Cep57 (centrosomal protein 57) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Cep57 (centrosomal protein 57) Chinchilla lanigera
Analyze
Symbol: Cep57
Name: centrosomal protein 57
RGD ID: 8832245
Description: ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); protein homooligomerization (ortholog); spermatid development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); mosaic variegated aneuploidy syndrome (ortholog); mosaic variegated aneuploidy syndrome 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: centrosomal protein 57kDa; centrosomal protein of 57 kDa
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955412638,718 - 693,837 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Cep57
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955412638,718 - 693,837 (+)NCBIChiLan1.0ChiLan1.0
CEP57
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1195,789,965 - 95,832,693 (+)EnsemblGRCh38hg38GRCh38
GRCh381195,790,471 - 95,832,693 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371195,523,662 - 95,565,857 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361195,163,290 - 95,205,502 (+)NCBINCBI36hg18NCBI36
Celera1192,822,024 - 92,864,242 (+)NCBI
Cytogenetic Map11q21NCBI
HuRef1191,589,397 - 91,631,656 (+)NCBIHuRef
CHM1_11195,406,634 - 95,448,873 (+)NCBICHM1_1
Cep57
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39913,717,979 - 13,738,698 (-)NCBIGRCm39mm39
GRCm39 Ensembl913,719,088 - 13,738,403 (-)Ensembl
GRCm38913,807,783 - 13,827,407 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl913,807,792 - 13,827,107 (-)EnsemblGRCm38mm10GRCm38
MGSCv37913,612,232 - 13,631,537 (-)NCBIGRCm37mm9NCBIm37
MGSCv36913,558,192 - 13,577,449 (-)NCBImm8
Celera911,086,224 - 11,105,529 (-)NCBICelera
Cytogenetic Map9A1NCBI
Cep57
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2810,669,588 - 10,689,257 (-)NCBI
Rnor_6.0 Ensembl812,335,432 - 12,355,091 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0812,335,430 - 12,355,425 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0812,285,706 - 12,305,716 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4810,608,688 - 10,627,914 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1810,608,258 - 10,628,586 (-)NCBI
Celera812,170,101 - 12,189,763 (-)NCBICelera
Cytogenetic Map8q12NCBI
CEP57
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11194,322,862 - 94,365,643 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01190,795,277 - 90,838,166 (+)NCBIMhudiblu_PPA_v0panPan3
CEP57
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1215,314,290 - 5,360,474 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl215,314,449 - 5,361,154 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha215,306,946 - 5,372,017 (-)NCBI
ROS_Cfam_1.0215,470,572 - 5,535,631 (-)NCBI
UMICH_Zoey_3.1215,265,268 - 5,330,343 (-)NCBI
UNSW_CanFamBas_1.0215,326,888 - 5,391,987 (-)NCBI
UU_Cfam_GSD_1.0215,374,577 - 5,439,676 (-)NCBI
Cep57
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494780,630,996 - 80,670,623 (+)NCBI
SpeTri2.0NW_0049367001,874,509 - 1,914,688 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP57
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl927,812,917 - 27,859,568 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1927,812,944 - 27,858,293 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2931,728,611 - 31,738,258 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEP57
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1187,046,915 - 87,088,999 (+)NCBI
ChlSab1.1 Ensembl187,046,639 - 87,093,786 (+)Ensembl
Vero_WHO_p1.0NW_02366604338,725,753 - 38,769,778 (-)NCBI
Cep57
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473540,647,104 - 40,670,640 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013511046   ⟹   XP_013366500
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955412638,718 - 690,489 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511047   ⟹   XP_013366501
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955412638,721 - 690,489 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511048   ⟹   XP_013366502
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955412638,721 - 693,837 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013366500 (Get FASTA)   NCBI Sequence Viewer  
  XP_013366501 (Get FASTA)   NCBI Sequence Viewer  
  XP_013366502 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013366500   ⟸   XM_013511046
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013366502   ⟸   XM_013511048
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013366501   ⟸   XM_013511047
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011257 ENTREZGENE
Ensembl Protein ENSCLAP00000016364 ENTREZGENE
Ensembl Transcript ENSCLAT00000016528 ENTREZGENE
NCBI Gene Cep57 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Cep57  centrosomal protein 57    centrosomal protein 57kDa  Symbol and/or name change 5135510 APPROVED