Stx1a (syntaxin 1A) - Rat Genome Database

Name: Stx1a
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Stx1a (syntaxin 1A) Chinchilla lanigera

Analyze

Symbol:

Stx1a

Name:

syntaxin 1A

RGD ID:

8828511

Description:

ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); calcium channel inhibitor activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); hormone secretion (ortholog); insulin secretion (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Creutzfeldt-Jakob disease (ortholog); FOUND IN acrosomal vesicle (ortholog); actomyosin (ortholog); axon (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

syntaxin 1A (brain); syntaxin-1A

RGD Orthologs

Human

Mouse

Rat

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STX1A (syntaxin 1A)	NCBI	Ortholog
Mus musculus (house mouse):	Stx1a (syntaxin 1A (brain))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Stx1a (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STX1A (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	STX1A (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Stx1a (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	STX1A (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Stx1a (syntaxin 1A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	14,030,226 - 14,046,456 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	14,030,233 - 14,046,456 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

Creutzfeldt-Jakob disease (ISO)

Hirschsprung's disease (ISO)

intestinal volvulus (ISO)

Neurodevelopmental Disorders (ISO)

pleomorphic xanthoastrocytoma (ISO)

schizophrenia (ISO)

Volvulus Of Midgut (ISO)

Williams-Beuren syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium-ion regulated exocytosis (ISO)

hormone secretion (ISO)

insulin secretion (ISO)

modulation of excitatory postsynaptic potential (ISO)

positive regulation of calcium ion-dependent exocytosis (ISO)

positive regulation of catecholamine secretion (ISO)

positive regulation of excitatory postsynaptic potential (ISO)

positive regulation of exocytosis (ISO)

positive regulation of neurotransmitter secretion (ISO)

positive regulation of norepinephrine secretion (ISO)

protein localization to membrane (ISO)

protein sumoylation (ISO)

regulated exocytosis (ISO)

regulation of exocytosis (ISO)

regulation of synaptic vesicle priming (ISO)

response to gravity (ISO)

secretion by cell (ISO)

SNARE complex assembly (ISO)

synaptic vesicle docking (ISO)

synaptic vesicle endocytosis (ISO)

synaptic vesicle exocytosis (ISO)

synaptic vesicle fusion to presynaptic active zone membrane (ISO)

vesicle docking (ISO)

Cellular Component

acrosomal vesicle (ISO)

actomyosin (ISO)

axon (ISO)

glutamatergic synapse (ISO)

integral component of plasma membrane (ISO)

integral component of presynaptic membrane (ISO)

integral component of synaptic vesicle membrane (ISO)

intracellular organelle (ISO)

membrane (ISO)

neuron projection (ISO)

nuclear membrane (ISO)

plasma membrane (ISO)

postsynaptic density (ISO)

presynaptic active zone membrane (ISO)

presynaptic membrane (ISO)

protein-containing complex (ISO)

secretory granule (ISO)

SNARE complex (ISO)

synaptic vesicle (ISO)

synaptic vesicle membrane (ISO)

synaptobrevin 2-SNAP-25-syntaxin-1a complex (ISO)

synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex (ISO)

synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex (ISO)

voltage-gated potassium channel complex (ISO)

Molecular Function

ATP-dependent protein binding (ISO)

calcium channel inhibitor activity (ISO)

calcium-dependent protein binding (ISO)

chloride channel inhibitor activity (ISO)

identical protein binding (ISO)

ion channel binding (ISO)

kinase binding (ISO)

myosin binding (ISO)

myosin head/neck binding (ISO)

protein binding (ISO)

protein domain specific binding (ISO)

protein N-terminus binding (ISO)

protein-containing complex binding (ISO)

protein-macromolecule adaptor activity (ISO)

SNARE binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

insulin secretion pathway (ISO)

References

References - curated


1.	Automated assignment of GO, PW and RDO ISS annotations to Chinchilla, Squirrel, Bonobo and/or Dog genes from Human gene annotations

Genomics

Comparative Map Data

Stx1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	14,030,226 - 14,046,456 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	14,030,233 - 14,046,456 (+)	NCBI	ChiLan1.0	ChiLan1.0

