Znf697 (zinc finger protein 697) - Rat Genome Database

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Gene: Znf697 (zinc finger protein 697) Chinchilla lanigera
Analyze
Symbol: Znf697
Name: zinc finger protein 697
RGD ID: 8818796
Description: ASSOCIATED WITH genetic disease (ortholog); Hajdu-Cheney syndrome (ortholog); PHGDH deficiency (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543522,660,234 - 22,680,527 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543522,660,287 - 22,693,591 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Znf697
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543522,660,234 - 22,680,527 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543522,660,287 - 22,693,591 (-)NCBIChiLan1.0ChiLan1.0
ZNF697
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381119,619,377 - 119,648,266 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1119,619,377 - 119,648,266 (-)EnsemblGRCh38hg38GRCh38
GRCh371120,162,000 - 120,190,889 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361119,963,523 - 119,991,913 (-)NCBINCBI36Build 36hg18NCBI36
Celera1118,392,735 - 118,421,117 (-)NCBICelera
Cytogenetic Map1p12NCBI
HuRef1118,020,283 - 118,048,676 (-)NCBIHuRef
CHM1_11120,277,510 - 120,305,895 (-)NCBICHM1_1
T2T-CHM13v2.01119,632,580 - 119,661,937 (-)NCBIT2T-CHM13v2.0
Zfp697
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39398,289,278 - 98,508,893 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl398,289,777 - 98,661,128 (+)EnsemblGRCm39 Ensembl
GRCm38398,381,962 - 98,431,951 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl398,382,461 - 98,753,812 (+)EnsemblGRCm38mm10GRCm38
MGSCv37398,186,404 - 98,235,872 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36398,467,953 - 98,517,112 (+)NCBIMGSCv36mm8
Celera399,781,228 - 99,830,126 (+)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.75NCBI
Zfp697
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82188,659,294 - 188,692,611 (+)NCBIGRCr8
mRatBN7.22185,970,562 - 186,003,884 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2185,970,576 - 186,001,041 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2193,645,104 - 193,649,320 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02191,454,366 - 191,458,555 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02186,277,676 - 186,281,890 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02200,546,954 - 200,579,926 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2200,572,502 - 200,576,694 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2200,603,426 - 200,607,618 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02220,022,472 - 220,055,448 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42193,237,465 - 193,241,657 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12193,193,065 - 193,204,413 (+)NCBI
Celera2178,458,701 - 178,491,677 (+)NCBICelera
Cytogenetic Map2q34NCBI
ZNF697
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21112,221,428 - 112,271,929 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11111,845,481 - 111,874,830 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0182,898,848 - 82,927,622 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11117,896,368 - 117,925,169 (+)NCBIpanpan1.1PanPan1.1panPan2
ZNF697
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11756,573,771 - 56,604,278 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1756,576,916 - 56,578,898 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1756,575,930 - 56,603,907 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1756,222,503 - 56,252,762 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01757,446,411 - 57,476,689 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1757,448,570 - 57,476,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11756,482,658 - 56,512,932 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01756,515,338 - 56,544,766 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01757,104,049 - 57,134,523 (-)NCBIUU_Cfam_GSD_1.0
Znf697
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505810,131,161 - 10,160,482 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366274,328,407 - 4,334,969 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366274,330,997 - 4,357,575 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF697
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4101,521,763 - 101,552,753 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14101,520,252 - 101,552,266 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24111,510,612 - 111,542,617 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF697
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12014,144,704 - 14,173,417 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2014,144,990 - 14,170,099 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603816,776,024 - 16,804,909 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf697
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477215,135,564 - 15,142,086 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477215,135,558 - 15,171,490 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000024660   ⟹   ENSCLAP00000024425
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543522,660,234 - 22,680,527 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000024661   ⟹   ENSCLAP00000024426
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543522,660,234 - 22,669,269 (-)Ensembl
RefSeq Acc Id: XM_005389086   ⟹   XP_005389143
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543522,660,287 - 22,693,591 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005389087   ⟹   XP_005389144
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543522,660,287 - 22,666,471 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013516560   ⟹   XP_013372014
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543522,660,287 - 22,680,834 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013516562   ⟹   XP_013372016
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543522,660,287 - 22,690,113 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005389143   ⟸   XM_005389086
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005389144   ⟸   XM_005389087
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_013372016   ⟸   XM_013516562
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013372014   ⟸   XM_013516560
- Peptide Label: isoform X1
- UniProtKB: A0A8C2W305 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000024425   ⟸   ENSCLAT00000024660
RefSeq Acc Id: ENSCLAP00000024426   ⟸   ENSCLAT00000024661
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016771 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000024660 ENTREZGENE
  ENSCLAT00000024660.1 UniProtKB/TrEMBL
  ENSCLAT00000024661 ENTREZGENE
  ENSCLAT00000024661.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene Znf697 ENTREZGENE
PANTHER REDUCED EXPRESSION 2-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 200 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8C2W305 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2W3N7_CHILA UniProtKB/TrEMBL