Scyl3 (SCY1 like pseudokinase 3) - Rat Genome Database

Name: Scyl3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Scyl3 (SCY1 like pseudokinase 3) Chinchilla lanigera

Analyze

Symbol:

Scyl3

Name:

SCY1 like pseudokinase 3

RGD ID:

8821036

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN inflammatory response (ortholog); neuron development (ortholog); protein localization (ortholog); ASSOCIATED WITH 1q24 Deletion Syndrome (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protein-associating with the carboxyl-terminal domain of ezrin; SCY1-like 3; SCY1-like, kinase-like 3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	7,448,893 - 7,476,840 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	7,443,841 - 7,477,596 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

1q24 Deletion Syndrome (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

inflammatory response (ISO)

neuron development (ISO)

protein localization (ISO)

spinal cord motor neuron differentiation (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

endoplasmic reticulum (ISO)

Golgi apparatus (ISO)

Golgi membrane (ISO)

lamellipodium (ISO)

Molecular Function

identical protein binding (ISO)

kinase activity (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Scyl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	7,448,893 - 7,476,840 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	7,443,841 - 7,477,596 (+)	NCBI	ChiLan1.0	ChiLan1.0

SCYL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	169,849,631 - 169,894,268 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	169,849,631 - 169,894,267 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	169,818,772 - 169,863,037 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	168,088,854 - 168,129,661 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	142,931,586 - 142,972,865 (-)	NCBI		Celera
Cytogenetic Map	1	q24.2	NCBI
HuRef	1	141,044,727 - 141,085,609 (-)	NCBI		HuRef
CHM1_1	1	171,244,369 - 171,285,280 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	169,205,381 - 169,249,993 (-)	NCBI		T2T-CHM13v2.0

Scyl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	163,756,669 - 163,782,695 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	163,756,669 - 163,782,695 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	163,929,100 - 163,955,126 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	163,929,100 - 163,955,126 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	165,860,195 - 165,885,257 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	165,766,739 - 165,791,801 (+)	NCBI		MGSCv36	mm8
Celera	1	166,370,534 - 166,395,607 (+)	NCBI		Celera
Cytogenetic Map	1	H2.1- H2.2	NCBI
cM Map	1	71.23	NCBI

Scyl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	78,811,595 - 78,836,202 (+)	NCBI		GRCr8
mRatBN7.2	13	76,278,428 - 76,303,038 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	76,278,428 - 76,301,716 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	78,896,495 - 78,919,783 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	80,200,830 - 80,224,120 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	77,455,414 - 77,478,704 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	82,230,938 - 82,255,640 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	82,231,030 - 82,254,318 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	87,103,921 - 87,128,610 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	79,687,546 - 79,710,834 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	79,704,000 - 79,724,634 (+)	NCBI
Celera	13	76,012,137 - 76,035,426 (+)	NCBI		Celera
Cytogenetic Map	13	q23	NCBI

SCYL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	79,855,292 - 79,912,359 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	79,541,059 - 79,584,939 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	145,299,266 - 145,383,511 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	149,056,553 - 149,100,201 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	149,057,194 - 149,095,445 (-)	Ensembl	panpan1.1		panPan2

SCYL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	28,751,604 - 28,796,042 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	28,751,707 - 28,795,756 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	28,283,039 - 28,327,661 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	28,553,281 - 28,597,911 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	28,553,472 - 28,597,906 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	28,401,988 - 28,446,611 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	28,437,213 - 28,481,830 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	28,673,927 - 28,718,589 (+)	NCBI		UU_Cfam_GSD_1.0

Scyl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	98,949,491 - 98,982,060 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	16,800,286 - 16,828,194 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	16,796,044 - 16,828,809 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SCYL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	81,134,352 - 81,175,536 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	81,134,035 - 81,175,537 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	88,760,885 - 88,802,370 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SCYL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	59,157,208 - 59,215,074 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	59,156,992 - 59,198,614 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	60,812,493 - 60,873,673 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Scyl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624826	7,749,332 - 7,779,145 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624826	7,748,995 - 7,783,157 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005398176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005398181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01049305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01279049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000009718 ⟹ ENSCLAP00000009589

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955462	7,448,893 - 7,476,840 (+)	Ensembl

RefSeq Acc Id:

ENSCLAT00000009719 ⟹ ENSCLAP00000009590

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955462	7,448,893 - 7,476,840 (+)	Ensembl

RefSeq Acc Id:

XM_005398176 ⟹ XP_005398233

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	7,443,841 - 7,477,432 (+)	NCBI

Sequence:

show sequence

ATTTCCGGGCCGTCTCCTCGGAGTCCGAGCGGCCCGGCCCGGGTGAGGTTGTAGGTGTTGTGGC
CGCTGGCTTAGGGGAGGCGAAGGGGCGCGAGCCCAGGAGACGCTCTGACCTCCCCGCTGCCCGC
AGGTCTGTTTGCTTTGAGGAGGAGCTGAAGACTGCCCCACGGCATAAGGGATGGGATCAGAGAA
TAGTGCTTTAAAGAGCTATACACTGAAAGAACCACCATTTACTTTACCCGCTGGACTTGCTGTT
TATCCTGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTTTGTGTATAAGAGAGAAAATGAAG
ACAAAGTTAATAAAGCTGCCAAGCACTTGAAGACCCTTCGTCACCCTTGCTTGCTAAGATTTTT
ATCTTGTACTGTGGAACCAGACGGCATTCACCTTGTCACTGAGCGAGTGCAGCCTCTGGAAGTG
GCCTTGGAAACGCTGTCTGCCGCAGAGGTCTGTGCTGGCATTTATGACATACTGCTGGCACTGG
TCTTCCTTCACGACAGGGGACACCTAACACACAACAATGTCTGCTTAGCCTCTGTGTTTGTGAG
TGAAGATGGGCACTGGAAGCTAGGAGGAATGGAGACTGTTTGTAAAGTGTCTCAGGCCACGCCA
GAGTTTCTGAAGAATATTCGGTCAGTTCGAGACGCAGCGTCTGTCCCTCCTGAAGAGATGTCTC
CAGAATTCACAACTCTTCCAGAGTCTCATGGACATGCTCGGGATGCCTATTCCTTTGGAACATT
GGTGGAAAGCTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAG
CAGACCTTGCACACAGCCCTGCTGAATCCCACTCCACACTGTCGGCCCGCGCTCCGCACCTTAC
TGTCCCATGACTTCTTCAGAAATGATTTTCTAGAAATTGTGAATTTCTTGAAAAGCTTAACACT
GAAGAGTGAAGAGGAAAAAACTGAATTCTTCAAATTTCTGCTGGACAGAGTCAGCTGCTTGTCC
GAGGAGTTAATAGCGTCGAGGCTGGTGCCACTTCTGCTTAATCAGTTGGTGTTTGCAGAGCCAG
TAGCTGTTAAGAGTTTTCTTCCTCATCTGCTTGGCCCCAAAAAAGACAAAGAACAAGGAGAAAC
CTGTTGCCTGCTCTCGCCGGCCTTGTTCCAGTTGCGGGTGATCCCTGTGCTCCTCCAGTTGTTT
GAGGTTCACGAGGAACATGTGCGGATGGTGCTCCTGTCTCACATTGAGGCCTACGTGGAGCACT
TTACTCAGGAGCAGCTGAAAAAAGTCATTTTGCCACAGGTGTTACTGGGCCTGCGTGATACCAG
CAGTTCCATTGTGGCAGTTACTCTTCATAGCCTTGCAGTGCTGGTCTCTCTGCTTGGACCAGAA
GTGGTTGTGGGAGGACAGAGAACCAAGATCTTTAAACGTACTGCCCCGAGTTTTACTAAAATGA
CTGATCTTTCCCCAGAAGATTCTCCCAGGCATGTGGTCTGCAGCCGGAACAGTCAGATCTTGCC
CACCTTGGAGAGTGCCTCCTCTAGCACATTCCCAAAAGGTTTCTCTTCTGGCACCCTCCCCATC
AACAGCAAGGAGCACATACAGCGAGATTACTACAGTACCTGTTTATACACAGGTGACCAGTTTT
CTCAGTCTATTAAGTTTCCCATGAATGGAATCTCAGATGTGAAAAATACTTCAGGGAACACTGA
AAATTTCTCATCAGACTCTAAAAAGTCTGAGGAGTGGCCTGACTGGACTGAGCCTGAGGAGCCA
GAGAACCAAACTGTCAGCGTGCACATTTGGCCTACAGAACCCTGTGATGCTGCCGAGTCCCAGT
GCACTGACCTCATTGCAGAAGCAGTGGCCTGGGAAGCCTGTGCACCCAGCAGCTTAGGTACTCA
AACAAGCCTAGGACCCAGTGTCTCTGTGCCAGTGCCTCATACCTCTGGGGAGCAGAAGCCCACT
CTTGCTTTGCATCCACTCACTGAACCAGCCATGCCTCTGAAATCAACTCTCCTCCCAAATGTAC
AAAGCAGAGAAGAGCCAGACCAGACCAAGCCACCAAAAGGGCTGTCACAAGAAAGGCCTCTTAA
AGTTCAGTCAGAACTTGGTTTGGGAGAAGAGTTTACCATAACGGTTAAAAAGAAGCCAATAGAA
GATCCTGAGTTGGACTGGTTTGCTGATATGATCCCAGAAATAAAGCCTTCAGCTGCTTTTCTTA
TTTTACCTGAACTGAGAACAGAAATGATGGTCCCCAGCAAGGATGGTGTCTCTCCAGTGATGCA
GTTTTCCTCAAAATTTGCTGCAGCAGAAATGACTGAGGGAGAGGCTGAAGGCTGGGGAGAAGAA
GGGGAGCTGAACTGGGAAGATAGTAACTGGTGACAATGGACGTGAGTTAAACTTTAGGAAGGAA
TCCTTTTTTAAAAAAATGAGTACCTCAGATGCAGGCTGTATGGACAAAAAAACCCCAAAGCAGC
CTCTTTTCCCTGTCCCAGGGGCTCTTTTCCAGTCTGTGCCAACTGCAGGGTGAGATGATGCTCG
AGTGCTGGCTGAGCCCAGGTGGCCAAGGGCTCACAGGGCTGGCTTCTAGGAGGGCAAGCCTGGG
TGCATTCAGCAGAGGCCAGTCCACGAAGAGCAAGAAGCTGAGGAAAGGTCGATTTACTGCTTTA
AAAAAGCAAGAAAATAAATATAAAAAGTCAAGCTGTTTAGCTTAATTTTGTGCCATTTCTTTAA
CGGTAAGAAAAATAAGTTCTATTATGTAATACAACTTACTAAAAAAAATTAGCTATAAATTATA
AATGACTTAAGGTTTCCTTAGGCAGCTTATTTATTTGTTTACAGTTGTACTTTCTGAGTGGAAG
GTCCTCTGTGGACCTGGGCAGTTACTGTTTTACATGTACTACCTTGTACCAAAGGTCTTAATGA
GAAATATCACCCCCAATCCTGTTCTCTAAATGTCAAATAAAGACTATTTTCACTAGA

hide sequence

RefSeq Acc Id:

XM_005398178 ⟹ XP_005398235

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	7,443,980 - 7,477,432 (+)	NCBI

Sequence:

show sequence

TCGGGAAGGGCTGGCCGGAGGTCCGCACGGCGAGGGTGTCCTCGGTCAGGGCCGGGAGGCCTTG
GTCGGCTCCGGGGCCCTGCGGCTGCGGTCTGCGCGCGATGCTTTACGTTTTGGATAAAGAGGAG
ATGCCGGACGGAGGTTGCTGGGGGTTGTTGCTCCCGTTGAAGTCACGCTTGGTTCCTGTGGCCC
TAAAGAGTCATCAGGAAGCATCGCTTGTCAGCCTGCGATGCTGACGGAGCTCAGCGCGGGACAC
GGACGGACACAGACAGGGGTCCCTGCGCCGGAGACCCCGACCACCCCACGAAGTGGAGCGGGAC
CCGCACCTGCTCGACCTGGAGAATTAAGTTGCAGGCTCCCTGACTCTCATCACGGAAATAGAGA
GTGGTTTGCAGGACTGGTCAATAAGAGGCATGGGGAGGGTTTCTAGGGAGAAACTTAAGCCGCG
CACTGCAGAGTGGAGTGTGGGTGTTCGGAGAATGAGGCGCCTTCCGGTCCGTGGCTGGGTGGTG
TCGCCCCAATGGGTGATCGAGGATGCGTGTTCCTACTGTCTGTCCTCCCAGCCTAGTGAGAATG
CAAACCACTTACATGTGTTTAAAATTGAGACCCGCTGCCCACTATTACTACTGCTCCCTTGAGG
GTGGAGGTCAGCGGGAGGACGCACAATGTATAGGTGGAAAGAGTTGGTTTAATCACAGGCGAAA
AAGGCTAATTTGCGGTTAAAGCGAGTTGCCCAGCCTTCTCGTCTCTGAGAGAGAAATTTAAACA
GGGCTTGTGTAGCTCCGGCAATTCCCGGAGCTGTAGTCCTTAAAAATACAGTTTTAAAATTCTG
ATTTTCCTTGCCTCCGTTTTACCTGTCTTTATTTCATCTGTTCTACCTCAGCACCTGAACCAGA
TCAAAGCAGAGACGAGGGGTGATGTAATCAGTAGACTCCAAAGCAGCCTTCAGGGCCCTTCCTA
TTGGAACTTCCCAGCTAGAGGAGCAAGGCAGGCTCACAACTTGCTGAGAAGTGAACAGAGAGAA
ATAGATCCTTGGAGAACACAGGTTTCTTAGTTTGGCAGGGATGTAGCCCAGGGCCCTCCCATTG
TACCGGTGGCCAGTCCGGAAACATCAGGATGCTGCCTAAAGAGGCAAACGGGAGGGAGCGAGAT
CAACGAGGATGTATTTATTTTGGATTTTTGAGACAGAGCCACACTGTGTAGCCCAGGCTGGCTT
AGAACTCTCAGCCATCCTGCCTCAGCCTCCCAGGTGCTAGGATTACAGGTGTGTGACACCAGAC
CCAGAAGAGACATTCGACCTAACACTTGATTATAGAGCAGAGGTGATAAATTCTGCAAAACGTC
TGTGCTCTGATGTTAGAATAACATTTGCTACTTTCCTGTGACTTAGTTTCACAGCCGAGAAGCG
GGATTTTGTGTTTTCTCCCCTCCTCAAAACAAGAGACCACATTTTGGGGTCCTAGTGTTACTTA
CATGTCTTACATTTTCGGAAGTTCATTTTAGCGGAATTATTTTTAAAACACTGTTTGTAGTATT
TGTGCCGCTTGGATTGAATGCAGTTGTGTGAAGAATTAGAATTACTACTTGCAGCTAGTCTCAA
ATTGTAATAACCCCACACCTTTTTATTTTACCTTAGGAAATTTGCCCTAGGCGGGGAATGTAAC
CCGCTGCTCCCTCGGCCTGCACTGGTGGTCAGTAGACTTCTGTCAGTGCTTTCAGCATGGTCTG
TTTGCTTTGAGGAGGAGCTGAAGACTGCCCCACGGCATAAGGGATGGGATCAGAGAATAGTGCT
TTAAAGAGCTATACACTGAAAGAACCACCATTTACTTTACCCGCTGGACTTGCTGTTTATCCTG
CTGTACTGCAAGATGGCAAATTTGCTTCAGTTTTTGTGTATAAGAGAGAAAATGAAGACAAAGT
TAATAAAGCTGCCAAGCACTTGAAGACCCTTCGTCACCCTTGCTTGCTAAGATTTTTATCTTGT
ACTGTGGAACCAGACGGCATTCACCTTGTCACTGAGCGAGTGCAGCCTCTGGAAGTGGCCTTGG
AAACGCTGTCTGCCGCAGAGGTCTGTGCTGGCATTTATGACATACTGCTGGCACTGGTCTTCCT
TCACGACAGGGGACACCTAACACACAACAATGTCTGCTTAGCCTCTGTGTTTGTGAGTGAAGAT
GGGCACTGGAAGCTAGGAGGAATGGAGACTGTTTGTAAAGTGTCTCAGGCCACGCCAGAGTTTC
TGAAGAATATTCGGTCAGTTCGAGACGCAGCGTCTGTCCCTCCTGAAGAGATGTCTCCAGAATT
CACAACTCTTCCAGAGTCTCATGGACATGCTCGGGATGCCTATTCCTTTGGAACATTGGTGGAA
AGCTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAGCAGACCT
TGCACACAGCCCTGCTGAATCCCACTCCACACTGTCGGCCCGCGCTCCGCACCTTACTGTCCCA
TGACTTCTTCAGAAATGATTTTCTAGAAATTGTGAATTTCTTGAAAAGCTTAACACTGAAGAGT
GAAGAGGAAAAAACTGAATTCTTCAAATTTCTGCTGGACAGAGTCAGCTGCTTGTCCGAGGAGT
TAATAGCGTCGAGGCTGGTGCCACTTCTGCTTAATCAGTTGGTGTTTGCAGAGCCAGTAGCTGT
TAAGAGTTTTCTTCCTCATCTGCTTGGCCCCAAAAAAGACAAAGAACAAGGAGAAACCTGTTGC
CTGCTCTCGCCGGCCTTGTTCCAGTTGCGGGTGATCCCTGTGCTCCTCCAGTTGTTTGAGGTTC
ACGAGGAACATGTGCGGATGGTGCTCCTGTCTCACATTGAGGCCTACGTGGAGCACTTTACTCA
GGAGCAGCTGAAAAAAGTCATTTTGCCACAGGTGTTACTGGGCCTGCGTGATACCAGCAGTTCC
ATTGTGGCAGTTACTCTTCATAGCCTTGCAGTGCTGGTCTCTCTGCTTGGACCAGAAGTGGTTG
TGGGAGGACAGAGAACCAAGATCTTTAAACGTACTGCCCCGAGTTTTACTAAAATGACTGATCT
TTCCCCAGAAGATTCTCCCAGGCATGTGGTCTGCAGCCGGAACAGTCAGATCTTGCCCACCTTG
GAGAGTGCCTCCTCTAGCACATTCCCAAAAGGTTTCTCTTCTGGCACCCTCCCCATCAACAGCA
AGGAGCACATACAGCGAGATTACTACAGTACCTGTTTATACACAGGTGACCAGTTTTCTCAGTC
TATTAAGTTTCCCATGAATGGAATCTCAGATGTGAAAAATACTTCAGGGAACACTGAAAATTTC
TCATCAGACTCTAAAAAGTCTGAGGAGTGGCCTGACTGGACTGAGCCTGAGGAGCCAGAGAACC
AAACTGTCAGCGTGCACATTTGGCCTACAGAACCCTGTGATGCTGCCGAGTCCCAGTGCACTGA
CCTCATTGCAGAAGCAGTGGCCTGGGAAGCCTGTGCACCCAGCAGCTTAGGTACTCAAACAAGC
CTAGGACCCAGTGTCTCTGTGCCAGTGCCTCATACCTCTGGGGAGCAGAAGCCCACTCTTGCTT
TGCATCCACTCACTGAACCAGCCATGCCTCTGAAATCAACTCTCCTCCCAAATGTACAAAGCAG
AGAAGAGCCAGACCAGACCAAGCCACCAAAAGGGCTGTCACAAGAAAGGCCTCTTAAAGTTCAG
TCAGAACTTGGTTTGGGAGAAGAGTTTACCATAACGGTTAAAAAGAAGCCAATAGAAGATCCTG
AGTTGGACTGGTTTGCTGATATGATCCCAGAAATAAAGCCTTCAGCTGCTTTTCTTATTTTACC
TGAACTGAGAACAGAAATGATGGTCCCCAGCAAGGATGGTGTCTCTCCAGTGATGCAGTTTTCC
TCAAAATTTGCTGCAGCAGAAATGACTGAGGGAGAGGCTGAAGGCTGGGGAGAAGAAGGGGAGC
TGAACTGGGAAGATAGTAACTGGTGACAATGGACGTGAGTTAAACTTTAGGAAGGAATCCTTTT
TTAAAAAAATGAGTACCTCAGATGCAGGCTGTATGGACAAAAAAACCCCAAAGCAGCCTCTTTT
CCCTGTCCCAGGGGCTCTTTTCCAGTCTGTGCCAACTGCAGGGTGAGATGATGCTCGAGTGCTG
GCTGAGCCCAGGTGGCCAAGGGCTCACAGGGCTGGCTTCTAGGAGGGCAAGCCTGGGTGCATTC
AGCAGAGGCCAGTCCACGAAGAGCAAGAAGCTGAGGAAAGGTCGATTTACTGCTTTAAAAAAGC
AAGAAAATAAATATAAAAAGTCAAGCTGTTTAGCTTAATTTTGTGCCATTTCTTTAACGGTAAG
AAAAATAAGTTCTATTATGTAATACAACTTACTAAAAAAAATTAGCTATAAATTATAAATGACT
TAAGGTTTCCTTAGGCAGCTTATTTATTTGTTTACAGTTGTACTTTCTGAGTGGAAGGTCCTCT
GTGGACCTGGGCAGTTACTGTTTTACATGTACTACCTTGTACCAAAGGTCTTAATGAGAAATAT
CACCCCCAATCCTGTTCTCTAAATGTCAAATAAAGACTATTTTCACTAGA