STX1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	7	73,699,206 - 73,719,672 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	7	73,699,210 - 73,719,673 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	7	73,113,535 - 73,134,032 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	7	73,113,540 - 73,133,999 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	72,751,476 - 72,771,924 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	7	72,558,190 - 72,578,613	NCBI
Celera	7	68,591,739 - 68,612,223 (-)	NCBI
Cytogenetic Map	7	q11.23	NCBI
HuRef	7	68,995,950 - 69,016,432 (-)	NCBI		HuRef
CHM1_1	7	73,259,272 - 73,279,754 (-)	NCBI		CHM1_1
CRA_TCAGchr7v2	7	72,446,607 - 72,467,089 (-)	NCBI

Stx1a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	135,051,473 - 135,079,954 (+)	NCBI	GRCm39		mm39
GRCm38	5	135,023,482 - 135,051,100 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	135,023,482 - 135,051,100 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	135,499,442 - 135,526,969 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	5	135,308,199 - 135,335,726 (+)	NCBI			mm8
Celera	5	132,033,901 - 132,061,428 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI

Stx1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	12	21,641,971 - 21,670,022 (-)	NCBI
Rnor_6.0 Ensembl	12	24,682,041 - 24,710,019 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	12	24,682,050 - 24,710,002 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	12	26,682,320 - 26,710,272 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	22,737,112 - 22,765,064 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
Celera	12	23,405,260 - 23,432,900 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

STX1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	7	80,852,495 - 80,871,635 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	80,852,495 - 80,862,255 (-)	Ensembl	panpan1.1		panPan2

STX1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	6	6,574,631 - 6,581,833 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	6	6,574,616 - 6,583,002 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Stx1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936543	2,909,560 - 2,918,175 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STX1A
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	9,347,495 - 9,367,948 (+)	NCBI
ChlSab1.1 Ensembl	28	9,347,532 - 9,368,585 (+)	Ensembl

Stx1a
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624740	14,104,033 - 14,120,133 (+)	NCBI

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005396766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005396768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005396769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01046632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01273107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCLAT00000008081 ⟹ ENSCLAP00000007961

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955456	14,030,226 - 14,046,456 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000008082 ⟹ ENSCLAP00000007962

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955456	14,037,004 - 14,045,431 (+)	Ensembl

RefSeq Acc Id:

XM_005396766 ⟹ XP_005396823

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955456	14,030,233 - 14,046,456 (+)	NCBI

Sequence:

