Kplce (KPRP N-terminal and LCE C-terminal like protein)

Gene: Kplce (KPRP N-terminal and LCE C-terminal like protein) Chinchilla lanigera

Analyze

Symbol:

Kplce

Name:

KPRP N-terminal and LCE C-terminal like protein (Ensembl:chromosome unknown open reading frame, human C1orf68)

RGD ID:

8818746

Description:

ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); immunodeficiency 42 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chromosome unknown open reading frame, human C1orf68; LOC102014726; skin-specific protein 32

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955592	681,046 - 681,930 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955592	680,843 - 682,874 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Kplce
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955592	681,046 - 681,930 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955592	680,843 - 682,874 (-)	NCBI	ChiLan1.0	ChiLan1.0

KPLCE
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	152,719,522 - 152,720,470 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	152,719,522 - 152,720,470 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	152,691,998 - 152,692,946 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	150,958,622 - 150,959,529 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	125,770,080 - 125,770,987 (+)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	124,065,440 - 124,066,347 (+)	NCBI		HuRef
CHM1_1	1	154,087,351 - 154,088,258 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	151,856,064 - 151,857,012 (+)	NCBI		T2T-CHM13v2.0

Kplce
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	92,775,666 - 92,777,512 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	92,775,666 - 92,777,523 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	92,868,359 - 92,870,205 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	92,868,359 - 92,870,216 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	92,672,281 - 92,674,127 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	92,672,281 - 92,673,296 (-)	NCBI		MGSCv36	mm8
Celera	3	94,212,570 - 94,214,416 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	40.14	NCBI

Kplce
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	181,177,090 - 181,179,042 (-)	NCBI		GRCr8
mRatBN7.2	2	178,481,482 - 178,483,434 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	178,481,373 - 178,483,424 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	2	193,183,789 - 193,185,796 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	193,183,954 - 193,184,942 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	211,686,894 - 211,688,047 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	185,892,083 - 185,893,165 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	2	171,777,244 - 171,779,180 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

KPLCE
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	97,124,141 - 97,125,089 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	96,875,315 - 96,876,263 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	128,064,008 - 128,064,950 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	131,694,686 - 131,695,626 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	131,694,686 - 131,695,438 (+)	Ensembl	panpan1.1		panPan2

KPLCE
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	61,541,989 - 61,543,947 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	61,541,477 - 61,543,761 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	61,000,214 - 61,002,188 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	62,567,501 - 62,569,494 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	17	61,393,611 - 61,395,553 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	61,488,143 - 61,490,108 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	62,214,847 - 62,216,825 (+)	NCBI		UU_Cfam_GSD_1.0

Kplce
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	23,695,077 - 23,696,809 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	2,725,518 - 2,726,994 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	2,726,139 - 2,726,981 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KPLCE
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	96,775,172 - 96,775,975 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	96,774,991 - 96,775,975 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	105,708,334 - 105,709,318 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KPLCE
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	10,991,430 - 10,994,306 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	10,993,289 - 10,994,104 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	10,471,368 - 10,472,183 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kplce
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	210,725 - 211,618 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	210,725 - 211,797 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005414624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01076320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCC01015742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000004019 ⟹ ENSCLAP00000003943

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955592	681,046 - 681,930 (-)	Ensembl

RefSeq Acc Id:

XM_005414624 ⟹ XP_005414681

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955592	680,843 - 682,874 (-)	NCBI

Sequence:

show sequence

CTCCAACTGTCAGTTCCTTAAATCTTTAGCCTGTTCCAGTCTTGTTCCTGCCAGGAAAGAAGAT
TTTGCAAAACCATAGCAAGATGTATGACCAGCAGAAACAGCCACAGTTTCTTCCCTCTTGCGTG
AAAGGTTCAGGACTCGGGGCTGCACAAGGTGCAGGTGGTGCCTCTGTGAAAAGCCAGGCTCCAA
GCCAGTCCCAGACTGTCCCTGCGAATGGCCCTGCTCTCTGCCAGGCTCAAACTGCCTTTGTGAC
AGGGCCTACCTCTGGCCAGCCTCAAACTGTCTATGTGACAGGCCCTATTTCCGGCCAAGCTCAA
GCCTTCATGAATTACCCAGCTTCAGCTCCAGCTCCAACTCAAACCTATGTGAAATACCAAGTTC
CATGGCAGACTCAAACCTATGTGAAGGGCCCAGCTCCTTGCCAGACCAAAACCTTTGTGAAATG
CCCAGCCCCCTGCCAGACATATGTGAAGTGCCCACCTCCATGCCAGATGACCTATGTGAAGTGC
GCAGCACCCTCCCAGACAACTTACGTGCAATGCCCAGCTCCGTGCCAGACGACCTATGTCAAAC
GTCCAGCTCCCTACCAGACCCAGACATATTATGTCCAGTACCCTTCTTCTGGCCAGACCTACTA
CTCTCAAGCTTCTGCGAGTGGCTCAGCCTCCCAGGGCTGTGTTCCTGACCCATGCTCTGCTCCC
TGTTCCACCAGCTATTGCTGTCTCGCTCCCCGGACCTTCGGGGTCAGTCCTCTGAGACGTTGGA
TCCAGCGGCCCCAGGGCTGCAACACAGGATCATCCGGCTGCTGTGAGGATTCTGGATGCTGCGG
CTCTGGGTGCAGCAATTCTGGGTGCTGTGGCTCTGGGGGATGCTGTGGCTCAGGGGGGTGCTGC
TGTTTGGGAATTATCCCCATGAGGTCCCGAGGTCCTGCATGCTGTGACCGTGAGGATGACTGCT
GCTGTTAAATACAAAAGGACAGACCTGCTCCGGGATTCACTACCAGGCTATGCCCTTTGAAACC
TCACCAGCCTTCAGCCCCTTCCCTGTCATTCTAGCAATGTAGAACCTCATCAATTTCCCTGCAC
ACTTTGCTTCTTTATCAAGGCATCCTGCCAGAGTTAGTGCAAATCCCAAACTTTGGCAAGAATA
AAGCTCTGAATGTAAAGCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005414681	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000003943.1

RefSeq Acc Id:

XP_005414681 ⟸ XM_005414624

- UniProtKB:

A0A8C2UPJ3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MYDQQKQPQFLPSCVKGSGLGAAQGAGGASVKSQAPSQSQTVPANGPALCQAQTAFVTGPTSGQ
PQTVYVTGPISGQAQAFMNYPASAPAPTQTYVKYQVPWQTQTYVKGPAPCQTKTFVKCPAPCQT
YVKCPPPCQMTYVKCAAPSQTTYVQCPAPCQTTYVKRPAPYQTQTYYVQYPSSGQTYYSQASAS
GSASQGCVPDPCSAPCSTSYCCLAPRTFGVSPLRRWIQRPQGCNTGSSGCCEDSGCCGSGCSNS
GCCGSGGCCGSGGCCCLGIIPMRSRGPACCDREDDCCC

hide sequence

RefSeq Acc Id:

ENSCLAP00000003943 ⟸ ENSCLAT00000004019

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000002804	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004019.1	UniProtKB/TrEMBL
NCBI Gene	LOC102014726	ENTREZGENE
PANTHER	G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	SKIN-SPECIFIC PROTEIN 32	UniProtKB/TrEMBL
UniProt	A0A8C2UPJ3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-03-21	Kplce	KPRP N-terminal and LCE C-terminal like protein	LOC102014726	chromosome unknown open reading frame, human C1orf68	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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