hide sequence

RefSeq Acc Id:

XM_005398179 ⟹ XP_005398236

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	7,445,811 - 7,477,432 (+)	NCBI

Sequence:

show sequence

AGTTTCACCAGTTTTAACTTCTTCCTAATGCTTTTGTAACTAACTGTTAATTCTGACGTAGTGG
TATTCATAATTTTGAATCACGGGTTAATAGATATTGTAAGGCTCAGTATTCCCACGAGGAATAT
TTTGCTGTTTAGAAATAACTAAGGTAATTAAATGTGTGTTCCTGTGATGTGGACTTCCTGCCAC
TTACCTGGCCAGAACCCTTTCCCTGAGCCCGCCTCTCTTTGGGGGCCGATACTGGAAATAAGCA
GACAGCTGATTCCCTGCTTGCAGTTCCTTATTTTCAGTTCTCCCCTTACGGTGTGTTGATTTTG
AGAGGCTATGTTTTGTGACTGAGAAGGTGGTTAGGCTAGCTTCAGAGAAATACTTTTCCCTGTA
ACTCATTCCTCTAGTCTGACTGGTTTTTCAGGAAGGGGTTAAAGAAAAGTTTTTTCTGCTTCTG
AAGTGGCAGTTGGTGGCGAAGAACTGGGACCCCCTGAAGTTGCCTCAGGGAAAGGAGCTGATGG
TCTGTTTGCTTTGAGGAGGAGCTGAAGACTGCCCCACGGCATAAGGGATGGGATCAGAGAATAG
TGCTTTAAAGAGCTATACACTGAAAGAACCACCATTTACTTTACCCGCTGGACTTGCTGTTTAT
CCTGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTTTGTGTATAAGAGAGAAAATGAAGACA
AAGTTAATAAAGCTGCCAAGCACTTGAAGACCCTTCGTCACCCTTGCTTGCTAAGATTTTTATC
TTGTACTGTGGAACCAGACGGCATTCACCTTGTCACTGAGCGAGTGCAGCCTCTGGAAGTGGCC
TTGGAAACGCTGTCTGCCGCAGAGGTCTGTGCTGGCATTTATGACATACTGCTGGCACTGGTCT
TCCTTCACGACAGGGGACACCTAACACACAACAATGTCTGCTTAGCCTCTGTGTTTGTGAGTGA
AGATGGGCACTGGAAGCTAGGAGGAATGGAGACTGTTTGTAAAGTGTCTCAGGCCACGCCAGAG
TTTCTGAAGAATATTCGGTCAGTTCGAGACGCAGCGTCTGTCCCTCCTGAAGAGATGTCTCCAG
AATTCACAACTCTTCCAGAGTCTCATGGACATGCTCGGGATGCCTATTCCTTTGGAACATTGGT
GGAAAGCTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAGCAG
ACCTTGCACACAGCCCTGCTGAATCCCACTCCACACTGTCGGCCCGCGCTCCGCACCTTACTGT
CCCATGACTTCTTCAGAAATGATTTTCTAGAAATTGTGAATTTCTTGAAAAGCTTAACACTGAA
GAGTGAAGAGGAAAAAACTGAATTCTTCAAATTTCTGCTGGACAGAGTCAGCTGCTTGTCCGAG
GAGTTAATAGCGTCGAGGCTGGTGCCACTTCTGCTTAATCAGTTGGTGTTTGCAGAGCCAGTAG
CTGTTAAGAGTTTTCTTCCTCATCTGCTTGGCCCCAAAAAAGACAAAGAACAAGGAGAAACCTG
TTGCCTGCTCTCGCCGGCCTTGTTCCAGTTGCGGGTGATCCCTGTGCTCCTCCAGTTGTTTGAG
GTTCACGAGGAACATGTGCGGATGGTGCTCCTGTCTCACATTGAGGCCTACGTGGAGCACTTTA
CTCAGGAGCAGCTGAAAAAAGTCATTTTGCCACAGGTGTTACTGGGCCTGCGTGATACCAGCAG
TTCCATTGTGGCAGTTACTCTTCATAGCCTTGCAGTGCTGGTCTCTCTGCTTGGACCAGAAGTG
GTTGTGGGAGGACAGAGAACCAAGATCTTTAAACGTACTGCCCCGAGTTTTACTAAAATGACTG
ATCTTTCCCCAGAAGATTCTCCCAGGCATGTGGTCTGCAGCCGGAACAGTCAGATCTTGCCCAC
CTTGGAGAGTGCCTCCTCTAGCACATTCCCAAAAGGTTTCTCTTCTGGCACCCTCCCCATCAAC
AGCAAGGAGCACATACAGCGAGATTACTACAGTACCTGTTTATACACAGGTGACCAGTTTTCTC
AGTCTATTAAGTTTCCCATGAATGGAATCTCAGATGTGAAAAATACTTCAGGGAACACTGAAAA
TTTCTCATCAGACTCTAAAAAGTCTGAGGAGTGGCCTGACTGGACTGAGCCTGAGGAGCCAGAG
AACCAAACTGTCAGCGTGCACATTTGGCCTACAGAACCCTGTGATGCTGCCGAGTCCCAGTGCA
CTGACCTCATTGCAGAAGCAGTGGCCTGGGAAGCCTGTGCACCCAGCAGCTTAGGTACTCAAAC
AAGCCTAGGACCCAGTGTCTCTGTGCCAGTGCCTCATACCTCTGGGGAGCAGAAGCCCACTCTT
GCTTTGCATCCACTCACTGAACCAGCCATGCCTCTGAAATCAACTCTCCTCCCAAATGTACAAA
GCAGAGAAGAGCCAGACCAGACCAAGCCACCAAAAGGGCTGTCACAAGAAAGGCCTCTTAAAGT
TCAGTCAGAACTTGGTTTGGGAGAAGAGTTTACCATAACGGTTAAAAAGAAGCCAATAGAAGAT
CCTGAGTTGGACTGGTTTGCTGATATGATCCCAGAAATAAAGCCTTCAGCTGCTTTTCTTATTT
TACCTGAACTGAGAACAGAAATGATGGTCCCCAGCAAGGATGGTGTCTCTCCAGTGATGCAGTT
TTCCTCAAAATTTGCTGCAGCAGAAATGACTGAGGGAGAGGCTGAAGGCTGGGGAGAAGAAGGG
GAGCTGAACTGGGAAGATAGTAACTGGTGACAATGGACGTGAGTTAAACTTTAGGAAGGAATCC
TTTTTTAAAAAAATGAGTACCTCAGATGCAGGCTGTATGGACAAAAAAACCCCAAAGCAGCCTC
TTTTCCCTGTCCCAGGGGCTCTTTTCCAGTCTGTGCCAACTGCAGGGTGAGATGATGCTCGAGT
GCTGGCTGAGCCCAGGTGGCCAAGGGCTCACAGGGCTGGCTTCTAGGAGGGCAAGCCTGGGTGC
ATTCAGCAGAGGCCAGTCCACGAAGAGCAAGAAGCTGAGGAAAGGTCGATTTACTGCTTTAAAA
AAGCAAGAAAATAAATATAAAAAGTCAAGCTGTTTAGCTTAATTTTGTGCCATTTCTTTAACGG
TAAGAAAAATAAGTTCTATTATGTAATACAACTTACTAAAAAAAATTAGCTATAAATTATAAAT
GACTTAAGGTTTCCTTAGGCAGCTTATTTATTTGTTTACAGTTGTACTTTCTGAGTGGAAGGTC
CTCTGTGGACCTGGGCAGTTACTGTTTTACATGTACTACCTTGTACCAAAGGTCTTAATGAGAA
ATATCACCCCCAATCCTGTTCTCTAAATGTCAAATAAAGACTATTTTCACTAGA

hide sequence

RefSeq Acc Id:

XM_005398180 ⟹ XP_005398237

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	7,443,841 - 7,477,596 (+)	NCBI

Sequence:

show sequence

ATTTCCGGGCCGTCTCCTCGGAGTCCGAGCGGCCCGGCCCGGGTGAGGTTGTAGGTGTTGTGGC
CGCTGGCTTAGGGGAGGCGAAGGGGCGCGAGCCCAGGAGACGCTCTGACCTCCCCGCTGCCCGC
AGGTCTGTTTGCTTTGAGGAGGAGCTGAAGACTGCCCCACGGCATAAGGGATGGGATCAGAGAA
TAGTGCTTTAAAGAGCTATACACTGAAAGAACCACCATTTACTTTACCCGCTGGACTTGCTGTT
TATCCTGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTTTGTGTATAAGAGAGAAAATGAAG
ACAAAGTTAATAAAGCTGCCAAGCACTTGAAGACCCTTCGTCACCCTTGCTTGCTAAGATTTTT
ATCTTGTACTGTGGAACCAGACGGCATTCACCTTGTCACTGAGCGAGTGCAGCCTCTGGAAGTG
GCCTTGGAAACGCTGTCTGCCGCAGAGGTCTGTGCTGGCATTTATGACATACTGCTGGCACTGG
TCTTCCTTCACGACAGGGGACACCTAACACACAACAATGTCTGCTTAGCCTCTGTGTTTGTGAG
TGAAGATGGGCACTGGAAGCTAGGAGGAATGGAGACTGTTTGTAAAGTGTCTCAGGCCACGCCA
GAGTTTCTGAAGAATATTCGGTCAGTTCGAGACGCAGCGTCTGTCCCTCCTGAAGAGATGTCTC
CAGAATTCACAACTCTTCCAGAGTCTCATGGACATGCTCGGGATGCCTATTCCTTTGGAACATT
GGTGGAAAGCTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAG
CAGACCTTGCACACAGCCCTGCTGAATCCCACTCCACACTGTCGGCCCGCGCTCCGCACCTTAC
TGTCCCATGACTTCTTCAGAAATGATTTTCTAGAAATTGTGAATTTCTTGAAAAGCTTAACACT
GAAGAGTGAAGAGGAAAAAACTGAATTCTTCAAATTTCTGCTGGACAGAGTCAGCTGCTTGTCC
GAGGAGTTAATAGCGTCGAGGCTGGTGCCACTTCTGCTTAATCAGTTGGTGTTTGCAGAGCCAG
TAGCTGTTAAGAGTTTTCTTCCTCATCTGCTTGGCCCCAAAAAAGACAAAGAACAAGGAGAAAC
CTGTTGCCTGCTCTCGCCGGCCTTGTTCCAGTTGCGGGTGATCCCTGTGCTCCTCCAGTTGTTT
GAGGTTCACGAGGAACATGTGCGGATGGTGCTCCTGTCTCACATTGAGGCCTACGTGGAGCACT
TTACTCAGGAGCAGCTGAAAAAAGTCATTTTGCCACAGGTGTTACTGGGCCTGCGTGATACCAG
CAGTTCCATTGTGGCAGTTACTCTTCATAGCCTTGCAGTGCTGGTCTCTCTGCTTGGACCAGAA
GTGGTTGTGGGAGGACAGAGAACCAAGATCTTTAAACGTACTGCCCCGAGTTTTACTAAAATGA
CTGATCTTTCCCCAGAAGATTCTCCCAGGCATGTGGTCTGCAGCCGGAACAGTCAGATCTTGCC
CACCTTGGAGAGTGCCTCCTCTAGCACATTCCCAAAAGGTTTCTCTTCTGGCACCCTCCCCATC
AACAGCAAGGAGCACATACAGCGAGATTACTACAGTACCTGTTTATACACAGGTGACCAGTTTT
CTCAGTCTATTAAGTTTCCCATGAATGGAATCTCAGATGTGAAAAATACTTCAGGGAACACTGA
AAATTTCTCATCAGACTCTAAAAAGTCTGAGGAGTGGCCTGACTGGACTGAGCCTGAGGAGCCA
GAGAACCAAACTGTCAGCGTGCACATTTGGCCTACAGAACCCTGTGATGCTGCCGAGTCCCAGT
GCACTGACCTCATTGCAGAAGCAGTGGCCTGGGAAGCCTGTGCACCCAGCAGCTTAGGTACTCA
AACAAGCCTAGGACCCAGTGTCTCTGTGCCAGTGCCTCATACCTCTGGGGAGCAGAAGCCCACT
CTTGCTTTGCATCCACTCACTGAACCAGCCATGCCTCTGAAATCAACTCTCCTCCCAAATGTAC
AAAGCAGAGAAGAGCCAGACCAGACCAAGCCACCAAAAGGGCTGTCACAAGAAAGGCCTCTTAA
AGTTCAGTCAGAACTTGGTTTGGGAGAAGAGTTTACCATAACGGTTAAAAAGAAGCCAATAGAA
GATCCTGAGTTGGACTGGTTTGCTGATATGATCCCAGAAATAAAGCCTTCAGCTGCTTTTCTTA
TTTTACCTGAACTGAGAACAGAAATGATGGTCCCCAGCAAGGATGGTGTCTCTCCAGTGATGCA
GTTTTCCTCAAAATTTGCTGCAGCAGAAATGACTGAGGGAGAGGCTGAAGGCTGGGGAGAAGAA
GGGGAGCTGAACTGGGAAGATAGTAACTGGTGACAATGGACAATATCCTGACAGTTGAAAAGTG
TCAAACCCAGTCTGTCTGGTGACAGCAGTGCAGTCCGTTCAGCATTCACCCTGGAGCACACTGT
GTT

hide sequence

RefSeq Acc Id:

XM_005398181 ⟹ XP_005398238

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955462	7,443,841 - 7,477,432 (+)	NCBI

Sequence:

show sequence

ATTTCCGGGCCGTCTCCTCGGAGTCCGAGCGGCCCGGCCCGGGTGAGGTTGTAGGTGTTGTGGC
CGCTGGCTTAGGGGAGGCGAAGGGGCGCGAGCCCAGGAGACGCTCTGACCTCCCCGCTGCCCGC
AGGTCTGTTTGCTTTGAGGAGGAGCTGAAGACTGCCCCACGGCATAAGGGATGGGATCAGAGAA
TAGTGCTTTAAAGAGCTATACACTGAAAGAACCACCATTTACTTTACCCGCTGGACTTGCTGTT
TATCCTGCTGTACTGCAAGATGGCAAATTTGCTTCAGTTTTTGTGTATAAGAGAGAAAATGAAG
ACAAAGTTAATAAAGCTGCCAAGCACTTGAAGACCCTTCGTCACCCTTGCTTGCTAAGATTTTT
ATCTTGTACTGTGGAACCAGACGGCATTCACCTTGTCACTGAGCGAGTGCAGCCTCTGGAAGTG
GCCTTGGAAACGCTGTCTGCCGCAGAGGTCTGTGCTGGCATTTATGACATACTGCTGGCACTGG
TCTTCCTTCACGACAGGGGACACCTAACACACAACAATGTCTGCTTAGCCTCTGTGTTTGTGAG
TGAAGATGGGCACTGGAAGCTAGGAGGAATGGAGACTGTTTGTAAAGTGTCTCAGGCCACGCCA
GAGTTTCTGAAGAATATTCGGTCAGTTCGAGACGCAGCGTCTGTCCCTCCTGAAGAGATGTCTC
CAGAATTCACAACTCTTCCAGAGTCTCATGGACATGCTCGGGATGCCTATTCCTTTGGAACATT
GGTGGAAAGCTTGCTCACAATCTTAAATGAACAGGTTTCAGCGGATGTTCTCTCCAGCTTTCAG
CAGACCTTGCACACAGCCCTGCTGAATCCCACTCCACACTGTCGGCCCGCGCTCCGCACCTTAC
TGTCCCATGACTTCTTCAGAAATGATTTTCTAGAAATTGTGAATTTCTTGAAAAGCTTAACACT
GAAGAGTGAAGAGGAAAAAACTGAATTCTTCAAATTTCTGCTGGACAGAGTCAGCTGCTTGTCC
GAGGAGTTAATAGCGTCGAGGCTGGTGCCACTTCTGCTTAATCAGTTGGTGTTTGCAGAGCCAG
TAGCTGTTAAGAGTTTTCTTCCTCATCTGCTTGGCCCCAAAAAAGACAAAGAACAAGGAGAAAC
CTGTTGCCTGCTCTCGCCGGCCTTGTTCCAGTTGCGGGTGATCCCTGTGCTCCTCCAGTTGTTT
GAGGTTCACGAGGAACATGTGCGGATGGTGCTCCTGTCTCACATTGAGGCCTACGTGGAGCACT
TTACTCAGGAGCAGCTGAAAAAAGTCATTTTGCCACAGGTGTTACTGGGCCTGCGTGATACCAG
CAGTTCCATTGTGGCAGTTACTCTTCATAGCCTTGCAGTGCTGGTCTCTCTGCTTGGACCAGAA
GTGGTTGTGGGAGGACAGAGAACCAAGATCTTTAAACGTACTGCCCCGAGTTTTACTAAAATGA
CTGATCTTTCCCCAGAAGGTGACCAGTTTTCTCAGTCTATTAAGTTTCCCATGAATGGAATCTC
AGATGTGAAAAATACTTCAGGGAACACTGAAAATTTCTCATCAGACTCTAAAAAGTCTGAGGAG
TGGCCTGACTGGACTGAGCCTGAGGAGCCAGAGAACCAAACTGTCAGCGTGCACATTTGGCCTA
CAGAACCCTGTGATGCTGCCGAGTCCCAGTGCACTGACCTCATTGCAGAAGCAGTGGCCTGGGA
AGCCTGTGCACCCAGCAGCTTAGGTACTCAAACAAGCCTAGGACCCAGTGTCTCTGTGCCAGTG
CCTCATACCTCTGGGGAGCAGAAGCCCACTCTTGCTTTGCATCCACTCACTGAACCAGCCATGC
CTCTGAAATCAACTCTCCTCCCAAATGTACAAAGCAGAGAAGAGCCAGACCAGACCAAGCCACC
AAAAGGGCTGTCACAAGAAAGGCCTCTTAAAGTTCAGTCAGAACTTGGTTTGGGAGAAGAGTTT
ACCATAACGGTTAAAAAGAAGCCAATAGAAGATCCTGAGTTGGACTGGTTTGCTGATATGATCC
CAGAAATAAAGCCTTCAGCTGCTTTTCTTATTTTACCTGAACTGAGAACAGAAATGATGGTCCC
CAGCAAGGATGGTGTCTCTCCAGTGATGCAGTTTTCCTCAAAATTTGCTGCAGCAGAAATGACT
GAGGGAGAGGCTGAAGGCTGGGGAGAAGAAGGGGAGCTGAACTGGGAAGATAGTAACTGGTGAC
AATGGACGTGAGTTAAACTTTAGGAAGGAATCCTTTTTTAAAAAAATGAGTACCTCAGATGCAG
GCTGTATGGACAAAAAAACCCCAAAGCAGCCTCTTTTCCCTGTCCCAGGGGCTCTTTTCCAGTC
TGTGCCAACTGCAGGGTGAGATGATGCTCGAGTGCTGGCTGAGCCCAGGTGGCCAAGGGCTCAC
AGGGCTGGCTTCTAGGAGGGCAAGCCTGGGTGCATTCAGCAGAGGCCAGTCCACGAAGAGCAAG
AAGCTGAGGAAAGGTCGATTTACTGCTTTAAAAAAGCAAGAAAATAAATATAAAAAGTCAAGCT
GTTTAGCTTAATTTTGTGCCATTTCTTTAACGGTAAGAAAAATAAGTTCTATTATGTAATACAA
CTTACTAAAAAAAATTAGCTATAAATTATAAATGACTTAAGGTTTCCTTAGGCAGCTTATTTAT
TTGTTTACAGTTGTACTTTCTGAGTGGAAGGTCCTCTGTGGACCTGGGCAGTTACTGTTTTACA
TGTACTACCTTGTACCAAAGGTCTTAATGAGAAATATCACCCCCAATCCTGTTCTCTAAATGTC
AAATAAAGACTATTTTCACTAGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005398233	(Get FASTA)	NCBI Sequence Viewer
	XP_005398235	(Get FASTA)	NCBI Sequence Viewer
	XP_005398236	(Get FASTA)	NCBI Sequence Viewer
	XP_005398237	(Get FASTA)	NCBI Sequence Viewer
	XP_005398238	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000009589
	ENSCLAP00000009589.1
	ENSCLAP00000009590
	ENSCLAP00000009590.1

RefSeq Acc Id:	XP_005398238 ⟸ XM_005398181
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2V3U9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSENSALKSYTLKEPPFTLPAGLAVYPAVLQDGKFASVFVYKRENEDKVNKAAKHLKTLRHPC LLRFLSCTVEPDGIHLVTERVQPLEVALETLSAAEVCAGIYDILLALVFLHDRGHLTHNNVCLA SVFVSEDGHWKLGGMETVCKVSQATPEFLKNIRSVRDAASVPPEEMSPEFTTLPESHGHARDAY SFGTLVESLLTILNEQVSADVLSSFQQTLHTALLNPTPHCRPALRTLLSHDFFRNDFLEIVNFL KSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPHLLGPKKDK EQGETCCLLSPALFQLRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLG LRDTSSSIVAVTLHSLAVLVSLLGPEVVVGGQRTKIFKRTAPSFTKMTDLSPEGDQFSQSIKFP MNGISDVKNTSGNTENFSSDSKKSEEWPDWTEPEEPENQTVSVHIWPTEPCDAAESQCTDLIAE AVAWEACAPSSLGTQTSLGPSVSVPVPHTSGEQKPTLALHPLTEPAMPLKSTLLPNVQSREEPD QTKPPKGLSQERPLKVQSELGLGEEFTITVKKKPIEDPELDWFADMIPEIKPSAAFLILPELRT EMMVPSKDGVSPVMQFSSKFAAAEMTEGEAEGWGEEGELNWEDSNW hide sequence

RefSeq Acc Id:	XP_005398237 ⟸ XM_005398180
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YMI2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSENSALKSYTLKEPPFTLPAGLAVYPAVLQDGKFASVFVYKRENEDKVNKAAKHLKTLRHPC LLRFLSCTVEPDGIHLVTERVQPLEVALETLSAAEVCAGIYDILLALVFLHDRGHLTHNNVCLA SVFVSEDGHWKLGGMETVCKVSQATPEFLKNIRSVRDAASVPPEEMSPEFTTLPESHGHARDAY SFGTLVESLLTILNEQVSADVLSSFQQTLHTALLNPTPHCRPALRTLLSHDFFRNDFLEIVNFL KSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPHLLGPKKDK EQGETCCLLSPALFQLRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLG LRDTSSSIVAVTLHSLAVLVSLLGPEVVVGGQRTKIFKRTAPSFTKMTDLSPEDSPRHVVCSRN SQILPTLESASSSTFPKGFSSGTLPINSKEHIQRDYYSTCLYTGDQFSQSIKFPMNGISDVKNT SGNTENFSSDSKKSEEWPDWTEPEEPENQTVSVHIWPTEPCDAAESQCTDLIAEAVAWEACAPS SLGTQTSLGPSVSVPVPHTSGEQKPTLALHPLTEPAMPLKSTLLPNVQSREEPDQTKPPKGLSQ ERPLKVQSELGLGEEFTITVKKKPIEDPELDWFADMIPEIKPSAAFLILPELRTEMMVPSKDGV SPVMQFSSKFAAAEMTEGEAEGWGEEGELNWEDSNW hide sequence

RefSeq Acc Id:	XP_005398233 ⟸ XM_005398176
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YMI2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSENSALKSYTLKEPPFTLPAGLAVYPAVLQDGKFASVFVYKRENEDKVNKAAKHLKTLRHPC LLRFLSCTVEPDGIHLVTERVQPLEVALETLSAAEVCAGIYDILLALVFLHDRGHLTHNNVCLA SVFVSEDGHWKLGGMETVCKVSQATPEFLKNIRSVRDAASVPPEEMSPEFTTLPESHGHARDAY SFGTLVESLLTILNEQVSADVLSSFQQTLHTALLNPTPHCRPALRTLLSHDFFRNDFLEIVNFL KSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPHLLGPKKDK EQGETCCLLSPALFQLRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLG LRDTSSSIVAVTLHSLAVLVSLLGPEVVVGGQRTKIFKRTAPSFTKMTDLSPEDSPRHVVCSRN SQILPTLESASSSTFPKGFSSGTLPINSKEHIQRDYYSTCLYTGDQFSQSIKFPMNGISDVKNT SGNTENFSSDSKKSEEWPDWTEPEEPENQTVSVHIWPTEPCDAAESQCTDLIAEAVAWEACAPS SLGTQTSLGPSVSVPVPHTSGEQKPTLALHPLTEPAMPLKSTLLPNVQSREEPDQTKPPKGLSQ ERPLKVQSELGLGEEFTITVKKKPIEDPELDWFADMIPEIKPSAAFLILPELRTEMMVPSKDGV SPVMQFSSKFAAAEMTEGEAEGWGEEGELNWEDSNW hide sequence

RefSeq Acc Id:	XP_005398235 ⟸ XM_005398178
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YMI2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSENSALKSYTLKEPPFTLPAGLAVYPAVLQDGKFASVFVYKRENEDKVNKAAKHLKTLRHPC LLRFLSCTVEPDGIHLVTERVQPLEVALETLSAAEVCAGIYDILLALVFLHDRGHLTHNNVCLA SVFVSEDGHWKLGGMETVCKVSQATPEFLKNIRSVRDAASVPPEEMSPEFTTLPESHGHARDAY SFGTLVESLLTILNEQVSADVLSSFQQTLHTALLNPTPHCRPALRTLLSHDFFRNDFLEIVNFL KSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPHLLGPKKDK EQGETCCLLSPALFQLRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLG LRDTSSSIVAVTLHSLAVLVSLLGPEVVVGGQRTKIFKRTAPSFTKMTDLSPEDSPRHVVCSRN SQILPTLESASSSTFPKGFSSGTLPINSKEHIQRDYYSTCLYTGDQFSQSIKFPMNGISDVKNT SGNTENFSSDSKKSEEWPDWTEPEEPENQTVSVHIWPTEPCDAAESQCTDLIAEAVAWEACAPS SLGTQTSLGPSVSVPVPHTSGEQKPTLALHPLTEPAMPLKSTLLPNVQSREEPDQTKPPKGLSQ ERPLKVQSELGLGEEFTITVKKKPIEDPELDWFADMIPEIKPSAAFLILPELRTEMMVPSKDGV SPVMQFSSKFAAAEMTEGEAEGWGEEGELNWEDSNW hide sequence

RefSeq Acc Id:	XP_005398236 ⟸ XM_005398179
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YMI2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSENSALKSYTLKEPPFTLPAGLAVYPAVLQDGKFASVFVYKRENEDKVNKAAKHLKTLRHPC LLRFLSCTVEPDGIHLVTERVQPLEVALETLSAAEVCAGIYDILLALVFLHDRGHLTHNNVCLA SVFVSEDGHWKLGGMETVCKVSQATPEFLKNIRSVRDAASVPPEEMSPEFTTLPESHGHARDAY SFGTLVESLLTILNEQVSADVLSSFQQTLHTALLNPTPHCRPALRTLLSHDFFRNDFLEIVNFL KSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPHLLGPKKDK EQGETCCLLSPALFQLRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLG LRDTSSSIVAVTLHSLAVLVSLLGPEVVVGGQRTKIFKRTAPSFTKMTDLSPEDSPRHVVCSRN SQILPTLESASSSTFPKGFSSGTLPINSKEHIQRDYYSTCLYTGDQFSQSIKFPMNGISDVKNT SGNTENFSSDSKKSEEWPDWTEPEEPENQTVSVHIWPTEPCDAAESQCTDLIAEAVAWEACAPS SLGTQTSLGPSVSVPVPHTSGEQKPTLALHPLTEPAMPLKSTLLPNVQSREEPDQTKPPKGLSQ ERPLKVQSELGLGEEFTITVKKKPIEDPELDWFADMIPEIKPSAAFLILPELRTEMMVPSKDGV SPVMQFSSKFAAAEMTEGEAEGWGEEGELNWEDSNW hide sequence

RefSeq Acc Id:

ENSCLAP00000009590 ⟸ ENSCLAT00000009719

RefSeq Acc Id:

ENSCLAP00000009589 ⟸ ENSCLAT00000009718

Protein Domains

Protein kinase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000006650	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000009718	ENTREZGENE
	ENSCLAT00000009718.1	UniProtKB/TrEMBL
	ENSCLAT00000009719	ENTREZGENE
	ENSCLAT00000009719.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	HEAT_type_2	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/TrEMBL
NCBI Gene	Scyl3	ENTREZGENE
PANTHER	PROTEIN-ASSOCIATING WITH THE CARBOXYL-TERMINAL DOMAIN OF EZRIN	UniProtKB/TrEMBL
	SCY1-RELATED S/T PROTEIN KINASE-LIKE	UniProtKB/TrEMBL
Pfam	PK_Tyr_Ser-Thr	UniProtKB/TrEMBL
PROSITE	HEAT_REPEAT	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
SMART	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
	SSF56112	UniProtKB/TrEMBL
UniProt	A0A8C2V3U9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YMI2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Scyl3	SCY1 like pseudokinase 3		SCY1-like, kinase-like 3	Symbol and/or name change	5135510	APPROVED
2015-08-25	Scyl3	SCY1-like, kinase-like 3		SCY1-like 3 (S. cerevisiae)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar