Ankib1 (ankyrin repeat and IBR domain containing 1) - Rat Genome Database

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Gene: Ankib1 (ankyrin repeat and IBR domain containing 1) Chinchilla lanigera
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Symbol: Ankib1
Name: ankyrin repeat and IBR domain containing 1
RGD ID: 8827730
Description: ASSOCIATED WITH Angiokeratoma Corporis Diffusum with Arteriovenous Fistulas (ortholog); cerebral cavernous malformation (ortholog); long QT syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ankyrin repeat and IBR domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554329,220,318 - 9,358,728 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References


Genomics

Comparative Map Data
Ankib1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554329,220,318 - 9,358,728 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBIChiLan1.0ChiLan1.0
ANKIB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl792,245,974 - 92,401,383 (+)EnsemblGRCh38hg38GRCh38
GRCh38792,245,974 - 92,401,383 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37791,875,288 - 92,030,697 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36791,713,484 - 91,868,634 (+)NCBINCBI36hg18NCBI36
Build 34791,520,198 - 91,673,298NCBI
Celera786,580,099 - 86,735,226 (+)NCBI
Cytogenetic Map7q21.2NCBI
HuRef786,483,537 - 86,639,103 (+)NCBIHuRef
CHM1_1791,805,584 - 91,960,744 (+)NCBICHM1_1
CRA_TCAGchr7v2791,204,781 - 91,359,905 (+)NCBI
Ankib1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3953,739,999 - 3,853,124 (-)NCBIGRCm39mm39
GRCm39 Ensembl53,740,000 - 3,852,925 (-)Ensembl
GRCm3853,689,999 - 3,803,124 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl53,690,000 - 3,802,925 (-)EnsemblGRCm38mm10GRCm38
MGSCv3753,690,000 - 3,803,109 (-)NCBIGRCm37mm9NCBIm37
MGSCv3653,696,006 - 3,808,931 (-)NCBImm8
Celera53,625,895 - 3,739,396 (-)NCBICelera
Cytogenetic Map5A1NCBI
Ankib1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2430,333,678 - 30,457,781 (+)NCBI
Rnor_6.0 Ensembl427,473,477 - 27,597,206 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0427,473,477 - 27,597,206 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0427,376,468 - 27,500,432 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4427,048,963 - 27,172,970 (+)NCBIRGSC3.4rn4RGSC3.4
Celera425,758,637 - 25,882,441 (+)NCBICelera
Cytogenetic Map4q13NCBI
ANKIB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1797,841,233 - 97,995,816 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl797,841,233 - 97,995,816 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0784,243,929 - 84,399,358 (+)NCBIMhudiblu_PPA_v0panPan3
ANKIB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11417,835,582 - 18,007,077 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1417,837,117 - 18,004,106 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1417,328,573 - 17,567,988 (+)NCBI
ROS_Cfam_1.01417,573,983 - 17,813,483 (+)NCBI
UMICH_Zoey_3.11417,732,244 - 17,974,376 (+)NCBI
UNSW_CanFamBas_1.01417,446,722 - 17,686,489 (+)NCBI
UU_Cfam_GSD_1.01417,720,644 - 17,959,856 (+)NCBI
Ankib1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511831,279,940 - 31,405,980 (+)NCBI
SpeTri2.0NW_0049368031,393,918 - 1,423,086 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKIB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl972,184,818 - 72,328,763 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1972,184,805 - 72,328,765 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2978,914,444 - 79,058,059 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANKIB1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12156,621,669 - 56,770,553 (-)NCBI
ChlSab1.1 Ensembl2156,624,114 - 56,718,920 (-)Ensembl
Vero_WHO_p1.0NW_02366604247,502,852 - 47,658,541 (+)NCBI
Ankib1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624809787,932 - 978,315 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000004382   ⟹   ENSCLAP00000004299
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554329,220,318 - 9,358,728 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000004383   ⟹   ENSCLAP00000004300
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554329,252,775 - 9,356,285 (+)Ensembl
RefSeq Acc Id: XM_005388006   ⟹   XP_005388063
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005388008   ⟹   XP_005388065
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005388009   ⟹   XP_005388066
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013515948   ⟹   XP_013371402
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,220,318 - 9,358,728 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005388063 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388065 (Get FASTA)   NCBI Sequence Viewer  
  XP_005388066 (Get FASTA)   NCBI Sequence Viewer  
  XP_013371402 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005388063   ⟸   XM_005388006
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005388065   ⟸   XM_005388008
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005388066   ⟸   XM_005388009
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013371402   ⟸   XM_013515948
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCLAP00000004300   ⟸   ENSCLAT00000004383
RefSeq Acc Id: ENSCLAP00000004299   ⟸   ENSCLAT00000004382


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003060 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000004300 ENTREZGENE
Ensembl Transcript ENSCLAT00000004383 ENTREZGENE
NCBI Gene Ankib1 ENTREZGENE