Rasa1 (RAS p21 protein activator 1) - Rat Genome Database

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Gene: Rasa1 (RAS p21 protein activator 1) Chinchilla lanigera
Analyze
Symbol: Rasa1
Name: RAS p21 protein activator 1
RGD ID: 8823950
Description: ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); ion channel binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); blood vessel morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriovenous malformation (ortholog); basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nuclear membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ras GTPase-activating protein 1; RAS p21 protein activator (GTPase activating protein) 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541823,807,740 - 23,897,707 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541823,807,740 - 23,897,699 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References


Genomics

Comparative Map Data
Rasa1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541823,807,740 - 23,897,707 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541823,807,740 - 23,897,699 (-)NCBIChiLan1.0ChiLan1.0
RASA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl587,267,883 - 87,391,931 (+)EnsemblGRCh38hg38GRCh38
GRCh38587,267,845 - 87,391,916 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37586,563,700 - 86,687,733 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36586,599,907 - 86,723,489 (+)NCBINCBI36hg18NCBI36
Build 34586,600,521 - 86,723,488NCBI
Celera582,456,373 - 82,579,983 (+)NCBI
Cytogenetic Map5q14.3NCBI
HuRef581,768,403 - 81,891,908 (+)NCBIHuRef
CHM1_1585,997,132 - 86,120,771 (+)NCBICHM1_1
Rasa1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391385,362,818 - 85,437,605 (-)NCBIGRCm39mm39
GRCm39 Ensembl1385,362,899 - 85,437,249 (-)Ensembl
GRCm381385,214,699 - 85,289,486 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1385,214,780 - 85,289,130 (-)EnsemblGRCm38mm10GRCm38
MGSCv371385,354,304 - 85,429,091 (-)NCBIGRCm37mm9NCBIm37
MGSCv361385,689,136 - 85,729,574 (-)NCBImm8
Celera1387,446,946 - 87,523,497 (-)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1345.05NCBI
Rasa1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2215,857,704 - 15,940,757 (-)NCBI
Rnor_6.0 Ensembl213,616,822 - 13,696,426 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0213,617,021 - 13,696,531 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0213,470,580 - 13,551,782 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4214,203,815 - 14,287,824 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1214,124,183 - 14,208,193 (-)NCBI
Celera212,124,725 - 12,204,755 (-)NCBICelera
Cytogenetic Map2q11NCBI
RASA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1528,115,159 - 28,239,854 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl528,115,159 - 28,240,321 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0527,980,907 - 28,104,368 (-)NCBIMhudiblu_PPA_v0panPan3
RASA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1321,068,182 - 21,177,288 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl321,054,930 - 21,176,757 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha322,433,878 - 22,542,367 (-)NCBI
ROS_Cfam_1.0320,976,854 - 21,085,576 (-)NCBI
UMICH_Zoey_3.1320,947,976 - 21,056,165 (-)NCBI
UNSW_CanFamBas_1.0320,910,527 - 21,018,703 (-)NCBI
UU_Cfam_GSD_1.0321,202,248 - 21,310,549 (-)NCBI
Rasa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213176,687,034 - 176,786,016 (-)NCBI
SpeTri2.0NW_0049364695,839,560 - 5,933,049 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl294,878,911 - 94,993,479 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1294,879,615 - 94,992,725 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2297,399,815 - 97,512,972 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASA1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1481,249,851 - 81,371,486 (+)NCBI
ChlSab1.1 Ensembl481,249,805 - 81,370,453 (+)Ensembl
Vero_WHO_p1.0NW_02366604930,268,183 - 30,393,793 (+)NCBI
Rasa1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247436,750,476 - 6,882,556 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005899   ⟹   ENSCLAP00000005798
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541823,807,740 - 23,897,707 (-)Ensembl
RefSeq Acc Id: XM_005382300   ⟹   XP_005382357
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541823,807,740 - 23,897,699 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005382357 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005382357   ⟸   XM_005382300
- Sequence:
RefSeq Acc Id: ENSCLAP00000005798   ⟸   ENSCLAT00000005899


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004110 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000005798 ENTREZGENE
Ensembl Transcript ENSCLAT00000005899 ENTREZGENE
NCBI Gene Rasa1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Rasa1  RAS p21 protein activator 1    RAS p21 protein activator (GTPase activating protein) 1  Symbol and/or name change 5135510 APPROVED