show sequence

GTCGCGCATGCGGGGCTCGCTCGCTGCAGCCGGTACCGCTGCCACTCCCGGGAGCATGAAGGAC
CGAACCCAGGAGCTCCGCACGGCCAAGGACAGCGATGACGATGATGATGTCACTGTCCCCGTGG
ACCGAGACCGTTTCATGGATGAGTTCTTCGAGCAGGTGGAAGAGATCCGAGGCTTCATTGACAA
GATCGCAGAGAACGTGGAGGAGGTGAAGCGCAAGCACAGCGCCATCCTGGCCTCCCCCAACCCC
GATGAGAAGACCAAGGAGGAGCTGGAGGAACTCATGTCCGACATAAAGAAGACAGCGAACAAAG
TTCGTTCCAAGTTAAAGAGCATCGAGCAGAGCATTGAGCAGGAGGAAGGCCTGAACCGCTCCTC
TGCAGACCTGAGGATCCGAAAGACCCAGCACTCCACGCTGTCCCGGAAGTTTGTAGAGGTCATG
TCAGAGTACAATGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGC
TGGAGATCACTGGCAGGACCACAACCAGTGAGGAGTTGGAAGACATGCTGGAAAGTGGAAACCC
TGCCATCTTTGCCTCTGGGATCATCATGGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGATT
GAGACCCGGCACAGTGAGATCATCAAGCTGGAGAACAGCATCCGTGAGCTGCACGACATGTTCA
TGGACATGGCCATGCTGGTGGAGAGCCAGGGGGAGATGATTGACAGGATCGAGTACAACGTGGA
GCACGCGGTGGACTACGTGGAGCGGGCTGTGTCTGACACCAAGAAGGCCGTGAAGTACCAGAGC
AAGGCGCGCAGGAAGAAAATCATGATCATCATCTGCTGCGTGATCCTGGGCATTGTCATCGCTT
CCACCATCGGAGGCATCTTTGGATAGAGCCCCGCTTGCCACTTCCGTCCCGACGGCCACCCTGC
AGAGGCCCCTGGCTGCCGCTGCCTGGCTGGGTTGCCCTCCCCCTTTCTGGCTCGGACACCCTCA
CCCCCCTACCTGCCCTGCTTCTCTCCCCTCAGGGCCCCGTCTCCACCCTGCCCTGACCGTGTCG
TGTGCATGATCTGTGACAGTGTCTGTAGAGGCGGTGCATAGCAGGGCTGGGGACGGGTCCCTGC
AGGAAAGTCTTGGGCCCTGGTCCGGGCTACCCCACCCTCTCACTTGGGGTCCACCTTTCCTGGG
CTCCAGGCTCCTTCTGGACCCCAGCCATGCCCCGACCTGCCCCAGCCTTCCAGCTGTTCCCCAG
TGCCGAGCCCTGAAGGGTGGGGACCAGCTGGCCACATGGTGCTGCTTTTCAGGTTGGGGAGGGG
TGGCCCCGAGGGATAACCCAGCACTAAGCCTCTATTCGCTGACCACTGCCAGGAGGCTCGCTAC
CCTACCCGGAGCATAGCCAGCGGGTCCTGCCTCAGCCTCCCTCCCGCATCCTGAAGCCCCAGGA
GGCATCCTCTGGGCTGCGGTGCCTCTGCCTTCGGAGCTGGAGGCAGAGCAGCTGCCGTCCCCAA
AGGCCTGGCAGGTTGGAAAGCCAGTGTTGCATGTTCGGGACAGTGGTCCCCCTCTCCGGGAAGT
CAGATGTCTCAGGCCTGCAGTCTCATCCTGCCCTGCTGTCCCCCATTGATGTGCCACGTGGTGT
CAGGTGTCTCCGATGCGATGCAGTATTCAGCGGCCAGCCTTCCGGGCGCCCTTGAACCGCACCC
GCCCACGCCCCCTGTGGACAGGCGGGAGGTGCACGCAGGCGCATGCGGCAGGGGGCGGGGCCGT
GTGCGCGCCCCACCCTCCCTCGGCTTAGCTCCTGCCCAGTGACTGTGACCACTGTCCTTGCTGC
CTTCTCCCCCGCCCCTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
GTAGAATAAACATTTGTATATGTCTGA

hide sequence

RefSeq Acc Id:

XM_005396768 ⟹ XP_005396825

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955456	14,030,233 - 14,045,038 (+)	NCBI

Sequence:

show sequence

GTCGCGCATGCGGGGCTCGCTCGCTGCAGCCGGTACCGCTGCCACTCCCGGGAGCATGAAGGAC
CGAACCCAGGAGCTCCGCACGGCCAAGGACAGCGATGACGATGATGATGTCACTGTCCCCGTGG
ACCGAGACCGTTTCATGGATGAGTTCTTCGAGCAGGTGGAAGAGATCCGAGGCTTCATTGACAA
GATCGCAGAGAACGTGGAGGAGGTGAAGCGCAAGCACAGCGCCATCCTGGCCTCCCCCAACCCC
GATGAGAAGACCAAGGAGGAGCTGGAGGAACTCATGTCCGACATAAAGAAGACAGCGAACAAAG
TTCGTTCCAAGTTAAAGAGCATCGAGCAGAGCATTGAGCAGGAGGAAGGCCTGAACCGCTCCTC
TGCAGACCTGAGGATCCGAAAGACCCAGCACTCCACGCTGTCCCGGAAGTTTGTAGAGGTCATG
TCAGAGTACAATGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGC
TGGAGATCACTGGCAGGACCACAACCAGTGAGGAGTTGGAAGACATGCTGGAAAGTGGAAACCC
TGCCATCTTTGCCTCTGGGATCATCATGGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGATT
GAGACCCGGCACAGTGAGATCATCAAGCTGGAGAACAGCATCCGTGAGCTGCACGACATGTTCA
TGGACATGGCCATGCTGGTGGAGAGCCAGGAGAACCATGGGACCAGATCACGGTGCCCAAGAGA
ACTCTGGGGCTGCCAGAGGACCTTAAACAAGATGTTTGGGAAGGCTCAGCAAGGCCACCTTGAG
AGTGACAGCCAGGGAGCGCTCAGACTCCTGTTCCTGCCTCCCTCCTCGCACCAGGCCCGGGGCT
GAGCATCATCTGCATGGTCCCCACTTGGCTGAGACTGCATGGGTGCTTCCCTGAGGCCCTGCCC
CGAGCCTCCCCACCACGCGGAGGAGGGAGCTCTCTGGAGCTTGGGCGCCCCCGGCCCCGCAGGG
GGAGAT

hide sequence

RefSeq Acc Id:

XM_005396769 ⟹ XP_005396826

RefSeq Status:

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955456	14,030,233 - 14,045,135 (+)	NCBI

Sequence:

show sequence

GTCGCGCATGCGGGGCTCGCTCGCTGCAGCCGGTACCGCTGCCACTCCCGGGAGCATGAAGGAC
CGAACCCAGGAGCTCCGCACGGCCAAGGACAGCGATGACGATGATGATGTCACTGTCCCCGTGG
ACCGAGACCGTTTCATGGATGAGTTCTTCGAGCAGGTGGAAGAGATCCGAGGCTTCATTGACAA
GATCGCAGAGAACGTGGAGGAGGTGAAGCGCAAGCACAGCGCCATCCTGGCCTCCCCCAACCCC
GATGAGAAGACCAAGGAGGAGCTGGAGGAACTCATGTCCGACATAAAGAAGACAGCGAACAAAG
TTCGTTCCAAGTTAAAGAGCATCGAGCAGAGCATTGAGCAGGAGGAAGGCCTGAACCGCTCCTC
TGCAGACCTGAGGATCCGAAAGACCCAGCACTCCACGCTGTCCCGGAAGTTTGTAGAGGTCATG
TCAGAGTACAATGCCACGCAGTCCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGC
TGGAGATCACTGGCAGGACCACAACCAGTGAGGAGTTGGAAGACATGCTGGAAAGTGGAAACCC
TGCCATCTTTGCCTCTGGGATCATCATGGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGATT
GAGACCCGGCACAGTGAGATCATCAAGCTGGAGAACAGCATCCGTGAGCTGCACGACATGTTCA
TGGACATGGCCATGCTGGTGGAGAGCCAGGGTGCTTCCCTGAGGCCCTGCCCCGAGCCTCCCCA
CCACGCGGAGGAGGGAGCTCTCTGGAGCTTGGGCGCCCCCGGCCCCGCAGGGGGAGATGATTGA
CAGGATCGAGTACAACGTGGAGCACGCGGTGGACTACGTGGAGCGGGCTGTGTCTGACACCAAG
AAGGCCGTGAAGTACCAGAGCAAGGCG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005396823	(Get FASTA)	NCBI Sequence Viewer
	XP_005396825	(Get FASTA)	NCBI Sequence Viewer
	XP_005396826	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_005396823 ⟸ XM_005396766

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRGSLAAAGTAATPGSMKDRTQELRTAKDSDDDDDVTVPVDRDRFMDEFFEQVEEIRGFIDKIA
ENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSAD
LRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAI
FASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTIGGIFG

hide sequence

RefSeq Acc Id:

XP_005396826 ⟸ XM_005396769

- Peptide Label:

isoform X3

- Sequence:

show sequence

MRGSLAAAGTAATPGSMKDRTQELRTAKDSDDDDDVTVPVDRDRFMDEFFEQVEEIRGFIDKIA
ENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSAD
LRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAI
FASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGASLRPCPEPPHHA
EEGALWSLGAPGPAGGDD

hide sequence

RefSeq Acc Id:

XP_005396825 ⟸ XM_005396768

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRGSLAAAGTAATPGSMKDRTQELRTAKDSDDDDDVTVPVDRDRFMDEFFEQVEEIRGFIDKIA
ENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSAD
LRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAI
FASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQENHGTRSRCPRELW
GCQRTLNKMFGKAQQGHLESDSQGALRLLFLPPSSHQARG

hide sequence

RefSeq Acc Id:

ENSCLAP00000007961 ⟸ ENSCLAT00000008081

RefSeq Acc Id:

ENSCLAP00000007962 ⟸ ENSCLAT00000008082

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005586	Ensembl, ENTREZGENE
Ensembl Protein	ENSCLAP00000007961	ENTREZGENE
Ensembl Transcript	ENSCLAT00000008081	ENTREZGENE
NCBI Gene	Stx1a	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Stx1a	syntaxin 1A		syntaxin 1A (brain)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations