Eola1 (endothelium and lymphocyte associated ASCH domain 1)

Gene: Eola1 (endothelium and lymphocyte associated ASCH domain 1) Chinchilla lanigera

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Symbol:

Eola1

Name:

endothelium and lymphocyte associated ASCH domain 1

RGD ID:

8830862

Description:

INVOLVED IN regulation of gene expression (ortholog); regulation of interleukin-6 production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); syndromic X-linked intellectual disability Lubs type (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chromosome unknown open reading frame, human CXorf40A; LOC102021893

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955498	1,911,103 - 1,916,645 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of gene expression (ISO)

regulation of interleukin-6 production (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Eola1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955498	1,911,103 - 1,916,645 (+)	NCBI	ChiLan1.0	ChiLan1.0

EOLA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	149,540,601 - 149,555,345 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	149,540,355 - 149,550,510 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	148,622,146 - 148,636,889 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	148,430,463 - 148,436,760 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	148,328,316 - 148,334,613	NCBI
Celera	X	148,971,238 - 148,980,804 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	137,575,573 - 137,585,411 (+)	NCBI		HuRef
CHM1_1	X	148,583,532 - 148,593,099 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	147,806,368 - 147,821,110 (+)	NCBI		T2T-CHM13v2.0

Eola1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	69,429,519 - 69,433,022 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	69,429,483 - 69,433,023 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	70,385,913 - 70,389,416 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	70,385,877 - 70,389,417 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	67,639,088 - 67,642,591 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	66,646,469 - 66,649,972 (+)	NCBI		MGSCv36	mm8
Cytogenetic Map	X	A7.2	NCBI
cM Map	X	36.02	NCBI

LOC100969417
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	148,845,647 - 148,855,437 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	148,849,462 - 148,857,817 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	139,344,647 - 139,354,947 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

EOLA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	117,536,100 - 117,559,404 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
ROS_Cfam_1.0	X	119,594,974 - 119,617,352 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	119,594,984 - 119,617,349 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	116,706,963 - 116,729,273 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	118,918,298 - 118,940,652 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	119,549,239 - 119,571,605 (-)	NCBI		UU_Cfam_GSD_1.0

LOC100515119
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	X	121,769,595 - 121,777,428 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	139,227,098 - 139,231,267 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EOLA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666065	61,938,028 - 61,941,151 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005406399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01062753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01129367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005406399 ⟹ XP_005406456

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955498	1,911,103 - 1,916,645 (+)	NCBI

Sequence:

show sequence

GGGGAGGACGCTCACTGGTGCATACTTCCTGCCTAGGCCTTTCCCAAAAGCGGCTGCGAAGTCT
GGGACAAGGCAGAAGAGTGGATGCCTGCGAGCTGAGGTGAAGAACCTGAGAGGAGCAGCAGAGG
AGTATTCCTCCTTGAGGCACAAAGCAGGCCCAGGAGCCCGAGGAAGATGAAGTTTGGCTGTCTT
TCCTTCTGGCAGCCTTACGCTGGTTTTGTCTTAAATGGAGTCAAAACCCTGGAGACTCGGTGGC
GTCCCTTGCTGAGCACCCACAAGAACTGTACCGTCGCCATCCACATCGCTCACAGGGACTGGGA
AGATGACAGCTGGTGGCAGCTGCTGGTGGAGAGGCTGGGGATGAGCCCCGCGCAGATTCAGGCC
TTGCTGCAGGAAGGGGAAAGGTTCGGCCGAGGCGTGATCGCTGGGCTTGTTGACATCGGGGAAA
CGTTGCAGTGCCCAGGCGACTTAGCCCCCGAGGAGCTTGTGGCCCTGGAAAATCAAGCAGTCCT
GACCAACCTGACGCACAAGTACCTGACAGTGATTTCCAACCCCAGGTGGTTACTGCAGCCCTTC
CCGAGGAAAGGGGGGAAGGATGTGTTCCAGGTGGACGTCCCGGAGCACCTGATCCCTTTGGCCC
CCGAGTTGTGACCCTTGTGGGCTCCAGGGAGAAGCGTCACTGAGAGGCCAACTAAATCATGGCA
CAGTTCCCTCATCATGGTGCAGACCTGGAAAAGCAGCTTCAGTCCGAATCGCCACTGCCCTGCG
TGGTGCTGCTCCCTGAGTGCTGTTCTCAGGCACAGACTTCTGTACCCAGGTGAAGGGAATGGGG
GGCAGGACTTCCTTCCTTTGGGTTCATAGACAGTGTCTCAAGTACCTTGACCTTTAGTGCCCGG
AGCGTCTTGGCGTTGCCCCGACTCTGGTCTGCTACTTTCACATAGTACAAATAAATGTGTTCAT
GATAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005406456	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000002042
	ENSCLAP00000002042.1

RefSeq Acc Id:	XP_005406456 ⟸ XM_005406399
- UniProtKB:	A0A8C2UNK3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKFGCLSFWQPYAGFVLNGVKTLETRWRPLLSTHKNCTVAIHIAHRDWEDDSWWQLLVERLGMS PAQIQALLQEGERFGRGVIAGLVDIGETLQCPGDLAPEELVALENQAVLTNLTHKYLTVISNPR WLLQPFPRKGGKDVFQVDVPEHLIPLAPEL hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000001484	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000002087	ENTREZGENE
	ENSCLAT00000002087.1	UniProtKB/TrEMBL
InterPro	EOLA1/EOLA2	UniProtKB/TrEMBL
	PUA-like_sf	UniProtKB/TrEMBL
NCBI Gene	LOC102021893	ENTREZGENE
PANTHER	PROTEIN EOLA1-RELATED	UniProtKB/TrEMBL
	PTHR31666	UniProtKB/TrEMBL
Superfamily-SCOP	SSF88697	UniProtKB/TrEMBL
UniProt	A0A8C2UNK3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-11-05	Eola1	endothelium and lymphocyte associated ASCH domain 1	LOC102021893	chromosome unknown open reading frame, human CXorf40A	Symbol and/or name change	5135510	APPROVED
2015-08-25	LOC102021893	chromosome unknown open reading frame, human CXorf40A		uncharacterized LOC102021893	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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