Fcer2 (Fc fragment of IgE receptor II) - Rat Genome Database

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Gene: Fcer2 (Fc fragment of IgE receptor II) Chinchilla lanigera
Analyze
Symbol: Fcer2
Name: Fc fragment of IgE receptor II
RGD ID: 8832642
Description: INVOLVED IN positive regulation of humoral immune response mediated by circulating immunoglobulin (ortholog); positive regulation of killing of cells of another organism (ortholog); positive regulation of nitric-oxide synthase activity (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH encephalitis (ortholog); familial hemophagocytic lymphohistiocytosis 5 (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN external side of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Fc fragment of IgE, low affinity II, receptor for (CD23); low affinity immunoglobulin epsilon Fc receptor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555631,587,396 - 1,596,063 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References


Genomics

Comparative Map Data
Fcer2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555631,587,396 - 1,596,063 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBIChiLan1.0ChiLan1.0
FCER2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38197,688,776 - 7,702,131 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl197,688,758 - 7,702,146 (-)EnsemblGRCh38hg38GRCh38
GRCh37197,753,662 - 7,767,017 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,659,662 - 7,672,997 (-)NCBINCBI36hg18NCBI36
Build 34197,659,662 - 7,672,997NCBI
Celera197,624,825 - 7,638,156 (-)NCBI
Cytogenetic Map19p13.2NCBI
HuRef197,423,283 - 7,436,591 (-)NCBIHuRef
CHM1_1197,753,396 - 7,766,778 (-)NCBICHM1_1
Fcer2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3983,730,280 - 3,744,174 (-)NCBIGRCm39mm39
GRCm39 Ensembl83,731,737 - 3,744,175 (-)Ensembl
GRCm3883,680,280 - 3,694,174 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl83,681,737 - 3,694,175 (-)EnsemblGRCm38mm10GRCm38
MGSCv3783,681,737 - 3,694,174 (-)NCBIGRCm37mm9NCBIm37
MGSCv3683,681,737 - 3,694,174 (-)NCBImm8
Celera83,912,066 - 3,924,335 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map81.92NCBI
Fcer2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2121,742,809 - 1,754,476 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl121,742,815 - 1,754,476 (-)Ensembl
Rnor_6.0122,233,772 - 2,245,324 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,233,778 - 2,245,324 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,395,817 - 4,407,330 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,444,054 - 2,469,678 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1122,447,138 - 2,469,004 (+)NCBI
Celera123,598,585 - 3,609,695 (-)NCBICelera
Cytogenetic Map12p12NCBI
FCER2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1197,833,851 - 7,843,510 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl197,834,106 - 7,844,924 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0196,978,116 - 6,989,986 (-)NCBIMhudiblu_PPA_v0panPan3
FCER2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,451,637 - 52,460,045 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,449,922 - 52,457,805 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,253,368 - 52,263,431 (-)NCBI
ROS_Cfam_1.02052,978,663 - 52,988,716 (-)NCBI
ROS_Cfam_1.0 Ensembl2052,978,667 - 52,988,860 (-)Ensembl
UMICH_Zoey_3.12052,182,355 - 52,192,411 (-)NCBI
UNSW_CanFamBas_1.02052,625,971 - 52,636,029 (-)NCBI
UU_Cfam_GSD_1.02052,858,468 - 52,867,199 (-)NCBI
Fcer2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118213,110,119 - 213,115,336 (+)NCBI
SpeTri2.0NW_0049365884,717,010 - 4,724,664 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCER2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl271,453,824 - 71,468,149 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1271,454,046 - 71,468,149 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2271,988,805 - 72,000,976 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FCER2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.167,175,032 - 7,189,002 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl67,175,032 - 7,189,057 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666081672,398 - 686,312 (+)NCBIVero_WHO_p1.0
Fcer2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624828747,800 - 754,185 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000003434   ⟹   ENSCLAP00000003366
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555631,587,396 - 1,596,063 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000003435   ⟹   ENSCLAP00000003367
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555631,588,656 - 1,596,063 (+)Ensembl
RefSeq Acc Id: XM_005413162   ⟹   XP_005413219
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509156   ⟹   XP_013364610
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509157   ⟹   XP_013364611
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,588,958 - 1,596,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509158   ⟹   XP_013364612
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,587,749 - 1,596,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509159   ⟹   XP_013364613
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013509160   ⟹   XP_013364614
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555631,587,471 - 1,596,707 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005413219   ⟸   XM_005413162
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013364610   ⟸   XM_013509156
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013364613   ⟸   XM_013509159
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013364614   ⟸   XM_013509160
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013364612   ⟸   XM_013509158
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013364611   ⟸   XM_013509157
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000003366   ⟸   ENSCLAT00000003434
RefSeq Acc Id: ENSCLAP00000003367   ⟸   ENSCLAT00000003435


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002410 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCLAP00000003366 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAP00000003367 UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000003434 ENTREZGENE, UniProtKB/TrEMBL
  ENSCLAT00000003435 UniProtKB/TrEMBL
NCBI Gene Fcer2 ENTREZGENE
UniProt A0A8C2UT69_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Fcer2  Fc fragment of IgE receptor II    Fc fragment of IgE, low affinity II, receptor for (CD23)  Symbol and/or name change 5135510 APPROVED