Lmod3 (leiomodin 3) - Rat Genome Database

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Gene: Lmod3 (leiomodin 3) Chinchilla lanigera
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Symbol: Lmod3
Name: leiomodin 3
RGD ID: 8815055
Description: ENCODES a protein that exhibits actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin nucleation (ortholog); positive regulation of skeletal muscle fiber development (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH nemaline myopathy 10 (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); M band (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: leiomodin 3 (fetal); leiomodin-3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542118,728,692 - 18,743,974 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542118,728,993 - 18,744,326 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References


Genomics

Comparative Map Data
Lmod3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542118,728,692 - 18,743,974 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542118,728,993 - 18,744,326 (+)NCBIChiLan1.0ChiLan1.0
LMOD3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl369,106,065 - 69,123,032 (-)EnsemblGRCh38hg38GRCh38
GRCh38369,106,065 - 69,122,595 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37369,155,216 - 69,171,746 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36369,238,730 - 69,254,407 (-)NCBINCBI36hg18NCBI36
Celera369,084,149 - 69,099,857 (-)NCBI
Cytogenetic Map3p14.1NCBI
HuRef369,157,117 - 69,172,666 (-)NCBIHuRef
CHM1_1369,107,257 - 69,122,963 (-)NCBICHM1_1
Lmod3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,215,491 - 97,230,137 (-)NCBIGRCm39mm39
GRCm39 Ensembl697,215,495 - 97,229,720 (-)Ensembl
GRCm38697,238,530 - 97,253,217 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,238,534 - 97,252,759 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,188,522 - 97,202,774 (-)NCBIGRCm37mm9NCBIm37
MGSCv36697,203,991 - 97,218,243 (-)NCBImm8
Celera699,097,915 - 99,112,153 (-)NCBICelera
Cytogenetic Map6D3NCBI
Lmod3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24129,843,964 - 129,858,684 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl4129,604,267 - 129,619,142 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04129,604,378 - 129,619,136 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04194,105,870 - 194,120,578 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44131,958,969 - 131,973,266 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4118,720,105 - 118,734,466 (-)NCBICelera
Cytogenetic Map4q34NCBI
LMOD3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1370,409,700 - 70,424,652 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl370,410,288 - 70,424,702 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0369,042,870 - 69,058,704 (-)NCBIMhudiblu_PPA_v0panPan3
LMOD3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12022,612,916 - 22,629,207 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2022,612,946 - 22,629,214 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2022,587,390 - 22,603,662 (+)NCBI
ROS_Cfam_1.02022,638,734 - 22,655,016 (+)NCBI
UMICH_Zoey_3.12022,333,633 - 22,349,893 (+)NCBI
UNSW_CanFamBas_1.02022,675,875 - 22,692,165 (+)NCBI
UU_Cfam_GSD_1.02022,746,668 - 22,762,961 (+)NCBI
Lmod3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049421,510,935 - 1,520,742 (+)NCBI
SpeTri2.0NW_0049366031,510,330 - 1,520,741 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LMOD3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11350,541,407 - 50,554,346 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21355,672,243 - 55,685,067 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LMOD3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12230,132,993 - 30,149,769 (-)NCBI
ChlSab1.1 Ensembl2230,135,153 - 30,148,740 (-)Ensembl
Vero_WHO_p1.0NW_023666041136,643,470 - 136,647,453 (+)NCBI
Lmod3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247733,686,669 - 3,702,986 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000008925   ⟹   ENSCLAP00000008797
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542118,728,692 - 18,743,974 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000008926   ⟹   ENSCLAP00000008798
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542118,728,692 - 18,743,974 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000008927   ⟹   ENSCLAP00000008799
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542118,728,692 - 18,738,892 (+)Ensembl
RefSeq Acc Id: ENSCLAT00000008928   ⟹   ENSCLAP00000008800
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495542118,729,417 - 18,743,974 (+)Ensembl
RefSeq Acc Id: XM_005383807   ⟹   XP_005383864
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542118,729,453 - 18,744,326 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005383808   ⟹   XP_005383865
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495542118,728,993 - 18,744,326 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005383864 (Get FASTA)   NCBI Sequence Viewer  
  XP_005383865 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005383865   ⟸   XM_005383808
- Sequence:
RefSeq Acc Id: XP_005383864   ⟸   XM_005383807
- Sequence:
RefSeq Acc Id: ENSCLAP00000008799   ⟸   ENSCLAT00000008927
RefSeq Acc Id: ENSCLAP00000008800   ⟸   ENSCLAT00000008928
RefSeq Acc Id: ENSCLAP00000008797   ⟸   ENSCLAT00000008925
RefSeq Acc Id: ENSCLAP00000008798   ⟸   ENSCLAT00000008926


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000006151 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000008798 ENTREZGENE
  ENSCLAP00000008800 ENTREZGENE
Ensembl Transcript ENSCLAT00000008926 ENTREZGENE
  ENSCLAT00000008928 ENTREZGENE
NCBI Gene Lmod3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Lmod3  leiomodin 3    leiomodin 3 (fetal)  Symbol and/or name change 5135510 APPROVED