPROVED