Ldlrap1 (low density lipoprotein receptor adaptor protein 1) - Rat Genome Database
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Gene: Ldlrap1 (low density lipoprotein receptor adaptor protein 1) Chinchilla lanigera
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Symbol: Ldlrap1
Name: low density lipoprotein receptor adaptor protein 1
RGD ID: 8841591
Description: ENCODES a protein that exhibits amyloid-beta binding (ortholog); AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to cytokine stimulus (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog); FOUND IN axon (ortholog); basal plasma membrane (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: low density lipoprotein receptor adapter protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554525,081,556 - 5,095,182 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554525,081,919 - 5,102,349 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References


Genomics

Comparative Map Data
Ldlrap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554525,081,556 - 5,095,182 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554525,081,919 - 5,102,349 (+)NCBIChiLan1.0ChiLan1.0
LDLRAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl125,543,580 - 25,568,886 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl125,543,606 - 25,568,886 (+)EnsemblGRCh38hg38GRCh38
GRCh38125,543,588 - 25,590,400 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37125,870,097 - 25,895,377 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36125,742,663 - 25,767,964 (+)NCBINCBI36hg18NCBI36
Celera124,265,963 - 24,291,423 (+)NCBI
Cytogenetic Map1p36.11NCBI
HuRef124,124,497 - 24,149,801 (+)NCBIHuRef
CHM1_1125,983,497 - 26,008,795 (+)NCBICHM1_1
Ldlrap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394134,468,865 - 134,495,342 (-)NCBIGRCm39mm39
GRCm39 Ensembl4134,468,865 - 134,495,335 (-)Ensembl
GRCm384134,741,554 - 134,768,032 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4134,741,554 - 134,768,024 (-)EnsemblGRCm38mm10GRCm38
MGSCv374134,301,327 - 134,323,919 (-)NCBIGRCm37mm9NCBIm37
MGSCv364134,017,498 - 134,040,023 (-)NCBImm8
Celera4132,929,656 - 132,952,236 (-)NCBICelera
Cytogenetic Map4D3NCBI
Ldlrap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25146,955,607 - 146,978,601 (-)NCBI
Rnor_6.0 Ensembl5152,966,591 - 152,987,211 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.05152,964,294 - 152,987,286 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05156,742,863 - 156,765,855 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45153,504,535 - 153,527,523 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5145,368,945 - 145,391,939 (-)NCBICelera
Cytogenetic Map5q36NCBI
LDLRAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1125,871,874 - 25,920,550 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl125,878,358 - 25,903,336 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0124,809,535 - 24,852,394 (+)NCBIMhudiblu_PPA_v0panPan3
LDLRAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl274,341,036 - 74,364,162 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1274,340,272 - 74,363,929 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ldlrap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647410,196,228 - 10,219,137 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LDLRAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl683,030,701 - 83,054,381 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1683,030,629 - 83,054,387 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2676,601,373 - 76,625,132 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LDLRAP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120107,207,363 - 107,232,237 (-)NCBI
Ldlrap1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247649,675,917 - 9,699,597 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000020081   ⟹   ENSCLAP00000019888
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554525,081,556 - 5,095,182 (+)Ensembl
RefSeq Acc Id: XM_013519648   ⟹   XP_013375102
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554525,081,919 - 5,102,349 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013375102 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013375102   ⟸   XM_013519648
- Sequence:
RefSeq Acc Id: ENSCLAP00000019888   ⟸   ENSCLAT00000020081


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000013635 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000019888 ENTREZGENE
Ensembl Transcript ENSCLAT00000020081 ENTREZGENE
NCBI Gene Ldlrap1 ENTREZGENE