Znf367 (zinc finger protein 367) - Rat Genome Database

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Gene: Znf367 (zinc finger protein 367) Chinchilla lanigera
Analyze
Symbol: Znf367
Name: zinc finger protein 367
RGD ID: 8826879
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Colorectal Neoplasms (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542223,517,185 - 23,586,694 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542223,516,950 - 23,535,882 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (ISO)
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Znf367
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542223,517,185 - 23,586,694 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542223,516,950 - 23,535,882 (+)NCBIChiLan1.0ChiLan1.0
ZNF367
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38996,385,941 - 96,418,370 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl996,385,941 - 96,418,370 (-)EnsemblGRCh38hg38GRCh38
GRCh37999,148,223 - 99,180,652 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36998,190,057 - 98,220,490 (-)NCBINCBI36Build 36hg18NCBI36
Build 34996,229,790 - 96,260,224NCBI
Celera969,589,805 - 69,622,246 (-)NCBICelera
Cytogenetic Map9q22.32NCBI
HuRef968,759,229 - 68,791,683 (-)NCBIHuRef
CHM1_1999,294,704 - 99,327,151 (-)NCBICHM1_1
T2T-CHM13v2.09108,557,662 - 108,590,090 (-)NCBIT2T-CHM13v2.0
Zfp367
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391364,280,836 - 64,301,013 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1364,280,832 - 64,301,016 (-)EnsemblGRCm39 Ensembl
GRCm381364,133,022 - 64,153,199 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1364,133,018 - 64,153,202 (-)EnsemblGRCm38mm10GRCm38
MGSCv371364,234,365 - 64,254,507 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361364,142,279 - 64,162,421 (-)NCBIMGSCv36mm8
Celera1365,797,078 - 65,816,476 (-)NCBICelera
Cytogenetic Map13B3NCBI
cM Map1333.26NCBI
Zfp367
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr817970,896 - 990,025 (+)NCBIGRCr8
mRatBN7.217965,161 - 984,290 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl17965,161 - 984,287 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx17983,843 - 1,002,972 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0172,526,417 - 2,545,546 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.017981,263 - 1,000,392 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0171,652,892 - 1,672,021 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,652,895 - 1,672,021 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0171,642,448 - 1,661,577 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,492,142 - 6,511,271 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1176,492,141 - 6,511,268 (+)NCBI
Celera171,532,916 - 1,552,045 (-)NCBICelera
Cytogenetic Map17p14NCBI
ZNF367
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21143,029,405 - 43,064,704 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1943,031,864 - 43,067,081 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0967,483,257 - 67,515,630 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1995,605,845 - 95,638,721 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl995,608,140 - 95,638,326 (-)Ensemblpanpan1.1panPan2
ZNF367
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1170,461,631 - 70,485,380 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl170,461,776 - 70,483,053 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha171,224,694 - 71,248,368 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0170,762,423 - 70,786,132 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl170,762,438 - 70,786,211 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1170,574,079 - 70,597,756 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0170,337,374 - 70,361,043 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0171,048,280 - 71,072,183 (+)NCBIUU_Cfam_GSD_1.0
Znf367
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049446,117,474 - 6,130,994 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936487336,218 - 346,869 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936487333,952 - 347,465 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF367
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1025,707,722 - 25,735,067 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11025,707,711 - 25,735,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21030,034,258 - 30,043,140 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF367
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112106,712,962 - 106,743,351 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl12106,713,310 - 106,741,040 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603895,113,777 - 95,145,018 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf367
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475318,146,067 - 18,164,534 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475318,145,862 - 18,166,732 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013514307   ⟹   XP_013369761
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542223,516,950 - 23,535,882 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013369761 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000024493
  ENSCLAP00000024493.1
Reference Protein Sequences
RefSeq Acc Id: XP_013369761   ⟸   XM_013514307
- UniProtKB: A0A8C2WA72 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016816 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000024728 ENTREZGENE
  ENSCLAT00000024728.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene Znf367 ENTREZGENE
PANTHER KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 367 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8C2WA72 ENTREZGENE, UniProtKB/TrEMBL