Nacad (NAC alpha domain containing) - Rat Genome Database

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Gene: Nacad (NAC alpha domain containing) Chinchilla lanigera
Analyze
Symbol: Nacad
Name: NAC alpha domain containing
RGD ID: 8836777
Description: ASSOCIATED WITH cerebral cavernous malformation 2 (ortholog); pleomorphic xanthoastrocytoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: NAC-alpha domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554567,224,202 - 7,230,660 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554567,224,224 - 7,230,736 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References


Genomics

Comparative Map Data
Nacad
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554567,224,202 - 7,230,660 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554567,224,224 - 7,230,736 (+)NCBIChiLan1.0ChiLan1.0
NACAD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl745,080,437 - 45,088,969 (-)EnsemblGRCh38hg38GRCh38
GRCh38745,080,432 - 45,089,452 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37745,120,036 - 45,128,568 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36745,067,578 - 45,095,757 (-)NCBINCBI36hg18NCBI36
Celera745,218,992 - 45,227,329 (-)NCBI
Cytogenetic Map7p13NCBI
HuRef745,004,007 - 45,012,344 (-)NCBIHuRef
CHM1_1745,123,853 - 45,132,190 (-)NCBICHM1_1
CRA_TCAGchr7v2745,159,326 - 45,167,663 (-)NCBI
Nacad
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,547,814 - 6,556,059 (-)NCBIGRCm39mm39
GRCm39 Ensembl116,547,823 - 6,556,053 (-)Ensembl
GRCm38116,597,814 - 6,606,059 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,597,823 - 6,606,053 (-)EnsemblGRCm38mm10GRCm38
MGSCv37116,497,826 - 6,506,057 (-)NCBIGRCm37mm9NCBIm37
MGSCv36116,497,823 - 6,506,057 (-)NCBImm8
MGSCv36116,482,285 - 6,490,519 (-)NCBImm8
Cytogenetic Map11A1NCBI
Nacad
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21481,465,299 - 81,473,866 (-)NCBI
Rnor_6.0 Ensembl1486,860,608 - 86,868,598 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01486,860,607 - 86,868,605 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01480,494,051 - 80,502,042 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,354,263 - 87,363,221 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1480,347,050 - 80,355,532 (-)NCBICelera
Cytogenetic Map14q21NCBI
NACAD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1745,861,001 - 45,869,388 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0745,794,340 - 45,802,532 (-)NCBIMhudiblu_PPA_v0panPan3
NACAD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11610,393,993 - 10,394,424 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha162,610,385 - 2,618,972 (-)NCBI
ROS_Cfam_1.01614,241,933 - 14,250,521 (+)NCBI
UNSW_CanFamBas_1.01613,875,029 - 13,883,618 (+)NCBI
UU_Cfam_GSD_1.01613,854,540 - 13,863,130 (+)NCBI
Nacad
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118100,672,261 - 100,682,284 (-)NCBI
SpeTri2.0NW_00493647819,883,992 - 19,893,917 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NACAD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11850,385,116 - 50,394,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21855,216,074 - 55,225,617 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NACAD
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12113,594,969 - 13,603,436 (+)NCBI
ChlSab1.1 Ensembl2113,598,304 - 13,605,614 (+)Ensembl
Nacad
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247407,299,294 - 7,307,056 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008071   ⟹   ENSCLAP00000007951
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554567,224,202 - 7,230,660 (+)Ensembl
RefSeq Acc Id: XM_013520513   ⟹   XP_013375967
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554567,224,224 - 7,230,736 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013375967 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013375967   ⟸   XM_013520513
- Sequence:
RefSeq Acc Id: ENSCLAP00000007951   ⟸   ENSCLAT00000008071


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000005578 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000007951 ENTREZGENE
Ensembl Transcript ENSCLAT00000008071 ENTREZGENE
NCBI Gene Nacad ENTREZGENE